Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024645
Identifier: 238024645
GI number: 238024645
Start: 1621456
End: 1623102
Strand: Direct
Name: 238024645
Synonym: bglu_2g12600
Alternate gene names: NA
Gene position: 1621456-1623102 (Clockwise)
Preceding gene: 238024644
Following gene: 238024646
Centisome position: 57.35
GC content: 66.42
Gene sequence:
>1647_bases ATGAATCCCGGTTTCCTTACCCAACTCGCCCAATCCAACCAGAGATCCGCCGAAGTGAAAACCCTGTCGCTCCGGGGACG CGCACCGCGTCCCGCCCTGCTCGCGGTAGCGCTCGCCGTCGTGTGGCTGTCCGGCTGCGCCGTCAAGCCCGCCCCGTTCT CCGATGCCGAGCGCGCCGAGACGGCCCGCACCGATCGCATGACGATGTTCACGAATCAGCAGCCGGTGAGCGGGCCGATC ACGCTCGACGAGGCGATGGCGCGCGCGATTCGCTACAACCTCGATCATCGCCTGAAGATGATGGAAGAGGCGCTCGCGCA GCGTCAGCTCGACCTGTCGAACTTCGACCTGCTGCCGAAGCTGACCGCCGCGGCCGGCTACACGAACCGCAATCACGAAC TGGCGTCGTCCTCCGAAGGCCTCTTTACGCGCGAGGAATCGCTGATTCCCTCGTACTCGACCGACAAGAACAGCCGCACC GCCGACCTGAACCTGTCATGGAACATCCTCGACTTCGGCGTGAGCTACTTCGAGGCCAAGGAACAGGCCGACCACGTGCT GGTGCTCGAGCAGCGCCGCCGCAAGGTCGTGCAGCTGATGATGCAGCAGGTGCGCGAGGCGTACTGGCAGGCGGTGGGCG CGCAGCGTCTGCACGACCGCATCGGGCCGCTGCTCGAACAGGCGAAGGGCGCGCTCGACGATTCGCGCGCGGCCCAGCAG CAGGGCCTGCGCTCCCCGGTGGAAACGCTCAACTACCAGCGCTCGCTGCTCGACCTGATGCGCCAGCTCGAAGCCGTGCG CGACCAGCTCGAGCAAGCCAAGCCGCGCCTGGCCTCGCTGATGAACCTCGAACCGGGCAAGGACTTCACGCTCGCCGCGA GCGACGACTTCCGCGTGCCGAATTTCGACATGGCGATGCCGCAGATGGAGGACATGGCGCTGCAGCGCCGTCCGGAACTC GTCGAGGCCAGCTACAACGAGCGCATCAGCGTCAATGAAACGCACAAGGCGATCGCCAAGCTGCTGCCCGGCATCGAGTT CAGCCTCGGCGCGCACTACGACAGCAACAGCTTCCTGGTCTACAACACGTGGCGCTCGGCCGGCATCAGCGTGAGCTGGA ACCTGCTGAACCTGCTCAACGCGCGCAACATCCGCGGCACCGCGCAGGCCCAGCTCGAGGTGGCGAAGATGCAGCGCATG GCGCTCAGCATGGCCGTGCTCACGCAGGTCCACGTCGCGCGCAGCGAACTCGGCGCCAAGACGCGCCAGTTCGACCTGCT CAAGCAGTTGAACGACATCGATCAGCAGATCCTCGAGCACACCCACAACGCCACCGTGGCCAACGCCCAGGGCCGGCTCG AGGAAATCCGCGTGGCCACCGCCGCGATGATGTCCGAGCTGCGCCTGTACCAGAGCTACGGCGAGCTCGAAAGCGCCTAC GGCCAGATGCTGGCCACGCTCGGCCTCGATCCGGTGCCCGCCAAGCTCAACGGCAACGACATCGCTTCACTGACGCAATC GATCGGCGAGGAGCAGAAGCGCTGGGACGACATTGCCCGGCACGGCGTCCAGGCCGCCGCCCTCGCGCAACCGGGTCCGA CGATCGCCGCGGCAGCGGCATTGCCGGCGGGAGTCTCGCAGAAATGA
Upstream 100 bases:
>100_bases CGCTGGCCGCGCAGTTCGCCAGCGCGCATGCCGTCTTGCATGTGGCCCGCTCCGACGCGGTGCCGTCCGAACCCCGGCAG GCCACCACGGAGCGCCGCTC
Downstream 100 bases:
>100_bases CGCAGTACATGACCTACCGGGCAGCGGCCGCAGTCGCGCTGCTCGTCGCAGCACAGTTCGCGCGGGCCGCCACGGCGGCG CCCGCCACGCCTGCCGCGCG
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Protein; Efflux Outer Membrane Protein; Outer Membrane Protein-Like; Outer Membrane Efflux Protein Superfamily
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MNPGFLTQLAQSNQRSAEVKTLSLRGRAPRPALLAVALAVVWLSGCAVKPAPFSDAERAETARTDRMTMFTNQQPVSGPI TLDEAMARAIRYNLDHRLKMMEEALAQRQLDLSNFDLLPKLTAAAGYTNRNHELASSSEGLFTREESLIPSYSTDKNSRT ADLNLSWNILDFGVSYFEAKEQADHVLVLEQRRRKVVQLMMQQVREAYWQAVGAQRLHDRIGPLLEQAKGALDDSRAAQQ QGLRSPVETLNYQRSLLDLMRQLEAVRDQLEQAKPRLASLMNLEPGKDFTLAASDDFRVPNFDMAMPQMEDMALQRRPEL VEASYNERISVNETHKAIAKLLPGIEFSLGAHYDSNSFLVYNTWRSAGISVSWNLLNLLNARNIRGTAQAQLEVAKMQRM ALSMAVLTQVHVARSELGAKTRQFDLLKQLNDIDQQILEHTHNATVANAQGRLEEIRVATAAMMSELRLYQSYGELESAY GQMLATLGLDPVPAKLNGNDIASLTQSIGEEQKRWDDIARHGVQAAALAQPGPTIAAAAALPAGVSQK
Sequences:
>Translated_548_residues MNPGFLTQLAQSNQRSAEVKTLSLRGRAPRPALLAVALAVVWLSGCAVKPAPFSDAERAETARTDRMTMFTNQQPVSGPI TLDEAMARAIRYNLDHRLKMMEEALAQRQLDLSNFDLLPKLTAAAGYTNRNHELASSSEGLFTREESLIPSYSTDKNSRT ADLNLSWNILDFGVSYFEAKEQADHVLVLEQRRRKVVQLMMQQVREAYWQAVGAQRLHDRIGPLLEQAKGALDDSRAAQQ QGLRSPVETLNYQRSLLDLMRQLEAVRDQLEQAKPRLASLMNLEPGKDFTLAASDDFRVPNFDMAMPQMEDMALQRRPEL VEASYNERISVNETHKAIAKLLPGIEFSLGAHYDSNSFLVYNTWRSAGISVSWNLLNLLNARNIRGTAQAQLEVAKMQRM ALSMAVLTQVHVARSELGAKTRQFDLLKQLNDIDQQILEHTHNATVANAQGRLEEIRVATAAMMSELRLYQSYGELESAY GQMLATLGLDPVPAKLNGNDIASLTQSIGEEQKRWDDIARHGVQAAALAQPGPTIAAAAALPAGVSQK >Mature_548_residues MNPGFLTQLAQSNQRSAEVKTLSLRGRAPRPALLAVALAVVWLSGCAVKPAPFSDAERAETARTDRMTMFTNQQPVSGPI TLDEAMARAIRYNLDHRLKMMEEALAQRQLDLSNFDLLPKLTAAAGYTNRNHELASSSEGLFTREESLIPSYSTDKNSRT ADLNLSWNILDFGVSYFEAKEQADHVLVLEQRRRKVVQLMMQQVREAYWQAVGAQRLHDRIGPLLEQAKGALDDSRAAQQ QGLRSPVETLNYQRSLLDLMRQLEAVRDQLEQAKPRLASLMNLEPGKDFTLAASDDFRVPNFDMAMPQMEDMALQRRPEL VEASYNERISVNETHKAIAKLLPGIEFSLGAHYDSNSFLVYNTWRSAGISVSWNLLNLLNARNIRGTAQAQLEVAKMQRM ALSMAVLTQVHVARSELGAKTRQFDLLKQLNDIDQQILEHTHNATVANAQGRLEEIRVATAAMMSELRLYQSYGELESAY GQMLATLGLDPVPAKLNGNDIASLTQSIGEEQKRWDDIARHGVQAAALAQPGPTIAAAAALPAGVSQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60857; Mature: 60857
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPGFLTQLAQSNQRSAEVKTLSLRGRAPRPALLAVALAVVWLSGCAVKPAPFSDAERAE CCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH TARTDRMTMFTNQQPVSGPITLDEAMARAIRYNLDHRLKMMEEALAQRQLDLSNFDLLPK HHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHH LTAAAGYTNRNHELASSSEGLFTREESLIPSYSTDKNSRTADLNLSWNILDFGVSYFEAK HHHHCCCCCCCCCCCCCCCCCEECHHHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHH EQADHVLVLEQRRRKVVQLMMQQVREAYWQAVGAQRLHDRIGPLLEQAKGALDDSRAAQQ HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH QGLRSPVETLNYQRSLLDLMRQLEAVRDQLEQAKPRLASLMNLEPGKDFTLAASDDFRVP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC NFDMAMPQMEDMALQRRPELVEASYNERISVNETHKAIAKLLPGIEFSLGAHYDSNSFLV CCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEE YNTWRSAGISVSWNLLNLLNARNIRGTAQAQLEVAKMQRMALSMAVLTQVHVARSELGAK EECCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TRQFDLLKQLNDIDQQILEHTHNATVANAQGRLEEIRVATAAMMSELRLYQSYGELESAY HHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQMLATLGLDPVPAKLNGNDIASLTQSIGEEQKRWDDIARHGVQAAALAQPGPTIAAAAA HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHH LPAGVSQK CCCCCCCC >Mature Secondary Structure MNPGFLTQLAQSNQRSAEVKTLSLRGRAPRPALLAVALAVVWLSGCAVKPAPFSDAERAE CCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH TARTDRMTMFTNQQPVSGPITLDEAMARAIRYNLDHRLKMMEEALAQRQLDLSNFDLLPK HHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHH LTAAAGYTNRNHELASSSEGLFTREESLIPSYSTDKNSRTADLNLSWNILDFGVSYFEAK HHHHCCCCCCCCCCCCCCCCCEECHHHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHH EQADHVLVLEQRRRKVVQLMMQQVREAYWQAVGAQRLHDRIGPLLEQAKGALDDSRAAQQ HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH QGLRSPVETLNYQRSLLDLMRQLEAVRDQLEQAKPRLASLMNLEPGKDFTLAASDDFRVP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC NFDMAMPQMEDMALQRRPELVEASYNERISVNETHKAIAKLLPGIEFSLGAHYDSNSFLV CCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEE YNTWRSAGISVSWNLLNLLNARNIRGTAQAQLEVAKMQRMALSMAVLTQVHVARSELGAK EECCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TRQFDLLKQLNDIDQQILEHTHNATVANAQGRLEEIRVATAAMMSELRLYQSYGELESAY HHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQMLATLGLDPVPAKLNGNDIASLTQSIGEEQKRWDDIARHGVQAAALAQPGPTIAAAAA HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHH LPAGVSQK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA