Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is luxQ [H]
Identifier: 238024565
GI number: 238024565
Start: 1492413
End: 1494227
Strand: Reverse
Name: luxQ [H]
Synonym: bglu_2g11720
Alternate gene names: 238024565
Gene position: 1494227-1492413 (Counterclockwise)
Preceding gene: 238024566
Following gene: 238024564
Centisome position: 52.85
GC content: 67.82
Gene sequence:
>1815_bases ATGACGCGGCAGCAGTGGAGAAACAAGAAGATCATCCTGATCCTGGGCTGGCTCTGGATCATGGGCTTCGCGGCATGGGC GTTCCTGCTCTGGGATCTGCTCGCCACCTCGGTCAACGAAGGCGTGCGCGAAGGGCCGCGCGAGGGGGTGTTCTGGACCG CCGCGCAATATCGCAACGTCTATGCGCGCTTCGACCGGCAGCTGATTCTCTACGCGACGCATCGCGACGACGACTTCGAT CACGTGCAGATGCAGCTCGACAGCCTGTCGGTGTCGTTCGGCTTCCTGCAGCGGCCCTCCGAAGTGTCGACGTACTGGCT GCGCATCCCGCGCGCGCGCAAGGAGATCGACGCGCTCGGCGAATTCATGGCGCACCTGAAGCGCGAGGTGCCGCGCCTGC GCGATGCGCCGCAGAACGCGCAGCAGATGGTCGACGAAGTCGGCGCGCGCTGGCCCGAGGTCAACGGCCTCGCCAACTAC TTCCGCGCGATCGAAATCGAGCAGCGTGACTTCATGTTTCATCAGCTGAAGAACCGGCAGCGCGCGATCCTGATCCTCGG CATCGTGCTCGGCGTGATCTTGTGCGCGCTGTTCCTGCTGCTGTTCTATACGATGCGCACGCGCGACGACCTGCTCGAAC GGCAAAACGCGGCGCTCGACGCGGAGCGCCAGGCCTCGGACCGTGCATTCGAGATGATCGAGGCGAAGAACGCATTCCTC GGGATGGTCAGCCACGAACTGCGCACGCCGCTGCAGGCGATCAGCGGATCGATCGAGATCCTGCTCGCCCGGGCGCAGTC CGAAGCGAACCTGAAGACCATCCGGCGGCTGCAGAACTCCGCGTTGTCGCTGGAGGCGCTCGTCAAGGAGCTCACCGACT ACATCAAGCTGCGTTCGACCAAGCGCATCGTCAAGCTGGATACCGTCGGCATCGCGCCGCTGCTCGCCGAAGTGCTCGAA CCGCTGCGCGGCAAGGTTGCGGCCAAGCGGATCACGATCACGCGACGCATCGAGCCGGCGGGTCTTGCGATCCGCTCCGA TCGCACGCTGCTGCGGCAGGTGCTGTCGAACCTGATCGAGAACGCGGTCAAGTACACGCTCGGCGGCTCGATCGAGGTGG CGGTCACCCTCGAGGACGCGCGCGGCCAGCAGGCGAGGATCGCCGTGCGCGATACCGGGGCCGGCATCGCGAAGCAGCAT CTGCCGAAGATATTCGAGCCGTTCTATCGTGCGAACGACCCGGGCGGGCCGAGCGTGGACGGGATCGGCATGGGGCTCGC GGTGGTGCGCGAAATCGTGACCACGCTGCGCGGCCGGGTGGAGGTTCGCAGCGTGGTGGGCGAAGGCAGCGAGTTCGTCG TGACGCTGCCGGTCGAGGTGCCGGGCGCCGATCCGGCCGGCAACGCGGCGGCCGAGGTGCCGGCGCCGCCGCTCGCGCTC GCTCGCCGCGGCTGGCGCGCGCTGGTGATCGACGACAACGACAACGCGCGTGAAACGCTCGGCGCGATGCTGTCGGCGCT CGGCATCGACGTCGATCTGTGCGACACCGGGCAGGACGGCATCGCGCGCGCCGGCACGCGCCGCTACCACCTCGTGATGC TCGATCTCGAACTGCCGGACCTGAGCGGATTCGAGGTGGCGCGGCGCATTCGCGCGCTGGCGGAGCCAGACGGCGGCGCG CGGCCGGCGCTCCTCGGGGTGAGCGCCTACGAGTCGGCCGCGCTGGACGAGCAGCGGCACGTGTTCGACGCGTTCCTGCC GAAGCCCGTCCATCTCAGCGAGCTGCGCTCCGTGGTCGAGCGCCTGCTCGCCTGA
Upstream 100 bases:
>100_bases TGGCTCATGTATCCGCGCGACGAGTATCCCGATGAGCTGATGACGCCGCTTGGCGAGGCCAAGTTCGCGTGGCAGGTCGT CGGTCTGACCGTGAAGTGAG
Downstream 100 bases:
>100_bases GGCCCCGGCAGCAGGCGCCTCGGGCCAGCGCGGGCCAGCACGGAGCAGCACGGAGCAGCACGGAGCAGCACGGGCGGGGC CGGCTCGGCTCACGCGCAAG
Product: periplasmic sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 603
Protein sequence:
>604_residues MTRQQWRNKKIILILGWLWIMGFAAWAFLLWDLLATSVNEGVREGPREGVFWTAAQYRNVYARFDRQLILYATHRDDDFD HVQMQLDSLSVSFGFLQRPSEVSTYWLRIPRARKEIDALGEFMAHLKREVPRLRDAPQNAQQMVDEVGARWPEVNGLANY FRAIEIEQRDFMFHQLKNRQRAILILGIVLGVILCALFLLLFYTMRTRDDLLERQNAALDAERQASDRAFEMIEAKNAFL GMVSHELRTPLQAISGSIEILLARAQSEANLKTIRRLQNSALSLEALVKELTDYIKLRSTKRIVKLDTVGIAPLLAEVLE PLRGKVAAKRITITRRIEPAGLAIRSDRTLLRQVLSNLIENAVKYTLGGSIEVAVTLEDARGQQARIAVRDTGAGIAKQH LPKIFEPFYRANDPGGPSVDGIGMGLAVVREIVTTLRGRVEVRSVVGEGSEFVVTLPVEVPGADPAGNAAAEVPAPPLAL ARRGWRALVIDDNDNARETLGAMLSALGIDVDLCDTGQDGIARAGTRRYHLVMLDLELPDLSGFEVARRIRALAEPDGGA RPALLGVSAYESAALDEQRHVFDAFLPKPVHLSELRSVVERLLA
Sequences:
>Translated_604_residues MTRQQWRNKKIILILGWLWIMGFAAWAFLLWDLLATSVNEGVREGPREGVFWTAAQYRNVYARFDRQLILYATHRDDDFD HVQMQLDSLSVSFGFLQRPSEVSTYWLRIPRARKEIDALGEFMAHLKREVPRLRDAPQNAQQMVDEVGARWPEVNGLANY FRAIEIEQRDFMFHQLKNRQRAILILGIVLGVILCALFLLLFYTMRTRDDLLERQNAALDAERQASDRAFEMIEAKNAFL GMVSHELRTPLQAISGSIEILLARAQSEANLKTIRRLQNSALSLEALVKELTDYIKLRSTKRIVKLDTVGIAPLLAEVLE PLRGKVAAKRITITRRIEPAGLAIRSDRTLLRQVLSNLIENAVKYTLGGSIEVAVTLEDARGQQARIAVRDTGAGIAKQH LPKIFEPFYRANDPGGPSVDGIGMGLAVVREIVTTLRGRVEVRSVVGEGSEFVVTLPVEVPGADPAGNAAAEVPAPPLAL ARRGWRALVIDDNDNARETLGAMLSALGIDVDLCDTGQDGIARAGTRRYHLVMLDLELPDLSGFEVARRIRALAEPDGGA RPALLGVSAYESAALDEQRHVFDAFLPKPVHLSELRSVVERLLA >Mature_603_residues TRQQWRNKKIILILGWLWIMGFAAWAFLLWDLLATSVNEGVREGPREGVFWTAAQYRNVYARFDRQLILYATHRDDDFDH VQMQLDSLSVSFGFLQRPSEVSTYWLRIPRARKEIDALGEFMAHLKREVPRLRDAPQNAQQMVDEVGARWPEVNGLANYF RAIEIEQRDFMFHQLKNRQRAILILGIVLGVILCALFLLLFYTMRTRDDLLERQNAALDAERQASDRAFEMIEAKNAFLG MVSHELRTPLQAISGSIEILLARAQSEANLKTIRRLQNSALSLEALVKELTDYIKLRSTKRIVKLDTVGIAPLLAEVLEP LRGKVAAKRITITRRIEPAGLAIRSDRTLLRQVLSNLIENAVKYTLGGSIEVAVTLEDARGQQARIAVRDTGAGIAKQHL PKIFEPFYRANDPGGPSVDGIGMGLAVVREIVTTLRGRVEVRSVVGEGSEFVVTLPVEVPGADPAGNAAAEVPAPPLALA RRGWRALVIDDNDNARETLGAMLSALGIDVDLCDTGQDGIARAGTRRYHLVMLDLELPDLSGFEVARRIRALAEPDGGAR PALLGVSAYESAALDEQRHVFDAFLPKPVHLSELRSVVERLLA
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=338, Percent_Identity=27.810650887574, Blast_Score=143, Evalue=4e-35, Organism=Escherichia coli, GI48994928, Length=402, Percent_Identity=30.3482587064677, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI87081816, Length=399, Percent_Identity=29.3233082706767, Blast_Score=122, Evalue=9e-29, Organism=Escherichia coli, GI145693157, Length=240, Percent_Identity=31.25, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1786600, Length=325, Percent_Identity=30.1538461538462, Blast_Score=109, Evalue=6e-25, Organism=Escherichia coli, GI1789149, Length=245, Percent_Identity=28.9795918367347, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1790436, Length=321, Percent_Identity=27.1028037383178, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1786783, Length=337, Percent_Identity=25.5192878338279, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787894, Length=240, Percent_Identity=29.1666666666667, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1786912, Length=241, Percent_Identity=30.7053941908714, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788393, Length=222, Percent_Identity=28.3783783783784, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI87082128, Length=244, Percent_Identity=28.6885245901639, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1790861, Length=217, Percent_Identity=30.4147465437788, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788549, Length=231, Percent_Identity=27.7056277056277, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790346, Length=227, Percent_Identity=26.431718061674, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1789808, Length=252, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1790551, Length=235, Percent_Identity=27.2340425531915, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 67376; Mature: 67245
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQQWRNKKIILILGWLWIMGFAAWAFLLWDLLATSVNEGVREGPREGVFWTAAQYRNV CCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH YARFDRQLILYATHRDDDFDHVQMQLDSLSVSFGFLQRPSEVSTYWLRIPRARKEIDALG HHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH EFMAHLKREVPRLRDAPQNAQQMVDEVGARWPEVNGLANYFRAIEIEQRDFMFHQLKNRQ HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEHHHHHHHHHHCCCC RAILILGIVLGVILCALFLLLFYTMRTRDDLLERQNAALDAERQASDRAFEMIEAKNAFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH GMVSHELRTPLQAISGSIEILLARAQSEANLKTIRRLQNSALSLEALVKELTDYIKLRST HHHHHHHHCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KRIVKLDTVGIAPLLAEVLEPLRGKVAAKRITITRRIEPAGLAIRSDRTLLRQVLSNLIE CCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCHHHHHHHHHHHHH NAVKYTLGGSIEVAVTLEDARGQQARIAVRDTGAGIAKQHLPKIFEPFYRANDPGGPSVD HHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC GIGMGLAVVREIVTTLRGRVEVRSVVGEGSEFVVTLPVEVPGADPAGNAAAEVPAPPLAL CHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHH ARRGWRALVIDDNDNARETLGAMLSALGIDVDLCDTGQDGIARAGTRRYHLVMLDLELPD HHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEEEEEEECCC LSGFEVARRIRALAEPDGGARPALLGVSAYESAALDEQRHVFDAFLPKPVHLSELRSVVE CCHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RLLA HHCC >Mature Secondary Structure TRQQWRNKKIILILGWLWIMGFAAWAFLLWDLLATSVNEGVREGPREGVFWTAAQYRNV CCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH YARFDRQLILYATHRDDDFDHVQMQLDSLSVSFGFLQRPSEVSTYWLRIPRARKEIDALG HHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH EFMAHLKREVPRLRDAPQNAQQMVDEVGARWPEVNGLANYFRAIEIEQRDFMFHQLKNRQ HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEHHHHHHHHHHCCCC RAILILGIVLGVILCALFLLLFYTMRTRDDLLERQNAALDAERQASDRAFEMIEAKNAFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH GMVSHELRTPLQAISGSIEILLARAQSEANLKTIRRLQNSALSLEALVKELTDYIKLRST HHHHHHHHCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KRIVKLDTVGIAPLLAEVLEPLRGKVAAKRITITRRIEPAGLAIRSDRTLLRQVLSNLIE CCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCHHHHHHHHHHHHH NAVKYTLGGSIEVAVTLEDARGQQARIAVRDTGAGIAKQHLPKIFEPFYRANDPGGPSVD HHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC GIGMGLAVVREIVTTLRGRVEVRSVVGEGSEFVVTLPVEVPGADPAGNAAAEVPAPPLAL CHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHH ARRGWRALVIDDNDNARETLGAMLSALGIDVDLCDTGQDGIARAGTRRYHLVMLDLELPD HHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEEEEEEECCC LSGFEVARRIRALAEPDGGARPALLGVSAYESAALDEQRHVFDAFLPKPVHLSELRSVVE CCHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RLLA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA