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The map label for this gene is tcp [H]

Identifier: 238024908

GI number: 238024908

Start: 1962905

End: 1964626

Strand: Reverse

Name: tcp [H]

Synonym: bglu_2g15530

Alternate gene names: 238024908

Gene position: 1964626-1962905 (Counterclockwise)

Preceding gene: 238024909

Following gene: 238024907

Centisome position: 69.49

GC content: 67.07

Gene sequence:

>1722_bases
ATGAAAAACATGACTGTATCCACCCGCCTGATCGCCGGGTTCGGGTTGTTGACCGCGCTGTTGCTGGCAGTGGCGGCAAT
TGGCTTTTACGGGTTGTCTCAGTTGAATGGCACGCTGGACGATATCGCGCGCGTGAACAACACCGAGACGAAGCTGGCGA
ACCGGCTGCGCTCCTCGATACAGGATCGGGCGATCGCCGTGCGAAATTTGGCGCTGCTCAGCGACGCGCAGGACATGGCC
AAGGAGGCCGAGCGCATCAGCAAGCAGGAGCAGATCTATGCCGACGCGTACCAGAAGCTGTCGCAGATGTTCGCGGACGA
ACCCGGCACGACGGAGCGGGAGAAGACGCTCCTCGCCCAGCTCAAGCAGGACGAAGCGGCAGCCCTGCCGCCGCTGCGCA
AGGCCGCCCAGTTGGGCTTGTCGAACGACAGGGCCGGCGCGACCCAGGAACTGCTGCAGAATGCCAGGCCGCCGCAACGG
AAATGGCTGGCACGTGCGATCGAGCTGGCTGATTTCGAGGACCAGCTCAACGACCAGGCGCAGGGCAGCGCCGTGAGCCT
GTACTCGAGCGTGCGGGTACTGATCGCGGCCATCGTCGCGGCCTCGCTGCTGGTGGCGGCCGTGACCGCGGTCCTCATTA
CGCGCAGCATCCTGAGGCAGCTTGGCGGCGAACCCGGCCTCGCGCAGTCGGTGGCGGCGGAGATCGCCAATGGCAACCTG
ATGGTGGACCTGCATCTGAAGCCCGGCGATTCGACCAGCCTGATGGCCTCGCTGGAAGCGATGCGCGCCAGGCTGACCTC
GATCGTGCACGGCATCAAGACCTCGGCCGAATCCATCTCGGTTGCCGCCAACCAGGTTGCGCAGGGCAATGTGGATCTCT
CCCAGCGCACCGAGGAACAGGCGGCATCGCTCGAAGAGACGGCGGCCAGCATGGAGGAACTGACCTCGACGGTGAAGCAC
AACACCGACAATGCCCGGCAGGGCAGCACGCTCGCGGTCACGGCTTCGCAGACCGCTTCGTCGGGCGGTGACGTGGTCCG
GCAAGTGGTGGGCACCATGGATGACATCGCGTCGAGCTCGCGCAAGGTTGCCGAGATCATTTCCGTGATCGAGGGCATCG
CCTTCCAGACCAATATCCTGGCGCTCAACGCGGCGGTCGAGGCGGCGCGCGCAGGCGAGCAGGGGCGCGGCTTCGCGGTG
GTCGCCGGGGAGGTGCGCACGCTGGCGCAGCGCAGCGCGGTGGCGGCCAAGGAAATCAAGGAACTGATCGAGACGTCGGT
ATCGCATGTGGCAGCGGGCTCGCAATTGGTGGCCGGTGCCGGCACGACCATGGACGAGATCGTGCGCTCGGTGAAGCGGG
TCAGCGACATCATGGGCGAGATCGCGTCGGCGTCGGCGGAGCAGAGCACGGGAATCGAGCAGGTCAACGTGGCGGTGGCG
CAGATGGACGAGGTCACCCAGCAGAACGCGGCGCTGGTGGAGCAGGCCACGGCCGCGGCGCAGTCGATGGCGGATCAGGC
GGAAAATCTGCGGGCCACGGTGTCGATCTTCCGGGTCGATGCGAGGGCGCAGACGGAGCCCGCTGCCGCCGTGAAGCGGC
AGGTGAGCGTCGCGCCGAAGCAGGTCAAGCGCCGTCTCGAACCGGCACGGCTGCCGGCACGGGTGGCCGCGCCGGCGGCC
GCCGCGGCCGGGGCGGGAAACGGCGAGTGGGCCACGTTCTGA

Upstream 100 bases:

>100_bases
GACCGGGAAGTCGAGCACAGGGTCTTCCCACCCCTTCAGTCATTTTGCAGGCGGCCGTAAACAAGGTGGAAGAATGTTCC
GACACGGATTGGGAGCCGCA

Downstream 100 bases:

>100_bases
CGCGCAGGCACGAGCTGAGGCCGCGGCTTAGCGGGTCCAGCGATGCCGTGGCGGGTTCGGGCCCGAGGCGCGGCGGGTGG
CTGCGATCCCAGGCGGGCAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGTLDDIARVNNTETKLANRLRSSIQDRAIAVRNLALLSDAQDMA
KEAERISKQEQIYADAYQKLSQMFADEPGTTEREKTLLAQLKQDEAAALPPLRKAAQLGLSNDRAGATQELLQNARPPQR
KWLARAIELADFEDQLNDQAQGSAVSLYSSVRVLIAAIVAASLLVAAVTAVLITRSILRQLGGEPGLAQSVAAEIANGNL
MVDLHLKPGDSTSLMASLEAMRARLTSIVHGIKTSAESISVAANQVAQGNVDLSQRTEEQAASLEETAASMEELTSTVKH
NTDNARQGSTLAVTASQTASSGGDVVRQVVGTMDDIASSSRKVAEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRTLAQRSAVAAKEIKELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARAQTEPAAAVKRQVSVAPKQVKRRLEPARLPARVAAPAA
AAAGAGNGEWATF

Sequences:

>Translated_573_residues
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGTLDDIARVNNTETKLANRLRSSIQDRAIAVRNLALLSDAQDMA
KEAERISKQEQIYADAYQKLSQMFADEPGTTEREKTLLAQLKQDEAAALPPLRKAAQLGLSNDRAGATQELLQNARPPQR
KWLARAIELADFEDQLNDQAQGSAVSLYSSVRVLIAAIVAASLLVAAVTAVLITRSILRQLGGEPGLAQSVAAEIANGNL
MVDLHLKPGDSTSLMASLEAMRARLTSIVHGIKTSAESISVAANQVAQGNVDLSQRTEEQAASLEETAASMEELTSTVKH
NTDNARQGSTLAVTASQTASSGGDVVRQVVGTMDDIASSSRKVAEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRTLAQRSAVAAKEIKELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARAQTEPAAAVKRQVSVAPKQVKRRLEPARLPARVAAPAA
AAAGAGNGEWATF
>Mature_573_residues
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGTLDDIARVNNTETKLANRLRSSIQDRAIAVRNLALLSDAQDMA
KEAERISKQEQIYADAYQKLSQMFADEPGTTEREKTLLAQLKQDEAAALPPLRKAAQLGLSNDRAGATQELLQNARPPQR
KWLARAIELADFEDQLNDQAQGSAVSLYSSVRVLIAAIVAASLLVAAVTAVLITRSILRQLGGEPGLAQSVAAEIANGNL
MVDLHLKPGDSTSLMASLEAMRARLTSIVHGIKTSAESISVAANQVAQGNVDLSQRTEEQAASLEETAASMEELTSTVKH
NTDNARQGSTLAVTASQTASSGGDVVRQVVGTMDDIASSSRKVAEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRTLAQRSAVAAKEIKELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARAQTEPAAAVKRQVSVAPKQVKRRLEPARLPARVAAPAA
AAAGAGNGEWATF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=310, Percent_Identity=59.6774193548387, Blast_Score=302, Evalue=5e-83,
Organism=Escherichia coli, GI1788195, Length=344, Percent_Identity=55.2325581395349, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1788194, Length=352, Percent_Identity=51.7045454545455, Blast_Score=296, Evalue=3e-81,
Organism=Escherichia coli, GI1787690, Length=544, Percent_Identity=41.5441176470588, Blast_Score=271, Evalue=8e-74,
Organism=Escherichia coli, GI1789453, Length=401, Percent_Identity=34.1645885286783, Blast_Score=198, Evalue=8e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 60130; Mature: 60130

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00368 RIBORED_SMALL ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGTLDDIARVNNTETKLANRLRSSI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHH
QDRAIAVRNLALLSDAQDMAKEAERISKQEQIYADAYQKLSQMFADEPGTTEREKTLLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LKQDEAAALPPLRKAAQLGLSNDRAGATQELLQNARPPQRKWLARAIELADFEDQLNDQA
HHHCHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
QGSAVSLYSSVRVLIAAIVAASLLVAAVTAVLITRSILRQLGGEPGLAQSVAAEIANGNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCE
MVDLHLKPGDSTSLMASLEAMRARLTSIVHGIKTSAESISVAANQVAQGNVDLSQRTEEQ
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AASLEETAASMEELTSTVKHNTDNARQGSTLAVTASQTASSGGDVVRQVVGTMDDIASSS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
RKVAEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAVAAKEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
HHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHH
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARAQTEPAAAVKRQVSVAPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCHH
QVKRRLEPARLPARVAAPAAAAAGAGNGEWATF
HHHHCCCHHCCCHHHHCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGTLDDIARVNNTETKLANRLRSSI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHH
QDRAIAVRNLALLSDAQDMAKEAERISKQEQIYADAYQKLSQMFADEPGTTEREKTLLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LKQDEAAALPPLRKAAQLGLSNDRAGATQELLQNARPPQRKWLARAIELADFEDQLNDQA
HHHCHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
QGSAVSLYSSVRVLIAAIVAASLLVAAVTAVLITRSILRQLGGEPGLAQSVAAEIANGNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCE
MVDLHLKPGDSTSLMASLEAMRARLTSIVHGIKTSAESISVAANQVAQGNVDLSQRTEEQ
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AASLEETAASMEELTSTVKHNTDNARQGSTLAVTASQTASSGGDVVRQVVGTMDDIASSS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
RKVAEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAVAAKEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
HHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHH
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARAQTEPAAAVKRQVSVAPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCHH
QVKRRLEPARLPARVAAPAAAAAGAGNGEWATF
HHHHCCCHHCCCHHHHCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]