Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024707
Identifier: 238024707
GI number: 238024707
Start: 1724991
End: 1725989
Strand: Direct
Name: 238024707
Synonym: bglu_2g13440
Alternate gene names: NA
Gene position: 1724991-1725989 (Clockwise)
Preceding gene: 238024706
Following gene: 238024708
Centisome position: 61.01
GC content: 72.87
Gene sequence:
>999_bases ATGACGCGCGCCGGCCTGATCCTGCTGTCCGTCGGGACGGTATTGTTCATCGCGTTGCTGTCGTGGCAGGGCTTCGGCGC CGTGGTGTCGACGCTCGCCACGGCCGGCTGGGGCCTCGCCCTCGTCGCCCTGTTCCATCTGGTGCCGCTCGTGTTCGACG CGCGCGCGATCGCCGTGATGTTTCCGCGCGGCACGCCGGGCGCGTCGCTGCGCGATTCGCTGCGCGCGCGCTGGGTGCTC GAGTCGGTCAACAGCCTGCTGCCGGCCGGCCAGATCGGCGGCCCGGTGCTGATGGCGCGCTATCTCTCGCAAAAGGGCGT GCCGATGCCGCGCGCGGCCGCGGCCGTCACGGTCAGCACCACCATGCAGGCGCTCGCGCAGATCCTGTTCGCGCTGGCCG GGATCGCCACCTTCAGCGTCGGCACCCACAGCGAGGCGGCCGCGCACCTGCGCACCCCGGCGCTGATCGCCACGGCGCTG CTCGGCATCTGCGCGGCGGGCTTCTATCTCGCGCAGCGGCGCGGCCTGTTCGGCCGCGGGCTGCGCATGGTCTCGAAGGC GCTCGGCCCGCGCGACTGGCCCTCGCTCGCCACCCGTGCCGACGCGATCGACTCGGCAGTCGGCGAGCTGTACGGCAAGC GCGACCGCGTCGTGCGCACCTTCTGGTTCAGCTTCGCCGGCTGGGTGCTCGGCACCGGCGAGGTGTGGCTCGCGCTGCAC TTCCTCGGCCACCCGGTCGGGCTCGTCGACGCGCTGCTGCTGGAGAGCGTCGGCCAGGCGATTCGCGGCGCCGCCTTCAT GATTCCCGGCTCGCTCGGCGCGCAGGAAGGCGGCTATCTGCTGCTCGCCCCGCTCGTCGGGCTGCCGCCGGACGCGGCGC TCGCGCTGTCGCTCGCCAAGCGCGCGCGCGAGCTCGCGTTCGGCCTGCCCGGCATCCTGTACCTGCATTTCATTGAACGA AACTGGCAGCGGCGCCGTGCGCCGCAGCTCGCGGACTAA
Upstream 100 bases:
>100_bases GGCCGTGGAAGCGCTTCATCTCGAACATGAAGGACGCGATCGCCTACTTCGGCTTCCGGCAGGTGTTCAAGCAGCTCGCG ACGCGCCGCCCGACCCGCTC
Downstream 100 bases:
>100_bases AGGCCCGCTCCGGGCCACGTCGCAACCAACCTTGCGTGGAGTATTCAATGCGAGCCATCATCCTCGCCGCGGGCCTCGGC CTGCGTCTGCAACTGCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTRAGLILLSVGTVLFIALLSWQGFGAVVSTLATAGWGLALVALFHLVPLVFDARAIAVMFPRGTPGASLRDSLRARWVL ESVNSLLPAGQIGGPVLMARYLSQKGVPMPRAAAAVTVSTTMQALAQILFALAGIATFSVGTHSEAAAHLRTPALIATAL LGICAAGFYLAQRRGLFGRGLRMVSKALGPRDWPSLATRADAIDSAVGELYGKRDRVVRTFWFSFAGWVLGTGEVWLALH FLGHPVGLVDALLLESVGQAIRGAAFMIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELAFGLPGILYLHFIER NWQRRRAPQLAD
Sequences:
>Translated_332_residues MTRAGLILLSVGTVLFIALLSWQGFGAVVSTLATAGWGLALVALFHLVPLVFDARAIAVMFPRGTPGASLRDSLRARWVL ESVNSLLPAGQIGGPVLMARYLSQKGVPMPRAAAAVTVSTTMQALAQILFALAGIATFSVGTHSEAAAHLRTPALIATAL LGICAAGFYLAQRRGLFGRGLRMVSKALGPRDWPSLATRADAIDSAVGELYGKRDRVVRTFWFSFAGWVLGTGEVWLALH FLGHPVGLVDALLLESVGQAIRGAAFMIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELAFGLPGILYLHFIER NWQRRRAPQLAD >Mature_331_residues TRAGLILLSVGTVLFIALLSWQGFGAVVSTLATAGWGLALVALFHLVPLVFDARAIAVMFPRGTPGASLRDSLRARWVLE SVNSLLPAGQIGGPVLMARYLSQKGVPMPRAAAAVTVSTTMQALAQILFALAGIATFSVGTHSEAAAHLRTPALIATALL GICAAGFYLAQRRGLFGRGLRMVSKALGPRDWPSLATRADAIDSAVGELYGKRDRVVRTFWFSFAGWVLGTGEVWLALHF LGHPVGLVDALLLESVGQAIRGAAFMIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELAFGLPGILYLHFIERN WQRRRAPQLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35135; Mature: 35004
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAGLILLSVGTVLFIALLSWQGFGAVVSTLATAGWGLALVALFHLVPLVFDARAIAVM CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEE FPRGTPGASLRDSLRARWVLESVNSLLPAGQIGGPVLMARYLSQKGVPMPRAAAAVTVST ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH TMQALAQILFALAGIATFSVGTHSEAAAHLRTPALIATALLGICAAGFYLAQRRGLFGRG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRMVSKALGPRDWPSLATRADAIDSAVGELYGKRDRVVRTFWFSFAGWVLGTGEVWLALH HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH FLGHPVGLVDALLLESVGQAIRGAAFMIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAK HHCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH RARELAFGLPGILYLHFIERNWQRRRAPQLAD HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRAGLILLSVGTVLFIALLSWQGFGAVVSTLATAGWGLALVALFHLVPLVFDARAIAVM CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEE FPRGTPGASLRDSLRARWVLESVNSLLPAGQIGGPVLMARYLSQKGVPMPRAAAAVTVST ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH TMQALAQILFALAGIATFSVGTHSEAAAHLRTPALIATALLGICAAGFYLAQRRGLFGRG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRMVSKALGPRDWPSLATRADAIDSAVGELYGKRDRVVRTFWFSFAGWVLGTGEVWLALH HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH FLGHPVGLVDALLLESVGQAIRGAAFMIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAK HHCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH RARELAFGLPGILYLHFIERNWQRRRAPQLAD HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA