| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is puuP [H]
Identifier: 238024881
GI number: 238024881
Start: 1928587
End: 1929942
Strand: Reverse
Name: puuP [H]
Synonym: bglu_2g15220
Alternate gene names: 238024881
Gene position: 1929942-1928587 (Counterclockwise)
Preceding gene: 238024882
Following gene: 238024880
Centisome position: 68.26
GC content: 68.51
Gene sequence:
>1356_bases ATGACTCAATCCTCCCCGGCGCGGCTCGCGGCCGGCCACGAGCCGCACCTGAAGCGCGCGCTCGGTCTGCCGTCCGTGCT GCTGTTCGGCCTTGCCTACATGGCCCCGCTGATCGTCTACGGCACCTACGGCGTGCTGGCCGGCGCGAGCCAGGACACGG CCGCGCTCGCCTACCTGCTGGCGCTGATCGCGATCGTGTTTACCGCGCTCAGCTACGGCAAGCTCGCGCGGCTGTTCCCG GTGGCGGGCTCGGCCTACACCTATACGCGCAAGAGCTTCAACGCGCATCTGGGCTTCCTGGTCGGCTGGGCCACGCTGCT CGACTACTTCTTCCTGCCGATGGTGATCTGGCTGATCGGCGCGGCCTATCTGGGCGCGGCGTTCCCGTCGGTTCCGGCAT GGATCTGGATCGTGGCGTTCATCGTGCTGACCAGCGCGCTGAACATCCTCGGCATCGAGCTGGCGACCCGCTTCAACATC GTGCTGATGCTGGTGCAGCTCGTGATCGTGGCGCTGTTCGTGGTGCTGTGCTGCCACTACGCGCTGGCCGCGGCGGGGCC GGGCGGGCTGGCCGCGGCGCAGCCGTTCTTCAACGCCAAGGTGCCGCTGTCGGCCACCATGGCCGGCGCCGCCATCGCCG CGTATTCGTACCTCGGCTTCGACGCCGTCTCGACCTTGACCGAGGAAACCGTCGAACCCGAGAAGACCATCCCGCGCGCG ATCGTGCTGATCGCGCTGATCGGCGGCGCGATCTTCGTGATCGCGGCCTATACGCTGCAGCTCGCGCATCCGGGCGCGGT ATTCAAGGACCCCGATTCGGCCGCGTTCGAGATCGCCAAGAAAGTGGGCGGCGACGTGTTCGTGTCGGTGTTCCTCGCCG GGCTGATCCTCGCGCAGTTCGCCTCCGGCATCTCGGCGCAGGCCAGCGTCGGCCGGCTGCTCTATGCGATGGGCCGCGAC GAGGTGCTGCCGCGCCGGATCTTCGGCTACGTGCACCCGCGCTTTCGCACGCCGGCGCTCAACATCGGGTTCGCCGGCAT CGTCGGGCTGATCGCGCTCAAGCTCGACGTGGCCACCTCCACCTCGTTCATCAACTTCGGCGCGTTCCTCGCGTTCACGG CCGTCAACCTCTGCGTGATGCGCCAGTACCTGGTCACGCCGCCGGCGCAGCGCCGCTTCGGGCCGGTCGGCGGGCTGCTG TTTCCGGCGCTCGGCGCGATCGCCGATGTCTGGCTGCTGCTGAGCCTCGAAAAATCGGCGCTCGTGCTCGGCGCGATCTG GTTCGTGCTCGGCCTGGCCTACCTCGGCTGGCTGACGCGCGGTTTTCGCCAGGCGCCGCCTGACATCGCGGTGTGA
Upstream 100 bases:
>100_bases CCCCGGCGTGCCGACCGGCCACGCCGTCACGCGGTGCGGCGCCGTGCAACCTGGTGTTTTGCGTTCGGACGCGCCTGGCG CGTTCACTGGAGACCCGACC
Downstream 100 bases:
>100_bases GGCATGCCGGCCCGGCGTGGCGGCGGTTCGCCGGGCCGCGGCCGGCATGCAGTTGCGACACCGCACGACGCATCCCGACG GCCGTCGGCGCGCGGCCCGT
Product: putrescine importer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTQSSPARLAAGHEPHLKRALGLPSVLLFGLAYMAPLIVYGTYGVLAGASQDTAALAYLLALIAIVFTALSYGKLARLFP VAGSAYTYTRKSFNAHLGFLVGWATLLDYFFLPMVIWLIGAAYLGAAFPSVPAWIWIVAFIVLTSALNILGIELATRFNI VLMLVQLVIVALFVVLCCHYALAAAGPGGLAAAQPFFNAKVPLSATMAGAAIAAYSYLGFDAVSTLTEETVEPEKTIPRA IVLIALIGGAIFVIAAYTLQLAHPGAVFKDPDSAAFEIAKKVGGDVFVSVFLAGLILAQFASGISAQASVGRLLYAMGRD EVLPRRIFGYVHPRFRTPALNIGFAGIVGLIALKLDVATSTSFINFGAFLAFTAVNLCVMRQYLVTPPAQRRFGPVGGLL FPALGAIADVWLLLSLEKSALVLGAIWFVLGLAYLGWLTRGFRQAPPDIAV
Sequences:
>Translated_451_residues MTQSSPARLAAGHEPHLKRALGLPSVLLFGLAYMAPLIVYGTYGVLAGASQDTAALAYLLALIAIVFTALSYGKLARLFP VAGSAYTYTRKSFNAHLGFLVGWATLLDYFFLPMVIWLIGAAYLGAAFPSVPAWIWIVAFIVLTSALNILGIELATRFNI VLMLVQLVIVALFVVLCCHYALAAAGPGGLAAAQPFFNAKVPLSATMAGAAIAAYSYLGFDAVSTLTEETVEPEKTIPRA IVLIALIGGAIFVIAAYTLQLAHPGAVFKDPDSAAFEIAKKVGGDVFVSVFLAGLILAQFASGISAQASVGRLLYAMGRD EVLPRRIFGYVHPRFRTPALNIGFAGIVGLIALKLDVATSTSFINFGAFLAFTAVNLCVMRQYLVTPPAQRRFGPVGGLL FPALGAIADVWLLLSLEKSALVLGAIWFVLGLAYLGWLTRGFRQAPPDIAV >Mature_450_residues TQSSPARLAAGHEPHLKRALGLPSVLLFGLAYMAPLIVYGTYGVLAGASQDTAALAYLLALIAIVFTALSYGKLARLFPV AGSAYTYTRKSFNAHLGFLVGWATLLDYFFLPMVIWLIGAAYLGAAFPSVPAWIWIVAFIVLTSALNILGIELATRFNIV LMLVQLVIVALFVVLCCHYALAAAGPGGLAAAQPFFNAKVPLSATMAGAAIAAYSYLGFDAVSTLTEETVEPEKTIPRAI VLIALIGGAIFVIAAYTLQLAHPGAVFKDPDSAAFEIAKKVGGDVFVSVFLAGLILAQFASGISAQASVGRLLYAMGRDE VLPRRIFGYVHPRFRTPALNIGFAGIVGLIALKLDVATSTSFINFGAFLAFTAVNLCVMRQYLVTPPAQRRFGPVGGLLF PALGAIADVWLLLSLEKSALVLGAIWFVLGLAYLGWLTRGFRQAPPDIAV
Specific function: Imports putrescine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI110347453, Length=394, Percent_Identity=26.9035532994924, Blast_Score=82, Evalue=9e-16, Organism=Escherichia coli, GI87081869, Length=449, Percent_Identity=45.43429844098, Blast_Score=385, Evalue=1e-108, Organism=Escherichia coli, GI87082023, Length=435, Percent_Identity=42.5287356321839, Blast_Score=341, Evalue=5e-95, Organism=Escherichia coli, GI87081708, Length=293, Percent_Identity=25.938566552901, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI87082250, Length=391, Percent_Identity=24.0409207161125, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1790653, Length=377, Percent_Identity=25.9946949602122, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788480, Length=291, Percent_Identity=25.085910652921, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786789, Length=329, Percent_Identity=22.4924012158055, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17532491, Length=398, Percent_Identity=27.6381909547739, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17533459, Length=394, Percent_Identity=24.8730964467005, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17531343, Length=400, Percent_Identity=25, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI221512776, Length=431, Percent_Identity=25.754060324826, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24666159, Length=431, Percent_Identity=25.754060324826, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24667468, Length=409, Percent_Identity=26.4058679706601, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24668806, Length=419, Percent_Identity=25.0596658711217, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI21356285, Length=419, Percent_Identity=25.0596658711217, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24668802, Length=419, Percent_Identity=25.0596658711217, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI281366235, Length=409, Percent_Identity=25.4278728606357, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI116007820, Length=409, Percent_Identity=25.4278728606357, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 47777; Mature: 47646
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSSPARLAAGHEPHLKRALGLPSVLLFGLAYMAPLIVYGTYGVLAGASQDTAALAYLL CCCCCCCHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ALIAIVFTALSYGKLARLFPVAGSAYTYTRKSFNAHLGFLVGWATLLDYFFLPMVIWLIG HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAYLGAAFPSVPAWIWIVAFIVLTSALNILGIELATRFNIVLMLVQLVIVALFVVLCCHY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAAGPGGLAAAQPFFNAKVPLSATMAGAAIAAYSYLGFDAVSTLTEETVEPEKTIPRA HHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IVLIALIGGAIFVIAAYTLQLAHPGAVFKDPDSAAFEIAKKVGGDVFVSVFLAGLILAQF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH ASGISAQASVGRLLYAMGRDEVLPRRIFGYVHPRFRTPALNIGFAGIVGLIALKLDVATS HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC TSFINFGAFLAFTAVNLCVMRQYLVTPPAQRRFGPVGGLLFPALGAIADVWLLLSLEKSA CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVLGAIWFVLGLAYLGWLTRGFRQAPPDIAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TQSSPARLAAGHEPHLKRALGLPSVLLFGLAYMAPLIVYGTYGVLAGASQDTAALAYLL CCCCCCHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ALIAIVFTALSYGKLARLFPVAGSAYTYTRKSFNAHLGFLVGWATLLDYFFLPMVIWLIG HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAYLGAAFPSVPAWIWIVAFIVLTSALNILGIELATRFNIVLMLVQLVIVALFVVLCCHY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAAGPGGLAAAQPFFNAKVPLSATMAGAAIAAYSYLGFDAVSTLTEETVEPEKTIPRA HHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IVLIALIGGAIFVIAAYTLQLAHPGAVFKDPDSAAFEIAKKVGGDVFVSVFLAGLILAQF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH ASGISAQASVGRLLYAMGRDEVLPRRIFGYVHPRFRTPALNIGFAGIVGLIALKLDVATS HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC TSFINFGAFLAFTAVNLCVMRQYLVTPPAQRRFGPVGGLLFPALGAIADVWLLLSLEKSA CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVLGAIWFVLGLAYLGWLTRGFRQAPPDIAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]