Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024661
Identifier: 238024661
GI number: 238024661
Start: 1648222
End: 1648635
Strand: Direct
Name: 238024661
Synonym: bglu_2g12840
Alternate gene names: NA
Gene position: 1648222-1648635 (Clockwise)
Preceding gene: 238024660
Following gene: 238024662
Centisome position: 58.3
GC content: 61.59
Gene sequence:
>414_bases ATGATCGACAGATCAGCGTGGAGTGAGCGGTACAAGTTGGGGTTGGCTGCCATCAAGACCCTGGAGCCCGACAATGGCGA TCTCGTGCTGAACAAGCTGCGCGAGGTGTCGCCGCGTTATCACGACATCAACGTCGAGTCCTACGGCGACTACTTCGGCG ACGAGCGGCTGTCGATCAAGCTGCGCACGCTGATCACGTTGACCACGCTGGCGGCGATCAACGCGTATCCGGGGCTGATC CAGTTCCACGCGAAGGCCGCGCTCGAGGTGGGTTGGACGCCCGACGAGATCTTCGCAGCGCTCGAACAGAATTCACTGTT CGCCGGCTACCCCTACGCGATCAGTTCCATCTACACGGTACGTGAGCTGTTCATCCAGCTCGGCGTGCTCGCCACCGAGC CGCGCGCGGAATGA
Upstream 100 bases:
>100_bases GAACCCTGACGGCCTTCGGAACGCAGGTGCCGAACATCGAATCCGGCTATTCGTGACACCGTGAAATCGAGTTTCAACCG ACAACCAATGGGAGTGGTCC
Downstream 100 bases:
>100_bases GCCGCGCCCCCACCCGCCTTCACCAGGAACGCTAGATGAACATTGTCGGCATATCGGCTCACTATCACGACGCGGCCTGC TGTCTGCTCGTCAACGGCAA
Product: carboxymuconolactone decarboxylase
Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MIDRSAWSERYKLGLAAIKTLEPDNGDLVLNKLREVSPRYHDINVESYGDYFGDERLSIKLRTLITLTTLAAINAYPGLI QFHAKAALEVGWTPDEIFAALEQNSLFAGYPYAISSIYTVRELFIQLGVLATEPRAE
Sequences:
>Translated_137_residues MIDRSAWSERYKLGLAAIKTLEPDNGDLVLNKLREVSPRYHDINVESYGDYFGDERLSIKLRTLITLTTLAAINAYPGLI QFHAKAALEVGWTPDEIFAALEQNSLFAGYPYAISSIYTVRELFIQLGVLATEPRAE >Mature_137_residues MIDRSAWSERYKLGLAAIKTLEPDNGDLVLNKLREVSPRYHDINVESYGDYFGDERLSIKLRTLITLTTLAAINAYPGLI QFHAKAALEVGWTPDEIFAALEQNSLFAGYPYAISSIYTVRELFIQLGVLATEPRAE
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.44
Molecular weight: Translated: 15396; Mature: 15396
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRSAWSERYKLGLAAIKTLEPDNGDLVLNKLREVSPRYHDINVESYGDYFGDERLSIK CCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEE LRTLITLTTLAAINAYPGLIQFHAKAALEVGWTPDEIFAALEQNSLFAGYPYAISSIYTV HHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCHHHHHHHHHCCCEECCCHHHHHHHHHH RELFIQLGVLATEPRAE HHHHHHHCCCCCCCCCC >Mature Secondary Structure MIDRSAWSERYKLGLAAIKTLEPDNGDLVLNKLREVSPRYHDINVESYGDYFGDERLSIK CCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEE LRTLITLTTLAAINAYPGLIQFHAKAALEVGWTPDEIFAALEQNSLFAGYPYAISSIYTV HHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCHHHHHHHHHCCCEECCCHHHHHHHHHH RELFIQLGVLATEPRAE HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate
Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA