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The map label for this gene is cspG [H]

Identifier: 238024869

GI number: 238024869

Start: 1914335

End: 1914538

Strand: Reverse

Name: cspG [H]

Synonym: bglu_2g15090

Alternate gene names: 238024869

Gene position: 1914538-1914335 (Counterclockwise)

Preceding gene: 238024873

Following gene: 238024868

Centisome position: 67.72

GC content: 57.35

Gene sequence:

>204_bases
ATGGATACCGGTATCGTCAAGTGGTTCAACGACAGCAAAGGTTTTGGCTTCATCTCGCCGGACAACGGCAAGGATGATCT
GTTTGCCCATTTTTCCGAAATTCGCGGCGACGGCTTCCGCTCGCTGGCCGAAGGCCAGCGCGTGAGCTTTGAAACCAAGG
TCGGCCAGAAGGGCCTGCAAGCGGCCAACATCACGCCGCTCTGA

Upstream 100 bases:

>100_bases
CGCGGACCGCGGTATTCGTTGTCCTCTCCCTCCTTGATCTTTCGCACCTTGCCAATTGCGGGCGCGAAGCTTCGTTCGTC
CCTACCCTCAAAGGAGCATC

Downstream 100 bases:

>100_bases
GCCGCGTCTGGCCGCTCGAAATCGCATGGCGCGGCAGGCCGCGCGATGCGTTGGCGATGCCGCCGCCCGGCATCGCTTGC
GGAACGGGGGCGCCGAAGTC

Product: Cold shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MDTGIVKWFNDSKGFGFISPDNGKDDLFAHFSEIRGDGFRSLAEGQRVSFETKVGQKGLQAANITPL

Sequences:

>Translated_67_residues
MDTGIVKWFNDSKGFGFISPDNGKDDLFAHFSEIRGDGFRSLAEGQRVSFETKVGQKGLQAANITPL
>Mature_67_residues
MDTGIVKWFNDSKGFGFISPDNGKDDLFAHFSEIRGDGFRSLAEGQRVSFETKVGQKGLQAANITPL

Specific function: Binds To And Stimulates The Transcription Of The CCAAT- Containing, Cold-Shock-Inducible Promoters Of The H-Ns And Gyra Proteins. Binds Also To The Inverted Repeat 5'-ATTGG-3'. [C]

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI1789979, Length=65, Percent_Identity=61.5384615384615, Blast_Score=87, Evalue=2e-19,
Organism=Escherichia coli, GI1788126, Length=64, Percent_Identity=60.9375, Blast_Score=86, Evalue=4e-19,
Organism=Escherichia coli, GI1786841, Length=64, Percent_Identity=60.9375, Blast_Score=85, Evalue=8e-19,
Organism=Escherichia coli, GI1787107, Length=67, Percent_Identity=52.2388059701493, Blast_Score=81, Evalue=1e-17,
Organism=Escherichia coli, GI2367114, Length=65, Percent_Identity=53.8461538461538, Blast_Score=80, Evalue=2e-17,
Organism=Escherichia coli, GI1787839, Length=62, Percent_Identity=58.0645161290323, Blast_Score=80, Evalue=3e-17,
Organism=Escherichia coli, GI1787834, Length=65, Percent_Identity=49.2307692307692, Blast_Score=71, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24658520, Length=62, Percent_Identity=43.5483870967742, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7350; Mature: 7350

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00352 COLD_SHOCK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTGIVKWFNDSKGFGFISPDNGKDDLFAHFSEIRGDGFRSLAEGQRVSFETKVGQKGLQ
CCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCCC
AANITPL
CCCCCCC
>Mature Secondary Structure
MDTGIVKWFNDSKGFGFISPDNGKDDLFAHFSEIRGDGFRSLAEGQRVSFETKVGQKGLQ
CCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCCC
AANITPL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10483731 [H]