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The map label for this gene is ephD [H]

Identifier: 238024797

GI number: 238024797

Start: 1835095

End: 1836039

Strand: Direct

Name: ephD [H]

Synonym: bglu_2g14350

Alternate gene names: 238024797

Gene position: 1835095-1836039 (Clockwise)

Preceding gene: 238024796

Following gene: 238024798

Centisome position: 64.91

GC content: 73.12

Gene sequence:

>945_bases
GTGACGTCAGCCGCGACGGCGGTCGCGCCGGCTGCGGCCGGGCTGGAGACGATCACGGTGAACTCGGACGGCGTGCGGCT
CGCCGTGTACCTGAGCGGGCCGCGCGAGGCGCCGCCCGTGATCCTCGTGCACGGCTACCCCGACTCCGCGCGGGTCTGGA
AGCGCGTGCGCGAGACGCTCGAGACGCGCTACCGCGTGATCGCCTACGATGTGCGCGGCGCCGGCGCGTCCGACGCGCCG
GCATCGACCTCGGCCTATCGCCTCGCGCAGCTCGAACGCGACCTCGATGCCGTGGCCCGGGCGACCTGCGGGCGGCGGCC
GTTCCATCTGGTCGGCCACGACTGGGGCTCGATCCAGAGTTGGGAGGCCGTGACCGACCCGGCGATGCGCGGGCGCATCC
TGTCGTACACGTCGATCTCCGGCCCCTGCCTCGACCACGTGTTCCGCGCGCCGATGAGCCTCGGCCAATCGCTGAAGTCG
TGGTACATCGCGTTCTTCCATCTGCCGCTGCTGCCGGCGCTGTTCTGGCGCCTTGGCGGCGCCGCGCTGTGGCCCTGGTG
GCTGCGCCGCACCGAGCGGATTCGCGCCGCAGCCGACCCGCAGCAAGTGCGCAACGGCGTCAACGGCATCCGGCTCTACC
GCGCCAATTTCATCGCGCGTGCGCGACAGCCACGCGAACGCTACGCGCAGGCACCGGTGCAAATCCTGGTGCCGCTGCGC
GATCGCTACGTCACGCCCGCGCTGAGCGAGAACCTCGAGCGCTGGCTCGGCGTGCACGAGCGCGAGCTGTTCGAAGCGTC
GCACTGGACCGTGCTGCGCGAGGCGGCGCTGATCGCCGGGCGCATCGACCGCTTCGCCTCGCGGCACGAGCCCTCGTTCG
CGAGCCGGTCGGCGGCCGCCAACGATGCCGGCGGGCCGCCGCTCACGCCGCGCGCGCGCGCCTGA

Upstream 100 bases:

>100_bases
ACGAAACCAACGCGCGCTACGCGGCCCAGGCAGCACCGCGGCGCGTGCCGCTGCACGCGACCCCCGTCGCGCAGCCGTGA
CGTCAGCCGTGACGTCAGCC

Downstream 100 bases:

>100_bases
GTGCAGCGGGCCTGAGCGCCACGGGGCGCCGGATTGACGGTATGCTCGGCGGGTGCGTTTCGCCCCCGCATGCGAACGCG
TGAGCGCTCGTGTGGCTGGC

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTSAATAVAPAAAGLETITVNSDGVRLAVYLSGPREAPPVILVHGYPDSARVWKRVRETLETRYRVIAYDVRGAGASDAP
ASTSAYRLAQLERDLDAVARATCGRRPFHLVGHDWGSIQSWEAVTDPAMRGRILSYTSISGPCLDHVFRAPMSLGQSLKS
WYIAFFHLPLLPALFWRLGGAALWPWWLRRTERIRAAADPQQVRNGVNGIRLYRANFIARARQPRERYAQAPVQILVPLR
DRYVTPALSENLERWLGVHERELFEASHWTVLREAALIAGRIDRFASRHEPSFASRSAAANDAGGPPLTPRARA

Sequences:

>Translated_314_residues
MTSAATAVAPAAAGLETITVNSDGVRLAVYLSGPREAPPVILVHGYPDSARVWKRVRETLETRYRVIAYDVRGAGASDAP
ASTSAYRLAQLERDLDAVARATCGRRPFHLVGHDWGSIQSWEAVTDPAMRGRILSYTSISGPCLDHVFRAPMSLGQSLKS
WYIAFFHLPLLPALFWRLGGAALWPWWLRRTERIRAAADPQQVRNGVNGIRLYRANFIARARQPRERYAQAPVQILVPLR
DRYVTPALSENLERWLGVHERELFEASHWTVLREAALIAGRIDRFASRHEPSFASRSAAANDAGGPPLTPRARA
>Mature_313_residues
TSAATAVAPAAAGLETITVNSDGVRLAVYLSGPREAPPVILVHGYPDSARVWKRVRETLETRYRVIAYDVRGAGASDAPA
STSAYRLAQLERDLDAVARATCGRRPFHLVGHDWGSIQSWEAVTDPAMRGRILSYTSISGPCLDHVFRAPMSLGQSLKSW
YIAFFHLPLLPALFWRLGGAALWPWWLRRTERIRAAADPQQVRNGVNGIRLYRANFIARARQPRERYAQAPVQILVPLRD
RYVTPALSENLERWLGVHERELFEASHWTVLREAALIAGRIDRFASRHEPSFASRSAAANDAGGPPLTPRARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI218777837, Length=184, Percent_Identity=28.804347826087, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI218777840, Length=268, Percent_Identity=25, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI13376164, Length=268, Percent_Identity=25, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562298, Length=156, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF00106 adh_short [H]

EC number: NA

Molecular weight: Translated: 34905; Mature: 34774

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAATAVAPAAAGLETITVNSDGVRLAVYLSGPREAPPVILVHGYPDSARVWKRVRETL
CCCCHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHH
ETRYRVIAYDVRGAGASDAPASTSAYRLAQLERDLDAVARATCGRRPFHLVGHDWGSIQS
HHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
WEAVTDPAMRGRILSYTSISGPCLDHVFRAPMSLGQSLKSWYIAFFHLPLLPALFWRLGG
CHHHCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AALWPWWLRRTERIRAAADPQQVRNGVNGIRLYRANFIARARQPRERYAQAPVQILVPLR
CHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHCCCEEEEEHH
DRYVTPALSENLERWLGVHERELFEASHWTVLREAALIAGRIDRFASRHEPSFASRSAAA
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
NDAGGPPLTPRARA
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TSAATAVAPAAAGLETITVNSDGVRLAVYLSGPREAPPVILVHGYPDSARVWKRVRETL
CCCHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHH
ETRYRVIAYDVRGAGASDAPASTSAYRLAQLERDLDAVARATCGRRPFHLVGHDWGSIQS
HHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
WEAVTDPAMRGRILSYTSISGPCLDHVFRAPMSLGQSLKSWYIAFFHLPLLPALFWRLGG
CHHHCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AALWPWWLRRTERIRAAADPQQVRNGVNGIRLYRANFIARARQPRERYAQAPVQILVPLR
CHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHCCCEEEEEHH
DRYVTPALSENLERWLGVHERELFEASHWTVLREAALIAGRIDRFASRHEPSFASRSAAA
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
NDAGGPPLTPRARA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]