Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is estB [H]
Identifier: 238024600
GI number: 238024600
Start: 1549949
End: 1551115
Strand: Reverse
Name: estB [H]
Synonym: bglu_2g12150
Alternate gene names: 238024600
Gene position: 1551115-1549949 (Counterclockwise)
Preceding gene: 238024603
Following gene: 238024599
Centisome position: 54.86
GC content: 73.18
Gene sequence:
>1167_bases ATGACGCAGACTTCGCCCGCCTCGATCGATCCCGTTGCCCTGTCGGCCCGCCTCGACGCCGTAGTCGAGCGCGCGCTGCG CGAGCGCCGCGTGGTGGGCGCGGTGGGCATCGTCGCGCAGCACGGCAAGCTGCTGTACCGGCGCGCGCACGGCCTGGCCG ACCGCGAGGCGCACCGGCCGATGCGCGAGGACACGCTGTTCCGCCTGGCCTCGGTGACCAAGCCGATCGTCGCGCTCGCG GCGCTGCGGCTCGTGGCGAGCAAGGCGCTGGCGCTCGACGCGCCCGTCACGCGCTGGCTGCCCGGGTTCCGGCCGAAGCT CGAGAACGGCGAGGCGCCCGAGATGACGATCCACCATCTGCTCACGCATACGGCCGGCCTCGGCTACTGGCTGCTCGACG GGCCGGGCTCGCTATACGACCGGCTCGGTATTTCCGACGGGCTCGATCTTTGCGACTTCGGCCTCGACGAGAATCTGCGG CGGCTGGCCGAGGCGCCGCTGGCGTTCGCGCCGGGCACCGGCTGGCAGTATTCGCTCGCGCTCGACGTGCTCGGCGCGGT GATCGAGCGTGCTACCGGAACGACGCTGGCGCAGGCGGTGGCGACGCTGGTGGGCGAGCCGCTCGGGCTGCGTGACAGCG GGTTCGTGTCGAACCAGCCCGAGCGGTTCGCGACGCCGTACTACGGCGGCAGCCCGGAGCCGGTGCGGATGGCCGACGGC GTGGACGTGCCGATGCCCGAAGGGCAGGGCGCGGCGGTGCGCTTCGCGCCGTCGCGCGTGTTCGAGCCGGGCGCGTATCC GTCCGGCGGCGCGGGGATGTACGGCTGCGCCGACGACGTGCTGCGGGTGCTGGAGGCGATTCGCGACGGCGGGCGCTTTC TGCCCGACGCGCTTGCCGAGGCGGCGCGGCGCGATCAGGTGGGCGCCGCGGCCGAGACGCGCGGGCCGGGCTGGGGCTTT GGCTATCTCGGGGCGGTGCTGAGCGATCCCGCGCTGGCGCAGACGCGGATGGCGGCCGGCACGCTGGCCTGGGGCGGGGT GTACGGCCACTCGTGGTTCGTCGATCCGGCGTGGGGGCTGAGCGTGCTGCTGCTGACCAATACCGCCTATGAGGGGATGT CGGGGGCATTGAAGATCGAGTTCGGCGAGGCCGTTTATGCGGGGTGA
Upstream 100 bases:
>100_bases GGCAGGCGCGCGGGCGCGAGCGATCCATCAAAATCGGACCGTGGCGGGCATGGGGCTGATCTGTTTAGAATCGAGACTTT CCCGTTGCGAGACCCTTGCC
Downstream 100 bases:
>100_bases GCGGGGCAGGGCGCTGTCGCGTTGGCGGAGTATGTCCGCAAGCGGTGCGAGCGCAACCTGCATGTTTCATGCCGCAGACG GATTCTGGGTGGCCTCGGGC
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTQTSPASIDPVALSARLDAVVERALRERRVVGAVGIVAQHGKLLYRRAHGLADREAHRPMREDTLFRLASVTKPIVALA ALRLVASKALALDAPVTRWLPGFRPKLENGEAPEMTIHHLLTHTAGLGYWLLDGPGSLYDRLGISDGLDLCDFGLDENLR RLAEAPLAFAPGTGWQYSLALDVLGAVIERATGTTLAQAVATLVGEPLGLRDSGFVSNQPERFATPYYGGSPEPVRMADG VDVPMPEGQGAAVRFAPSRVFEPGAYPSGGAGMYGCADDVLRVLEAIRDGGRFLPDALAEAARRDQVGAAAETRGPGWGF GYLGAVLSDPALAQTRMAAGTLAWGGVYGHSWFVDPAWGLSVLLLTNTAYEGMSGALKIEFGEAVYAG
Sequences:
>Translated_388_residues MTQTSPASIDPVALSARLDAVVERALRERRVVGAVGIVAQHGKLLYRRAHGLADREAHRPMREDTLFRLASVTKPIVALA ALRLVASKALALDAPVTRWLPGFRPKLENGEAPEMTIHHLLTHTAGLGYWLLDGPGSLYDRLGISDGLDLCDFGLDENLR RLAEAPLAFAPGTGWQYSLALDVLGAVIERATGTTLAQAVATLVGEPLGLRDSGFVSNQPERFATPYYGGSPEPVRMADG VDVPMPEGQGAAVRFAPSRVFEPGAYPSGGAGMYGCADDVLRVLEAIRDGGRFLPDALAEAARRDQVGAAAETRGPGWGF GYLGAVLSDPALAQTRMAAGTLAWGGVYGHSWFVDPAWGLSVLLLTNTAYEGMSGALKIEFGEAVYAG >Mature_387_residues TQTSPASIDPVALSARLDAVVERALRERRVVGAVGIVAQHGKLLYRRAHGLADREAHRPMREDTLFRLASVTKPIVALAA LRLVASKALALDAPVTRWLPGFRPKLENGEAPEMTIHHLLTHTAGLGYWLLDGPGSLYDRLGISDGLDLCDFGLDENLRR LAEAPLAFAPGTGWQYSLALDVLGAVIERATGTTLAQAVATLVGEPLGLRDSGFVSNQPERFATPYYGGSPEPVRMADGV DVPMPEGQGAAVRFAPSRVFEPGAYPSGGAGMYGCADDVLRVLEAIRDGGRFLPDALAEAARRDQVGAAAETRGPGWGFG YLGAVLSDPALAQTRMAAGTLAWGGVYGHSWFVDPAWGLSVLLLTNTAYEGMSGALKIEFGEAVYAG
Specific function: Acts on short-chain (C4-C6) fatty acid esters and triglycerides, including tertiary alcohol esters. Activity on p- nitrophenyl esters is generally higher than on o-nitrophenyl esters. Lacks beta-lactamase activity; it hydrolyzes the ester bond of cephalos
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI115533026, Length=202, Percent_Identity=26.7326732673267, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41087; Mature: 40956
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTSPASIDPVALSARLDAVVERALRERRVVGAVGIVAQHGKLLYRRAHGLADREAHRP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC MREDTLFRLASVTKPIVALAALRLVASKALALDAPVTRWLPGFRPKLENGEAPEMTIHHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHH LTHTAGLGYWLLDGPGSLYDRLGISDGLDLCDFGLDENLRRLAEAPLAFAPGTGWQYSLA HHHHCCCCEEEECCCHHHHHHCCCCCCCHHHHCCCCHHHHHHHHCCCEECCCCCCCHHHH LDVLGAVIERATGTTLAQAVATLVGEPLGLRDSGFVSNQPERFATPYYGGSPEPVRMADG HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCC VDVPMPEGQGAAVRFAPSRVFEPGAYPSGGAGMYGCADDVLRVLEAIRDGGRFLPDALAE CCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH AARRDQVGAAAETRGPGWGFGYLGAVLSDPALAQTRMAAGTLAWGGVYGHSWFVDPAWGL HHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCEECCCCCCC SVLLLTNTAYEGMSGALKIEFGEAVYAG EEEEEECCHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure TQTSPASIDPVALSARLDAVVERALRERRVVGAVGIVAQHGKLLYRRAHGLADREAHRP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC MREDTLFRLASVTKPIVALAALRLVASKALALDAPVTRWLPGFRPKLENGEAPEMTIHHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHH LTHTAGLGYWLLDGPGSLYDRLGISDGLDLCDFGLDENLRRLAEAPLAFAPGTGWQYSLA HHHHCCCCEEEECCCHHHHHHCCCCCCCHHHHCCCCHHHHHHHHCCCEECCCCCCCHHHH LDVLGAVIERATGTTLAQAVATLVGEPLGLRDSGFVSNQPERFATPYYGGSPEPVRMADG HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCC VDVPMPEGQGAAVRFAPSRVFEPGAYPSGGAGMYGCADDVLRVLEAIRDGGRFLPDALAE CCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH AARRDQVGAAAETRGPGWGFGYLGAVLSDPALAQTRMAAGTLAWGGVYGHSWFVDPAWGL HHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCEECCCCCCC SVLLLTNTAYEGMSGALKIEFGEAVYAG EEEEEECCHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11472796; 11847270 [H]