Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918370
Identifier: 229918370
GI number: 229918370
Start: 2626208
End: 2627857
Strand: Reverse
Name: 229918370
Synonym: EAT1b_2655
Alternate gene names: NA
Gene position: 2627857-2626208 (Counterclockwise)
Preceding gene: 229918371
Following gene: 229918366
Centisome position: 87.6
GC content: 49.76
Gene sequence:
>1650_bases ATGCGAAAACGTGAAGACGGATATGTCCTCGTGCTTGTCCTCGTGACGATGGCAGCCCTCGCCGTTCTGTCACTTGCGGC CATGCAAGTCAACTTGGCGACGAATAAATTGACTGTCATCCGAACAGAAGATACACAGCTGAATGAAGATGCGAAAAGTG CACTTCGCCTCATCGCCGATGAGGTTCGGACCCAGTTCCCGCTCCATGGAGAAGCGGAAGTCCCGACACATATGGAGTCA GAAGCGGCATTTCAAACGGCAGTACAATCACTCCTTGTCAGTGACGAGCCGTTTACAGATTTGACGACAGACAGCGAGGT CCGCTATTCCATTGATTTGAAGAAAGATGCGATGGATACCACGATTCAAACAGCACCGTTCACGACGATTCTCCAAGTGA ACGTCACGGCATCGCGACAAGTGAACCCGGAACAACCGGAACTCACCGTTGAATACACGCAAGATTTGTACTTGACGGCT CTCCCGTCCTTTTTATACTACGTCCTCGGGTCCGACCAACAGTTGAATGTGAACGGGATGCCGACGATTCAAGGAAATAT CTATTCAGGTGGTCCCCTCGCTTTCATGCGTCAAGCGAACTTCCAATTGGATGGTGTGGCGAAGCAGATTGAAAATGTCG ATTCCAGTCGCCTTCACTTGAATGGCCGAATCGATTTAGTCGAATTGAGTGATTGCTTGAGTTGCCAGCAAGAGAACTAC TTCACGGTAGGTACGGAACAAGCTGGCGAGAAGGCGGACGCTGGGGTGTCCCCGAGTCGCTTTTCTCCATTCCAATACGA CTATTCAATCATCGAATTTTTAAATCGACGACTTGACACACCGCTCGCCTACACCAACAATGTCGACTCAAAAGTCTTTG GAGAAGGTCTGATTCGCTCGACCGATCAAGTATTCGAACTCGAGAGGGTTTTATCGGAAGATGGGACCTCGATTATCGAA CGCCCGACTTCGTACTTACGGGCGGATGCTTATAACGCACTCATCGACCCGACCATCGTGACATTACCGGATGCCATTTC CGATCGTGCCATGTACGTCACGGAATCCATCACCGAGTCGAATGCCCCGCTCCTTTTCGACGGGGACGTCGTCATTGAAT CCCTTGAGAAGCTGACGATTGCACGGCCCCTGATCGTACGTGGTGACTTGACCATTAAAGGGAACGTCTCCTTCAGTTCG ACGGTCTACACGCTCGGTGATACGTTCATTGACCGTGCCAATATTCTTCCGATTGATGCAGACAAAGGGAACTCGCTCAT CCTGTTATCTAAAGGAAAGATTCTGTTGAACCGAATCAACGAGTTTGACGACACACCGACGACGCTCCAGGCATTCATGT ATAGTGACTCGAACGAACCGACCTATGTGTATGCGGTCGGATCCATTCTCGAAGTCAACGGAGGTCTGTATAGTAAGGGA CCACTCGAAGTGAACGTCTTTAGAGGGGAATTTACTGGGGGCAACGGCTTAAGTCCAGCTGAGAACTTCGACCGTCAAGT TCCAGCTCACGAGGCCGAAAAGTCTCGATTGAAACTGACGTATAACGATTCCGTGTTCAATCAATTGGAAACACTCCCTG TCACGAATCAACTTCAATTCTTCGTCAGTCATCCCGTTCAATTGAAATGA
Upstream 100 bases:
>100_bases GGACTCATCGAAATCGAGATGGATTTGACTCAGTCGAACGATCCCGATTCCGTTACGACATTTGAAAGCTCCATCCCATT CTAAGAAAGGAGGCATCCTG
Downstream 100 bases:
>100_bases ATTCAAAAAATCGGCCTCCTCTCTGATTGAGAAGAAGCCGATTTTTTAGTTCCCCATCTTTAAAATGAGGTCCGAGTTGT AGTCTTTGGCCGTCTGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MRKREDGYVLVLVLVTMAALAVLSLAAMQVNLATNKLTVIRTEDTQLNEDAKSALRLIADEVRTQFPLHGEAEVPTHMES EAAFQTAVQSLLVSDEPFTDLTTDSEVRYSIDLKKDAMDTTIQTAPFTTILQVNVTASRQVNPEQPELTVEYTQDLYLTA LPSFLYYVLGSDQQLNVNGMPTIQGNIYSGGPLAFMRQANFQLDGVAKQIENVDSSRLHLNGRIDLVELSDCLSCQQENY FTVGTEQAGEKADAGVSPSRFSPFQYDYSIIEFLNRRLDTPLAYTNNVDSKVFGEGLIRSTDQVFELERVLSEDGTSIIE RPTSYLRADAYNALIDPTIVTLPDAISDRAMYVTESITESNAPLLFDGDVVIESLEKLTIARPLIVRGDLTIKGNVSFSS TVYTLGDTFIDRANILPIDADKGNSLILLSKGKILLNRINEFDDTPTTLQAFMYSDSNEPTYVYAVGSILEVNGGLYSKG PLEVNVFRGEFTGGNGLSPAENFDRQVPAHEAEKSRLKLTYNDSVFNQLETLPVTNQLQFFVSHPVQLK
Sequences:
>Translated_549_residues MRKREDGYVLVLVLVTMAALAVLSLAAMQVNLATNKLTVIRTEDTQLNEDAKSALRLIADEVRTQFPLHGEAEVPTHMES EAAFQTAVQSLLVSDEPFTDLTTDSEVRYSIDLKKDAMDTTIQTAPFTTILQVNVTASRQVNPEQPELTVEYTQDLYLTA LPSFLYYVLGSDQQLNVNGMPTIQGNIYSGGPLAFMRQANFQLDGVAKQIENVDSSRLHLNGRIDLVELSDCLSCQQENY FTVGTEQAGEKADAGVSPSRFSPFQYDYSIIEFLNRRLDTPLAYTNNVDSKVFGEGLIRSTDQVFELERVLSEDGTSIIE RPTSYLRADAYNALIDPTIVTLPDAISDRAMYVTESITESNAPLLFDGDVVIESLEKLTIARPLIVRGDLTIKGNVSFSS TVYTLGDTFIDRANILPIDADKGNSLILLSKGKILLNRINEFDDTPTTLQAFMYSDSNEPTYVYAVGSILEVNGGLYSKG PLEVNVFRGEFTGGNGLSPAENFDRQVPAHEAEKSRLKLTYNDSVFNQLETLPVTNQLQFFVSHPVQLK >Mature_549_residues MRKREDGYVLVLVLVTMAALAVLSLAAMQVNLATNKLTVIRTEDTQLNEDAKSALRLIADEVRTQFPLHGEAEVPTHMES EAAFQTAVQSLLVSDEPFTDLTTDSEVRYSIDLKKDAMDTTIQTAPFTTILQVNVTASRQVNPEQPELTVEYTQDLYLTA LPSFLYYVLGSDQQLNVNGMPTIQGNIYSGGPLAFMRQANFQLDGVAKQIENVDSSRLHLNGRIDLVELSDCLSCQQENY FTVGTEQAGEKADAGVSPSRFSPFQYDYSIIEFLNRRLDTPLAYTNNVDSKVFGEGLIRSTDQVFELERVLSEDGTSIIE RPTSYLRADAYNALIDPTIVTLPDAISDRAMYVTESITESNAPLLFDGDVVIESLEKLTIARPLIVRGDLTIKGNVSFSS TVYTLGDTFIDRANILPIDADKGNSLILLSKGKILLNRINEFDDTPTTLQAFMYSDSNEPTYVYAVGSILEVNGGLYSKG PLEVNVFRGEFTGGNGLSPAENFDRQVPAHEAEKSRLKLTYNDSVFNQLETLPVTNQLQFFVSHPVQLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60793; Mature: 60793
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKREDGYVLVLVLVTMAALAVLSLAAMQVNLATNKLTVIRTEDTQLNEDAKSALRLIAD CCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEECCCCCCHHHHHHHHHHHH EVRTQFPLHGEAEVPTHMESEAAFQTAVQSLLVSDEPFTDLTTDSEVRYSIDLKKDAMDT HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC TIQTAPFTTILQVNVTASRQVNPEQPELTVEYTQDLYLTALPSFLYYVLGSDQQLNVNGM EEECCCCEEEEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEECCCCC PTIQGNIYSGGPLAFMRQANFQLDGVAKQIENVDSSRLHLNGRIDLVELSDCLSCQQENY CEEECEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCEEEEECHHHHHHCCCCE FTVGTEQAGEKADAGVSPSRFSPFQYDYSIIEFLNRRLDTPLAYTNNVDSKVFGEGLIRS EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHCHHHCC TDQVFELERVLSEDGTSIIERPTSYLRADAYNALIDPTIVTLPDAISDRAMYVTESITES HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCC NAPLLFDGDVVIESLEKLTIARPLIVRGDLTIKGNVSFSSTVYTLGDTFIDRANILPIDA CCCEEEECHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCEEEECCHHHHCCCCEEEEEC DKGNSLILLSKGKILLNRINEFDDTPTTLQAFMYSDSNEPTYVYAVGSILEVNGGLYSKG CCCCEEEEEECCHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEEECEEEEECCCCCCCC PLEVNVFRGEFTGGNGLSPAENFDRQVPAHEAEKSRLKLTYNDSVFNQLETLPVTNQLQF CEEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCHHHHH FVSHPVQLK EECCCEECC >Mature Secondary Structure MRKREDGYVLVLVLVTMAALAVLSLAAMQVNLATNKLTVIRTEDTQLNEDAKSALRLIAD CCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEECCCCCCHHHHHHHHHHHH EVRTQFPLHGEAEVPTHMESEAAFQTAVQSLLVSDEPFTDLTTDSEVRYSIDLKKDAMDT HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC TIQTAPFTTILQVNVTASRQVNPEQPELTVEYTQDLYLTALPSFLYYVLGSDQQLNVNGM EEECCCCEEEEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEECCCCC PTIQGNIYSGGPLAFMRQANFQLDGVAKQIENVDSSRLHLNGRIDLVELSDCLSCQQENY CEEECEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCEEEEECHHHHHHCCCCE FTVGTEQAGEKADAGVSPSRFSPFQYDYSIIEFLNRRLDTPLAYTNNVDSKVFGEGLIRS EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHCHHHCC TDQVFELERVLSEDGTSIIERPTSYLRADAYNALIDPTIVTLPDAISDRAMYVTESITES HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCC NAPLLFDGDVVIESLEKLTIARPLIVRGDLTIKGNVSFSSTVYTLGDTFIDRANILPIDA CCCEEEECHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCEEEECCHHHHCCCCEEEEEC DKGNSLILLSKGKILLNRINEFDDTPTTLQAFMYSDSNEPTYVYAVGSILEVNGGLYSKG CCCCEEEEEECCHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEEECEEEEECCCCCCCC PLEVNVFRGEFTGGNGLSPAENFDRQVPAHEAEKSRLKLTYNDSVFNQLETLPVTNQLQF CEEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCHHHHH FVSHPVQLK EECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA