Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918538
Identifier: 229918538
GI number: 229918538
Start: 2788324
End: 2789454
Strand: Reverse
Name: 229918538
Synonym: EAT1b_2825
Alternate gene names: NA
Gene position: 2789454-2788324 (Counterclockwise)
Preceding gene: 229918575
Following gene: 229918532
Centisome position: 92.99
GC content: 53.67
Gene sequence:
>1131_bases ATGCAAAAGACGGCCATTATTGCAGAGTACAACCCGTTTCACAACGGGCACTATTATCAAGCGCAAACTGCACGTCACGA AACCGGAGCGGATGTCATGATTGCCATCATGAGTGCCCAGTTCACTCAACGGGGCGAACCCGCCTCGTTCGACAAGTGGA AACGGGCTAAGGCTGCCGTCGAGAGCGGTGCGATCGATCTAGTCATCGAGCTACCGACCCAGTACGGGGTCCAACGCGCC GACCGTTTCGCTAGCGCCTCCGTCTCGATTGCTGAACAGCTCCGTTGCCAGACGCTATCGTTCGGGAGTGAGAGCGGGGA CATCGATGCAATCCTACATGCAGCCCGTTCACATGTCGAAGAGACGCCACGTTATAAAGAGGCGCTAAAAAAAGCGCTAC AAGAAGGGCACTCGTCCGCGCAAGCTTCGAGTCGAGCTTTTCGCACCGTCTATCCCTCGTTTGATTTGACACGACCAAAC AACATTTTGGGCTACCATTACGCCAAAGCAGCAAAATCGATTCAGTTACATACAGTCAAACGGCTCGGGGCTGATTATCA TGACCCTTCATTAATGGATGTCATGTCGGCGACAGGCATTCGGGCTCATTACTTAGACATCGGTGAAGTTCGTGCCGTCC CGGCATCAACTGAAGCGATGTTTCGGACACGACCGATGACACATTGGGAACACTATTGGCCCGTCTTACAATTCAAACTG AGAACCTTGCCACTCCACACAATGATGGAGCTCGTAGGAATTGATGCCTCTCTCGCACCTCGTCTTAAGCAGGCGGGAGT CGAACCTTCATTTGAACGTGCCCTTGCCGCCGTGTCGACACGCCGCTACACGCGTACCGCCATTCAGCGGGCGTTCGTCG CCGTACTGCTTCACTGGTTAAAAGACGAGGCGCCGACACGCTTTGACGAAGTCCCTTACGTGAGACCGCTCGCCTTCAAC GATCTCGGAAGACTTGCGTTACGAGATGTGAAGGATGACGTGCCACTCGTCAGTAAGTTCGATGCCCGGCTCGATTTCGA AGCTCGTGTCACCGAAGCATATCGACTCCCACTTCAAGATGACGCGTTGATCGAGCACCGTCAACGCCCTCAGTTCATCT CTTCTAAATAA
Upstream 100 bases:
>100_bases ATGTTTTTTCTTTACACTAAAATCAGTTGACGACGGCGCTTTGCCAAAGCGTACTTACTCATCTTACACCAATCCATACG ACAATGCAAAGGAGTAAATC
Downstream 100 bases:
>100_bases CGAATCGCATCCTCGACCGTCTTGACAGGGACGACTTCAATGTCACTGTCGAGACGGTCTCGTGATTCCAGCGCCTCTTC ATAGTTCGAACCGGCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAIDLVIELPTQYGVQRA DRFASASVSIAEQLRCQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPSFDLTRPN NILGYHYAKAAKSIQLHTVKRLGADYHDPSLMDVMSATGIRAHYLDIGEVRAVPASTEAMFRTRPMTHWEHYWPVLQFKL RTLPLHTMMELVGIDASLAPRLKQAGVEPSFERALAAVSTRRYTRTAIQRAFVAVLLHWLKDEAPTRFDEVPYVRPLAFN DLGRLALRDVKDDVPLVSKFDARLDFEARVTEAYRLPLQDDALIEHRQRPQFISSK
Sequences:
>Translated_376_residues MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAIDLVIELPTQYGVQRA DRFASASVSIAEQLRCQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPSFDLTRPN NILGYHYAKAAKSIQLHTVKRLGADYHDPSLMDVMSATGIRAHYLDIGEVRAVPASTEAMFRTRPMTHWEHYWPVLQFKL RTLPLHTMMELVGIDASLAPRLKQAGVEPSFERALAAVSTRRYTRTAIQRAFVAVLLHWLKDEAPTRFDEVPYVRPLAFN DLGRLALRDVKDDVPLVSKFDARLDFEARVTEAYRLPLQDDALIEHRQRPQFISSK >Mature_376_residues MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAIDLVIELPTQYGVQRA DRFASASVSIAEQLRCQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPSFDLTRPN NILGYHYAKAAKSIQLHTVKRLGADYHDPSLMDVMSATGIRAHYLDIGEVRAVPASTEAMFRTRPMTHWEHYWPVLQFKL RTLPLHTMMELVGIDASLAPRLKQAGVEPSFERALAAVSTRRYTRTAIQRAFVAVLLHWLKDEAPTRFDEVPYVRPLAFN DLGRLALRDVKDDVPLVSKFDARLDFEARVTEAYRLPLQDDALIEHRQRPQFISSK
Specific function: Unknown
COG id: COG1323
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0348 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2825_EXISA (C4L5T3)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002887184.1 - GeneID: 7870712 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_2825 - OMA: MIAIMSA - ProtClustDB: CLSK2489582 - HAMAP: MF_01539 - InterPro: IPR014729 - InterPro: IPR008513 - Gene3D: G3DSA:3.40.50.620
Pfam domain/function: PF05636 DUF795
EC number: NA
Molecular weight: Translated: 42464; Mature: 42464
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAV CCCCEEEEECCCCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ESGAIDLVIELPTQYGVQRADRFASASVSIAEQLRCQTLSFGSESGDIDAILHAARSHVE HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ETPRYKEALKKALQEGHSSAQASSRAFRTVYPSFDLTRPNNILGYHYAKAAKSIQLHTVK CCHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RLGADYHDPSLMDVMSATGIRAHYLDIGEVRAVPASTEAMFRTRPMTHWEHYWPVLQFKL HHCCCCCCCHHHHHHHHCCCEEEEECCCHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH RTLPLHTMMELVGIDASLAPRLKQAGVEPSFERALAAVSTRRYTRTAIQRAFVAVLLHWL HHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDEAPTRFDEVPYVRPLAFNDLGRLALRDVKDDVPLVSKFDARLDFEARVTEAYRLPLQD HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCC DALIEHRQRPQFISSK CHHHHHHCCCCCCCCC >Mature Secondary Structure MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAV CCCCEEEEECCCCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ESGAIDLVIELPTQYGVQRADRFASASVSIAEQLRCQTLSFGSESGDIDAILHAARSHVE HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ETPRYKEALKKALQEGHSSAQASSRAFRTVYPSFDLTRPNNILGYHYAKAAKSIQLHTVK CCHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RLGADYHDPSLMDVMSATGIRAHYLDIGEVRAVPASTEAMFRTRPMTHWEHYWPVLQFKL HHCCCCCCCHHHHHHHHCCCEEEEECCCHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH RTLPLHTMMELVGIDASLAPRLKQAGVEPSFERALAAVSTRRYTRTAIQRAFVAVLLHWL HHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDEAPTRFDEVPYVRPLAFNDLGRLALRDVKDDVPLVSKFDARLDFEARVTEAYRLPLQD HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCC DALIEHRQRPQFISSK CHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA