| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is acnB [H]
Identifier: 238024834
GI number: 238024834
Start: 1872042
End: 1874627
Strand: Reverse
Name: acnB [H]
Synonym: bglu_2g14740
Alternate gene names: 238024834
Gene position: 1874627-1872042 (Counterclockwise)
Preceding gene: 238024835
Following gene: 238024833
Centisome position: 66.3
GC content: 67.01
Gene sequence:
>2586_bases ATGCTTGAAAACTTTCGTGCTCACGTGGCCGCCCGCGCCGCGCTTGGTATCCCGCCCCTGCCGTTGACGGCCCAACAGAC CGCCGAGTTGGTGGAGCTGCTGGTGAATCCGCCCGCCGGCGAAGAGCAGACGCTGCTCGACCTGATCACCCACCGCGTGC CCGCCGGCGTCGACGAAGCCGCGCGCGTGAAGGCCGGCTTCCTGGCCGCCGTGGCCAAGGGCGAGACCGCCTGCGCGCTG ATCTCGCGCGAGCGCGCGACCGAGCTGCTCGGCACCATGCTGGGCGGCTACAACATCCAGCCGCTGATCGAACTGCTGTC CGACGAGGCGGTGGCCGCCGTGGCCGCCGACGCGCTCAAGAAGACGCTGCTGATGTTCGACCAGTTCCACGACGTCAAGG AACTGGCCGAGCAGGGCAACGCGCACGCCAAGGCCGTGCTGCAGAGCTGGGCCGACGCCGAGTGGTTCACGAGCCGCCCG GAAGTGCCGCAGAGCCTGACCGTCACCGTCTTCAAGGTGCCGGGCGAAACCAATACCGACGATCTCTCGCCGGCCCCGGA CGCCACCACGCGCCCCGACATCCCGCTGCACGCGCTGGCGATGCTGAAGAACGCGCGCCCCGGCATCACCCCGGAAGAGG ACGGCAAGCGCGGCCCGGTGAAGTTCATCGAGTCGCTGAAGGAGAAGGGCCATCTGGTCGCCTACGTGGGCGACGTGGTC GGCACCGGCTCCTCGCGCAAGTCGGCCACCAATTCGGTGCTTTGGTTCACGGGCGAGGACATCCCGTTCGTGCCGAACAA GCGCTTCGGCGGCGTGTGCCTGGGCGGCAAGATCGCGCCGATCTTCTACAACACGATGGAAGATGCCGGCGCGCTGCCGA TCGAACTCGACGTCTCGCAGATGGAAATGGGCGACGTGATCGAACTGCGTCCCTATGAAGGCAAGGCACTCAAGAACGGC GAGGTGATCGCCGAGTTCCAGGTGAAGTCCGACGTGCTGTTCGACGAAGTGCGCGCCGGCGGCCGGATCCCGCTCATCAT CGGCCGCGGCTTGACCGCCAAGGCGCGCGAGGCGCTGGGGCTGGCCCCGTCGACGCTGTTCCGTCTGCCGCATCAGCCGG CCGACAGCGGCCGCGGCTTCTCGCTCGCGCAGAAGATGGTCGGCCGCGCCTGCGGCCTGCCGGAAGGCCAGGGCGTGCGC CCGGGCACCTACTGCGAGCCGAAGATGACCTCGGTGGGTTCGCAGGACACCACCGGCCCGATGACGCGCGACGAGCTGAA GGATCTGGCCTGCCTCGGCTTTTCTGCCGACCTCGTGATGCAGTCGTTCTGCCACACGGCGGCCTATCCGAAGCCGGTGG ACGTGAAAACGCACCAGACGCTGCCGAACTTCATCAGCACGCGCGGCGGCATCGCGCTGCGCCCCGGCGACGGCGTGATC CACTCCTGGCTGAACCGCATGCTGCTGCCCGACACGGTCGGCACCGGCGGCGATTCGCACACGCGTTTCCCGATCGGCAT CAGCTTCCCGGCCGGCTCGGGCCTGGTCGCGTTCGCCGCCGCCACCGGCACGATGCCGCTCGACATGCCGGAATCGGTGC TGGTCCGCTTCAAGGGCAAGATGCAGCCGGGCGTCACGCTGCGCGACCTCGTCAACGCGATTCCGCTCTATGCGATCAAG CAGGGCATGCTGACGGTGGCCAAGCAGGGCAAGAAAAACATCTTCTCGGGCCGCATCCTCGAGATCGAGGGCCTGCCGGA CCTGAAGGTCGAGCAGGCGTTCGAGCTGTCGGACGCGTCGGCCGAGCGTTCGGCCGCCGGCTGCACGGTGCGGCTGAACA AGGAGCCGATCATCGAGTACCTCAACAGCAACGTCACGCTGCTGAAGTGGATGATCGCCGAGGGCTACCAGGACCCGCGC AGCCTGCAGCGCCGCATCGCGGCGATGGAGCAGTGGCTGGCCGACCCGCAGTTGCTGGAGCCGGATGCCGACGCCGACTA CGCCGCCGTGATCGAGATCGATCTGGCCGACATCCACGAGCCGATCGTGGCCTGCCCGAACGATCCGGACGACGTGAAGA CGCTGTCGGACGTGGCCGGCGCCAAGATCGACGAAGTGTTCATCGGCTCGTGCATGACCAACATCGGCCACTTCCGCGCC GCCTCGAAGCTGCTGGAAGGCAAGCGCGACATTCCCGTCAAGCTGTGGGTCGCGCCGCCGACCAAGATGGACCAGAAGCA GCTGACCGAGGAAGGCCATTACGGCGTGTTCGGCACGGCCGGCGCGCGCACCGAAATGCCGGGCTGCTCGCTGTGCATGG GCAACCAGGCACAGGTGCGCGAAGGCGCGACGGTGATGTCGACCTCCACGCGCAACTTCCCGAACCGTCTCGGCAAGAAC ACCAACGTGTATCTCGGCTCGGCGGAACTGGCGGCGATCTGCTCGCGTCTGGGCAAGATCCCGACCAGGGAAGAGTACAT GGCCGACATGGGCGTGCTGACCGCCAATGGCGACAAGATCTACCAGTACATGAACTTCGACCAGATCGCGGATTTCAAGG AAGTGGCGGATACGGTCAAGGCGTAA
Upstream 100 bases:
>100_bases TTTGATCCAATCCGATTAGAATCGTGGCCGAAGCAGCGCCCGTACGCATTCCGGAGCGTCTGACGCGCCATCCCCTGAAC GCCATACCAGCAGGTTCCCC
Downstream 100 bases:
>100_bases GCAGCCTGAGGATCGGGCCACGCGCGAGGGATGCGGCGTGGCCTCCGAGAAGCGCCGCGGGGGAATACCCGCGGCGCTTT TTTTGTCGGTGCGGGCGCGG
Product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Products: NA
Alternate protein names: Aconitase 2; 2-methylisocitrate dehydratase; Citrate hydro-lyase 2 [H]
Number of amino acids: Translated: 861; Mature: 861
Protein sequence:
>861_residues MLENFRAHVAARAALGIPPLPLTAQQTAELVELLVNPPAGEEQTLLDLITHRVPAGVDEAARVKAGFLAAVAKGETACAL ISRERATELLGTMLGGYNIQPLIELLSDEAVAAVAADALKKTLLMFDQFHDVKELAEQGNAHAKAVLQSWADAEWFTSRP EVPQSLTVTVFKVPGETNTDDLSPAPDATTRPDIPLHALAMLKNARPGITPEEDGKRGPVKFIESLKEKGHLVAYVGDVV GTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGGKIAPIFYNTMEDAGALPIELDVSQMEMGDVIELRPYEGKALKNG EVIAEFQVKSDVLFDEVRAGGRIPLIIGRGLTAKAREALGLAPSTLFRLPHQPADSGRGFSLAQKMVGRACGLPEGQGVR PGTYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVKTHQTLPNFISTRGGIALRPGDGVI HSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGTMPLDMPESVLVRFKGKMQPGVTLRDLVNAIPLYAIK QGMLTVAKQGKKNIFSGRILEIEGLPDLKVEQAFELSDASAERSAAGCTVRLNKEPIIEYLNSNVTLLKWMIAEGYQDPR SLQRRIAAMEQWLADPQLLEPDADADYAAVIEIDLADIHEPIVACPNDPDDVKTLSDVAGAKIDEVFIGSCMTNIGHFRA ASKLLEGKRDIPVKLWVAPPTKMDQKQLTEEGHYGVFGTAGARTEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLGKN TNVYLGSAELAAICSRLGKIPTREEYMADMGVLTANGDKIYQYMNFDQIADFKEVADTVKA
Sequences:
>Translated_861_residues MLENFRAHVAARAALGIPPLPLTAQQTAELVELLVNPPAGEEQTLLDLITHRVPAGVDEAARVKAGFLAAVAKGETACAL ISRERATELLGTMLGGYNIQPLIELLSDEAVAAVAADALKKTLLMFDQFHDVKELAEQGNAHAKAVLQSWADAEWFTSRP EVPQSLTVTVFKVPGETNTDDLSPAPDATTRPDIPLHALAMLKNARPGITPEEDGKRGPVKFIESLKEKGHLVAYVGDVV GTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGGKIAPIFYNTMEDAGALPIELDVSQMEMGDVIELRPYEGKALKNG EVIAEFQVKSDVLFDEVRAGGRIPLIIGRGLTAKAREALGLAPSTLFRLPHQPADSGRGFSLAQKMVGRACGLPEGQGVR PGTYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVKTHQTLPNFISTRGGIALRPGDGVI HSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGTMPLDMPESVLVRFKGKMQPGVTLRDLVNAIPLYAIK QGMLTVAKQGKKNIFSGRILEIEGLPDLKVEQAFELSDASAERSAAGCTVRLNKEPIIEYLNSNVTLLKWMIAEGYQDPR SLQRRIAAMEQWLADPQLLEPDADADYAAVIEIDLADIHEPIVACPNDPDDVKTLSDVAGAKIDEVFIGSCMTNIGHFRA ASKLLEGKRDIPVKLWVAPPTKMDQKQLTEEGHYGVFGTAGARTEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLGKN TNVYLGSAELAAICSRLGKIPTREEYMADMGVLTANGDKIYQYMNFDQIADFKEVADTVKA >Mature_861_residues MLENFRAHVAARAALGIPPLPLTAQQTAELVELLVNPPAGEEQTLLDLITHRVPAGVDEAARVKAGFLAAVAKGETACAL ISRERATELLGTMLGGYNIQPLIELLSDEAVAAVAADALKKTLLMFDQFHDVKELAEQGNAHAKAVLQSWADAEWFTSRP EVPQSLTVTVFKVPGETNTDDLSPAPDATTRPDIPLHALAMLKNARPGITPEEDGKRGPVKFIESLKEKGHLVAYVGDVV GTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGGKIAPIFYNTMEDAGALPIELDVSQMEMGDVIELRPYEGKALKNG EVIAEFQVKSDVLFDEVRAGGRIPLIIGRGLTAKAREALGLAPSTLFRLPHQPADSGRGFSLAQKMVGRACGLPEGQGVR PGTYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVKTHQTLPNFISTRGGIALRPGDGVI HSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGTMPLDMPESVLVRFKGKMQPGVTLRDLVNAIPLYAIK QGMLTVAKQGKKNIFSGRILEIEGLPDLKVEQAFELSDASAERSAAGCTVRLNKEPIIEYLNSNVTLLKWMIAEGYQDPR SLQRRIAAMEQWLADPQLLEPDADADYAAVIEIDLADIHEPIVACPNDPDDVKTLSDVAGAKIDEVFIGSCMTNIGHFRA ASKLLEGKRDIPVKLWVAPPTKMDQKQLTEEGHYGVFGTAGARTEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLGKN TNVYLGSAELAAICSRLGKIPTREEYMADMGVLTANGDKIYQYMNFDQIADFKEVADTVKA
Specific function: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate as well as the dehydration of 2-methylisocitrate to cis-2-methylaconitate [H]
COG id: COG1049
COG function: function code C; Aconitase B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aconitase/IPM isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367097, Length=862, Percent_Identity=74.3619489559165, Blast_Score=1280, Evalue=0.0, Organism=Escherichia coli, GI1786259, Length=375, Percent_Identity=25.0666666666667, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321429, Length=360, Percent_Identity=24.4444444444444, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015931 - InterPro: IPR015937 - InterPro: IPR001030 - InterPro: IPR015928 - InterPro: IPR015932 - InterPro: IPR018136 - InterPro: IPR004406 - InterPro: IPR015930 - InterPro: IPR015933 - InterPro: IPR015929 [H]
Pfam domain/function: PF00330 Aconitase; PF06434 Aconitase_2_N; PF11791 Aconitase_B_N [H]
EC number: =4.2.1.3; =4.2.1.99 [H]
Molecular weight: Translated: 92696; Mature: 92696
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00450 ACONITASE_1 ; PS01244 ACONITASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLENFRAHVAARAALGIPPLPLTAQQTAELVELLVNPPAGEEQTLLDLITHRVPAGVDEA CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHH ARVKAGFLAAVAKGETACALISRERATELLGTMLGGYNIQPLIELLSDEAVAAVAADALK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHH KTLLMFDQFHDVKELAEQGNAHAKAVLQSWADAEWFTSRPEVPQSLTVTVFKVPGETNTD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCCCCCC DLSPAPDATTRPDIPLHALAMLKNARPGITPEEDGKRGPVKFIESLKEKGHLVAYVGDVV CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECHHH GTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGGKIAPIFYNTMEDAGALPIELDVSQ CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCEEEEHEEECHHHCCCCEEEEEHHH MEMGDVIELRPYEGKALKNGEVIAEFQVKSDVLFDEVRAGGRIPLIIGRGLTAKAREALG HCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHC LAPSTLFRLPHQPADSGRGFSLAQKMVGRACGLPEGQGVRPGTYCEPKMTSVGSQDTTGP CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC MTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVKTHQTLPNFISTRGGIALRPGDGVI CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHH HSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGTMPLDMPESVLVRFKGK HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHCCCC MQPGVTLRDLVNAIPLYAIKQGMLTVAKQGKKNIFSGRILEIEGLPDLKVEQAFELSDAS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCC AERSAAGCTVRLNKEPIIEYLNSNVTLLKWMIAEGYQDPRSLQRRIAAMEQWLADPQLLE CHHCCCCCEEEECCHHHHHHHCCCHHEEHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC PDADADYAAVIEIDLADIHEPIVACPNDPDDVKTLSDVAGAKIDEVFIGSCMTNIGHFRA CCCCCCEEEEEEEEHHHCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ASKLLEGKRDIPVKLWVAPPTKMDQKQLTEEGHYGVFGTAGARTEMPGCSLCMGNQAQVR HHHHHCCCCCCCEEEEECCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCEECCCHHHHH EGATVMSTSTRNFPNRLGKNTNVYLGSAELAAICSRLGKIPTREEYMADMGVLTANGDKI CCCEEEECCCCCHHHHHCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHCCEEECCCHHE YQYMNFDQIADFKEVADTVKA EECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MLENFRAHVAARAALGIPPLPLTAQQTAELVELLVNPPAGEEQTLLDLITHRVPAGVDEA CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHH ARVKAGFLAAVAKGETACALISRERATELLGTMLGGYNIQPLIELLSDEAVAAVAADALK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHH KTLLMFDQFHDVKELAEQGNAHAKAVLQSWADAEWFTSRPEVPQSLTVTVFKVPGETNTD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCCCCCC DLSPAPDATTRPDIPLHALAMLKNARPGITPEEDGKRGPVKFIESLKEKGHLVAYVGDVV CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECHHH GTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGGKIAPIFYNTMEDAGALPIELDVSQ CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCEEEEHEEECHHHCCCCEEEEEHHH MEMGDVIELRPYEGKALKNGEVIAEFQVKSDVLFDEVRAGGRIPLIIGRGLTAKAREALG HCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHC LAPSTLFRLPHQPADSGRGFSLAQKMVGRACGLPEGQGVRPGTYCEPKMTSVGSQDTTGP CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC MTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVKTHQTLPNFISTRGGIALRPGDGVI CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHH HSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGTMPLDMPESVLVRFKGK HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHCCCC MQPGVTLRDLVNAIPLYAIKQGMLTVAKQGKKNIFSGRILEIEGLPDLKVEQAFELSDAS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCC AERSAAGCTVRLNKEPIIEYLNSNVTLLKWMIAEGYQDPRSLQRRIAAMEQWLADPQLLE CHHCCCCCEEEECCHHHHHHHCCCHHEEHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC PDADADYAAVIEIDLADIHEPIVACPNDPDDVKTLSDVAGAKIDEVFIGSCMTNIGHFRA CCCCCCEEEEEEEEHHHCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ASKLLEGKRDIPVKLWVAPPTKMDQKQLTEEGHYGVFGTAGARTEMPGCSLCMGNQAQVR HHHHHCCCCCCCEEEEECCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCEECCCHHHHH EGATVMSTSTRNFPNRLGKNTNVYLGSAELAAICSRLGKIPTREEYMADMGVLTANGDKI CCCEEEECCCCCHHHHHCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHCCEEECCCHHE YQYMNFDQIADFKEVADTVKA EECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]