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The map label for this gene is dapA [H]

Identifier: 238024879

GI number: 238024879

Start: 1925829

End: 1926716

Strand: Reverse

Name: dapA [H]

Synonym: bglu_2g15200

Alternate gene names: 238024879

Gene position: 1926716-1925829 (Counterclockwise)

Preceding gene: 238024880

Following gene: 238024878

Centisome position: 68.15

GC content: 68.81

Gene sequence:

>888_bases
ATGACAGTGAATTTCCGGGGCATCGTCCCCGCCCTCATCACCCCGATGAATGCCGACGAGGAGGTCGACGAAGCGGGCCT
GCGCACCCTCGTCGAGCGCCTGATCGAAAAGGGCGTGCATGCGCTGTTCGTGCTCGGCACCAACGGCGAATTCATCGCGC
TCTCGGAAGCCGAGAAGCTGCGCATCGCACGCATTGCCGTCGATCAGGCGCGCTCGCGCGTGCCCGTGATCGCCGGGACC
GGCGCCTACGCCACGCGCGAGGTGATCGCCCTCAACACGAAGATGCAGGACGCGGGCGTGGATGCGGTCTCGGTCATCAC
GCCGTACTTCAACGGTGCGACGCAAGCCGAACTCTTCAGGCATTACGAGCGCATCGCGCGCGCGACGCCGCTGCCCGTGA
TGCTCTACACGATTCCCGCCAAGGCCGGCATCACCTTGACCGTCGACACGGTGCGCCGCCTCGCCGAGATTCCGAACATT
CGCGGCATCAAGGACAGCGGCGGCGACTTCGACCGCCTGCTGCAGCTCATCGGCCTGCGCCGCGATGATTTCGCCGTGTT
CACCGGCACCGATTCGATGATCCTGTGGACCCTCATCGCGGGCGGCGACGGCGCCGTGGCCGCCACCACGAACGCCGTGC
CCGACGTCGTCATGTCGATCTGGAATCACTTCCAGGCCGGCGAGATCGAAGCCGCGCGGCGCGCCCAGGAGTCGCTGCGG
GCCCTGCGCGACGCATTCGCGCTCGGCACCATGCCGGTCGTGCTCAAGACCGCCGCGGCGCTGCTCGGCATGCCGGCCGG
TCCGGCACGCGCGCCGGCACAGGCGCTCGACGCCGCCACGCGCGAGAAGCTCGCCCAGGCGCTGGCGAGCTATCCGCGCG
TCGCCTGA

Upstream 100 bases:

>100_bases
CGGCGGCGTTCGAGGCGGGCGCCGCCAACTGCGTCGCAGGCACGACGCTGCACCGCGCGTGCAGCAGAGCGCGGTGCGAC
GGCGACGAGGAGAGACGAGC

Downstream 100 bases:

>100_bases
GGCCGCCGTCGAAATCCGAGCGAAGCGCAATCCAAGCCCGGGCAGACGCCGCGGCGTCGCCCAAACCGAGACTCACGACA
TGAAGCCCGTTTATCACTTT

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTVNFRGIVPALITPMNADEEVDEAGLRTLVERLIEKGVHALFVLGTNGEFIALSEAEKLRIARIAVDQARSRVPVIAGT
GAYATREVIALNTKMQDAGVDAVSVITPYFNGATQAELFRHYERIARATPLPVMLYTIPAKAGITLTVDTVRRLAEIPNI
RGIKDSGGDFDRLLQLIGLRRDDFAVFTGTDSMILWTLIAGGDGAVAATTNAVPDVVMSIWNHFQAGEIEAARRAQESLR
ALRDAFALGTMPVVLKTAAALLGMPAGPARAPAQALDAATREKLAQALASYPRVA

Sequences:

>Translated_295_residues
MTVNFRGIVPALITPMNADEEVDEAGLRTLVERLIEKGVHALFVLGTNGEFIALSEAEKLRIARIAVDQARSRVPVIAGT
GAYATREVIALNTKMQDAGVDAVSVITPYFNGATQAELFRHYERIARATPLPVMLYTIPAKAGITLTVDTVRRLAEIPNI
RGIKDSGGDFDRLLQLIGLRRDDFAVFTGTDSMILWTLIAGGDGAVAATTNAVPDVVMSIWNHFQAGEIEAARRAQESLR
ALRDAFALGTMPVVLKTAAALLGMPAGPARAPAQALDAATREKLAQALASYPRVA
>Mature_294_residues
TVNFRGIVPALITPMNADEEVDEAGLRTLVERLIEKGVHALFVLGTNGEFIALSEAEKLRIARIAVDQARSRVPVIAGTG
AYATREVIALNTKMQDAGVDAVSVITPYFNGATQAELFRHYERIARATPLPVMLYTIPAKAGITLTVDTVRRLAEIPNIR
GIKDSGGDFDRLLQLIGLRRDDFAVFTGTDSMILWTLIAGGDGAVAATTNAVPDVVMSIWNHFQAGEIEAARRAQESLRA
LRDAFALGTMPVVLKTAAALLGMPAGPARAPAQALDAATREKLAQALASYPRVA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=286, Percent_Identity=33.5664335664336, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI13540533, Length=286, Percent_Identity=30.4195804195804, Blast_Score=106, Evalue=3e-23,
Organism=Escherichia coli, GI1786463, Length=279, Percent_Identity=37.6344086021505, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788823, Length=285, Percent_Identity=33.3333333333333, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI87082415, Length=267, Percent_Identity=35.2059925093633, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1789620, Length=247, Percent_Identity=31.5789473684211, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 31573; Mature: 31442

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNFRGIVPALITPMNADEEVDEAGLRTLVERLIEKGVHALFVLGTNGEFIALSEAEKL
CEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCHHHH
RIARIAVDQARSRVPVIAGTGAYATREVIALNTKMQDAGVDAVSVITPYFNGATQAELFR
HHHHHHHHHHHCCCCEEECCCCHHHHHEEEECCCHHHCCCCHHHHHHHCCCCCHHHHHHH
HYERIARATPLPVMLYTIPAKAGITLTVDTVRRLAEIPNIRGIKDSGGDFDRLLQLIGLR
HHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
RDDFAVFTGTDSMILWTLIAGGDGAVAATTNAVPDVVMSIWNHFQAGEIEAARRAQESLR
CCCEEEEECCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ALRDAFALGTMPVVLKTAAALLGMPAGPARAPAQALDAATREKLAQALASYPRVA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVNFRGIVPALITPMNADEEVDEAGLRTLVERLIEKGVHALFVLGTNGEFIALSEAEKL
EECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCHHHH
RIARIAVDQARSRVPVIAGTGAYATREVIALNTKMQDAGVDAVSVITPYFNGATQAELFR
HHHHHHHHHHHCCCCEEECCCCHHHHHEEEECCCHHHCCCCHHHHHHHCCCCCHHHHHHH
HYERIARATPLPVMLYTIPAKAGITLTVDTVRRLAEIPNIRGIKDSGGDFDRLLQLIGLR
HHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
RDDFAVFTGTDSMILWTLIAGGDGAVAATTNAVPDVVMSIWNHFQAGEIEAARRAQESLR
CCCEEEEECCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ALRDAFALGTMPVVLKTAAALLGMPAGPARAPAQALDAATREKLAQALASYPRVA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]