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The map label for this gene is ycdI [C]

Identifier: 238024806

GI number: 238024806

Start: 1843985

End: 1844569

Strand: Direct

Name: ycdI [C]

Synonym: bglu_2g14440

Alternate gene names: 238024806

Gene position: 1843985-1844569 (Clockwise)

Preceding gene: 238024803

Following gene: 238024807

Centisome position: 65.22

GC content: 68.03

Gene sequence:

>585_bases
ATGACGCTTTCCGATTCCGCCCTCGACCAACTGTTCCGCACCGCACGCACGCACAACGCCTGGCAGCCCAAGCCGGTGGA
CGACGCGCTGCTGCGCCAGCTCGTCGAGCTGACCCTCTGGGGGCCGACCTCGGCGAACGCGAGCCCCGCGCGCTTCGTGT
TCGTCAAATCGCCGGAGGCGAAGGCGCGGCTCAAGCCGGCACTCCCCGAAGGTAATCTCGAAAAGACCATGAGCGCGCCC
GTGACCGTGATCATCGGCATGGACCTGGCGTTCCACGACCACCTGCCGAAGCTGTTCCCGCATGCCGACGCGCGCAGCTG
GTTCGCCGGCAACGACGCGCTGATCGAGGCGACGGCGTTCCGCAACAGCTCGCTGCAGGGCGCCTATCTGATCCTTGCCG
CGCGCGCGCTCGGCCTCGACGCGGGCCCGATGTCGGGCTTCGACGAGGCCAAGGTGGAGGCCGAGTTCTTCGCCGGGACG
CGGATCAAGGCGAACTTCCTCGTCAACCTCGGCTACGGCGACGAGTCCGGCCTGTTCCCGCGCAGCCCGCGTTTTGCGTT
CGACGAAGCCGCGCGCATCGAGTAA

Upstream 100 bases:

>100_bases
CCGCAAGGCCGCCGCGCCGGCGCAGCGCACCCGATCCTGTTTTCCCGCAACCCGGGGCGCCAGCCCGCGCGCCCCGCGAC
ATCCGAGACCCGATATGCCA

Downstream 100 bases:

>100_bases
GCGGCGCGAAGGCGTGCGCGGCACGGTGCGAAGGCGCGCGAAGCGCGGCCGGATGGCACCGGCCAGGCAAGCGCCGCCGG
CCAGGCTGGCCGTCCCGGCT

Product: malonic semialdehyde reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTLSDSALDQLFRTARTHNAWQPKPVDDALLRQLVELTLWGPTSANASPARFVFVKSPEAKARLKPALPEGNLEKTMSAP
VTVIIGMDLAFHDHLPKLFPHADARSWFAGNDALIEATAFRNSSLQGAYLILAARALGLDAGPMSGFDEAKVEAEFFAGT
RIKANFLVNLGYGDESGLFPRSPRFAFDEAARIE

Sequences:

>Translated_194_residues
MTLSDSALDQLFRTARTHNAWQPKPVDDALLRQLVELTLWGPTSANASPARFVFVKSPEAKARLKPALPEGNLEKTMSAP
VTVIIGMDLAFHDHLPKLFPHADARSWFAGNDALIEATAFRNSSLQGAYLILAARALGLDAGPMSGFDEAKVEAEFFAGT
RIKANFLVNLGYGDESGLFPRSPRFAFDEAARIE
>Mature_193_residues
TLSDSALDQLFRTARTHNAWQPKPVDDALLRQLVELTLWGPTSANASPARFVFVKSPEAKARLKPALPEGNLEKTMSAPV
TVIIGMDLAFHDHLPKLFPHADARSWFAGNDALIEATAFRNSSLQGAYLILAARALGLDAGPMSGFDEAKVEAEFFAGTR
IKANFLVNLGYGDESGLFPRSPRFAFDEAARIE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=189, Percent_Identity=57.6719576719577, Blast_Score=235, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 21158; Mature: 21027

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSDSALDQLFRTARTHNAWQPKPVDDALLRQLVELTLWGPTSANASPARFVFVKSPEA
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCC
KARLKPALPEGNLEKTMSAPVTVIIGMDLAFHDHLPKLFPHADARSWFAGNDALIEATAF
CCCCCCCCCCCCHHHHHCCCEEEEEECCHHHHHCCHHHCCCCCCCCEECCCCEEEEEEEC
RNSSLQGAYLILAARALGLDAGPMSGFDEAKVEAEFFAGTRIKANFLVNLGYGDESGLFP
CCCCCCCHHEEEEHHHHCCCCCCCCCCCHHHEEEEECCCCEEEEEEEEEECCCCCCCCCC
RSPRFAFDEAARIE
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TLSDSALDQLFRTARTHNAWQPKPVDDALLRQLVELTLWGPTSANASPARFVFVKSPEA
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCC
KARLKPALPEGNLEKTMSAPVTVIIGMDLAFHDHLPKLFPHADARSWFAGNDALIEATAF
CCCCCCCCCCCCHHHHHCCCEEEEEECCHHHHHCCHHHCCCCCCCCEECCCCEEEEEEEC
RNSSLQGAYLILAARALGLDAGPMSGFDEAKVEAEFFAGTRIKANFLVNLGYGDESGLFP
CCCCCCCHHEEEEHHHHCCCCCCCCCCCHHHEEEEECCCCEEEEEEEEEECCCCCCCCCC
RSPRFAFDEAARIE
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA