| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yhiN [H]
Identifier: 238024936
GI number: 238024936
Start: 2010102
End: 2011319
Strand: Reverse
Name: yhiN [H]
Synonym: bglu_2g15910
Alternate gene names: 238024936
Gene position: 2011319-2010102 (Counterclockwise)
Preceding gene: 238024938
Following gene: 238024935
Centisome position: 71.14
GC content: 70.69
Gene sequence:
>1218_bases ATGGAACATTTCGATATCGCCGTGATCGGCGCGGGCGCCGCCGGCATGATGAGCGCGGCCGTGGCCGGACAACTCGGGCG CCGCGTGGTGCTGATCGATCATTCGCCGCGCCTGGCGGAAAAGATCCGGATCTCGGGCGGCGGCCGCTGCAACTTCACCA ACCTGAACGCCGGCCCCGACAACTATCTTTCACAGAATCCGCGCTTCTGCCGCTCGGCGCTGGCGCGCTACACGCCGCGC GACTTTCTCGCCCTGCTGGCGCGGCATCGCATCAGCTGGCACGAAAAACACAAGGGCCAGCTGTTCTGCGATCAGCTCAG CGACGGCATCATCGACGTGCTGAAGTCCGAATGCGACGCCGGCGGCATCGCCTGGCGGCGGCCGGTGGCGGTGGCAGCGG TGCGTCACGCCGAGGGCACCGGCTTCGCGCTCGACACGAACGCCGGCGCGATCGGGGCGAAGGCGCTGATCGTCGCCACG GGCGGGCTCTCGATCCCGAAGATCGGCGCGACCGATTTCGCCTACCGGCTCGCCAAGCAATTCGGCCACAAGCTGGTCGA CACGCGCCCGGCGCTGGTGCCGCTGACCTTCGCGGCCGCCGACTGGGCGCCGTTTGCGGCGCTGTCTGGCGTCTCGCTCG AAGTGCGGGTGGCGACCGGGGGGAGAAAGGACGGCGGCGAGTTCGTCGAGGATCTGCTGCTCACGCACCGCGGCCTGTCC GGCCCCGGCATCCTGCAGATCTCGAGCTATTGGCGTCCCGGCGAGCCGATCCACATCGACCTGCTGCCGCGCGAGGACGC CACCGCCGCGCTGCTCGAGGCCAAGTCGGGCTCGAAGCGGCAGATCGGCGCGCTGCTGTCGGAGTGGGTGCCCGCCCGGC TCGCCCAGGTCTGGCTCGAGACGCAGCGCGTTGCCTCCGACGCGCGGCTCGCCGACCTGCCGGACAAGGCGCTGCGCCAG GTGGGCGCGGCGCTGTCGCGCTGGACGCTGGTGCCCGACGGCACCGAGGGCTACCGCAAGGCCGAGGTGACCAAGGGCGG CGTCGACACGCGCGAGCTGTCGTCGGCGACGATGATGAGCGCGCGGGTGCCCGGCCTGTTCTTCATCGGCGAATCGGTCG ACGTGACGGGCTGGCTTGGCGGCTACAACTTCCAGTGGGCCTGGGCCTCGGGCGTGGCCGCCGGGCAGGCCGCGGCCGAA CTGACGGGAAGGACTTGA
Upstream 100 bases:
>100_bases CGGCATCGAGCGGATATTGCCGGTATTGCCGTGCGCGCGGCGCCGACCGTCGGCAGGCGGCAGGCGGGCAGCCGGGGCGA CGGCGGTTACAATCCGCGCC
Downstream 100 bases:
>100_bases CGGGATAGTGCATTTGTGCAATCCGTCTGCTATACTCCCTGATCTTTCTCCGTAAAACTCACTTTTCTGTGACGGGTCAT GACGATCATTCGCGTTAAAG
Product: FAD-dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MEHFDIAVIGAGAAGMMSAAVAGQLGRRVVLIDHSPRLAEKIRISGGGRCNFTNLNAGPDNYLSQNPRFCRSALARYTPR DFLALLARHRISWHEKHKGQLFCDQLSDGIIDVLKSECDAGGIAWRRPVAVAAVRHAEGTGFALDTNAGAIGAKALIVAT GGLSIPKIGATDFAYRLAKQFGHKLVDTRPALVPLTFAAADWAPFAALSGVSLEVRVATGGRKDGGEFVEDLLLTHRGLS GPGILQISSYWRPGEPIHIDLLPREDATAALLEAKSGSKRQIGALLSEWVPARLAQVWLETQRVASDARLADLPDKALRQ VGAALSRWTLVPDGTEGYRKAEVTKGGVDTRELSSATMMSARVPGLFFIGESVDVTGWLGGYNFQWAWASGVAAGQAAAE LTGRT
Sequences:
>Translated_405_residues MEHFDIAVIGAGAAGMMSAAVAGQLGRRVVLIDHSPRLAEKIRISGGGRCNFTNLNAGPDNYLSQNPRFCRSALARYTPR DFLALLARHRISWHEKHKGQLFCDQLSDGIIDVLKSECDAGGIAWRRPVAVAAVRHAEGTGFALDTNAGAIGAKALIVAT GGLSIPKIGATDFAYRLAKQFGHKLVDTRPALVPLTFAAADWAPFAALSGVSLEVRVATGGRKDGGEFVEDLLLTHRGLS GPGILQISSYWRPGEPIHIDLLPREDATAALLEAKSGSKRQIGALLSEWVPARLAQVWLETQRVASDARLADLPDKALRQ VGAALSRWTLVPDGTEGYRKAEVTKGGVDTRELSSATMMSARVPGLFFIGESVDVTGWLGGYNFQWAWASGVAAGQAAAE LTGRT >Mature_405_residues MEHFDIAVIGAGAAGMMSAAVAGQLGRRVVLIDHSPRLAEKIRISGGGRCNFTNLNAGPDNYLSQNPRFCRSALARYTPR DFLALLARHRISWHEKHKGQLFCDQLSDGIIDVLKSECDAGGIAWRRPVAVAAVRHAEGTGFALDTNAGAIGAKALIVAT GGLSIPKIGATDFAYRLAKQFGHKLVDTRPALVPLTFAAADWAPFAALSGVSLEVRVATGGRKDGGEFVEDLLLTHRGLS GPGILQISSYWRPGEPIHIDLLPREDATAALLEAKSGSKRQIGALLSEWVPARLAQVWLETQRVASDARLADLPDKALRQ VGAALSRWTLVPDGTEGYRKAEVTKGGVDTRELSSATMMSARVPGLFFIGESVDVTGWLGGYNFQWAWASGVAAGQAAAE LTGRT
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=405, Percent_Identity=49.1358024691358, Blast_Score=368, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 43169; Mature: 43169
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHFDIAVIGAGAAGMMSAAVAGQLGRRVVLIDHSPRLAEKIRISGGGRCNFTNLNAGPD CCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHEEEECCCCEEEECCCCCCCC NYLSQNPRFCRSALARYTPRDFLALLARHRISWHEKHKGQLFCDQLSDGIIDVLKSECDA HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHHCCC GGIAWRRPVAVAAVRHAEGTGFALDTNAGAIGAKALIVATGGLSIPKIGATDFAYRLAKQ CCCCCCCCHHHEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH FGHKLVDTRPALVPLTFAAADWAPFAALSGVSLEVRVATGGRKDGGEFVEDLLLTHRGLS HHHHHHCCCCCEEEEEEECCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC GPGILQISSYWRPGEPIHIDLLPREDATAALLEAKSGSKRQIGALLSEWVPARLAQVWLE CCCEEEEECCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TQRVASDARLADLPDKALRQVGAALSRWTLVPDGTEGYRKAEVTKGGVDTRELSSATMMS HHHHHCCCHHHCCCHHHHHHHHHHHHHCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHH ARVPGLFFIGESVDVTGWLGGYNFQWAWASGVAAGQAAAELTGRT HCCCEEEEECCCCEEEEEECCCCEEEEECCCCCCCHHHHHHCCCC >Mature Secondary Structure MEHFDIAVIGAGAAGMMSAAVAGQLGRRVVLIDHSPRLAEKIRISGGGRCNFTNLNAGPD CCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHEEEECCCCEEEECCCCCCCC NYLSQNPRFCRSALARYTPRDFLALLARHRISWHEKHKGQLFCDQLSDGIIDVLKSECDA HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHHCCC GGIAWRRPVAVAAVRHAEGTGFALDTNAGAIGAKALIVATGGLSIPKIGATDFAYRLAKQ CCCCCCCCHHHEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH FGHKLVDTRPALVPLTFAAADWAPFAALSGVSLEVRVATGGRKDGGEFVEDLLLTHRGLS HHHHHHCCCCCEEEEEEECCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC GPGILQISSYWRPGEPIHIDLLPREDATAALLEAKSGSKRQIGALLSEWVPARLAQVWLE CCCEEEEECCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TQRVASDARLADLPDKALRQVGAALSRWTLVPDGTEGYRKAEVTKGGVDTRELSSATMMS HHHHHCCCHHHCCCHHHHHHHHHHHHHCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHH ARVPGLFFIGESVDVTGWLGGYNFQWAWASGVAAGQAAAELTGRT HCCCEEEEECCCCEEEEEECCCCEEEEECCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]