Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is yuxK [H]
Identifier: 229918138
GI number: 229918138
Start: 2368971
End: 2369366
Strand: Reverse
Name: yuxK [H]
Synonym: EAT1b_2418
Alternate gene names: 229918138
Gene position: 2369366-2368971 (Counterclockwise)
Preceding gene: 229918139
Following gene: 229918133
Centisome position: 78.98
GC content: 48.99
Gene sequence:
>396_bases TTGCCTGCGATTGTTTTATTTGATGGCGATTGCAACTTCTGTGATGCCAGTGTCCAGTTCATCATTCGTCATGATCGACA CGCCTCGATTCACTTTGCTTCGCTCCAAAGCGAGGTCGGTCAGTCGCTCCGAACACGACACCGGATCCCGGAATCAGTCG ACAGCATCGTCTATATTGAGGAAGGGGTTCCTTACTTAAAATCAGACGCTGCGATTCGAATTGCCGAACACCTTGATGGC CGTTGGCGCCTGCTTCGACTCATTCGTTTCATACCTAGACCGATTCGTGATCATGGATATGCGTTATTCGCCAAACATCG GACACGTCTATTTGGGAAAAAGGAAGTGTGCACACTCCCTTCCCCGGATGTTCGTAAACGATTTTTAGACCGCTAA
Upstream 100 bases:
>100_bases ATGTATCGCTCTATAAGATGCAACCTGCTCGCCAACTCGCTGCTTGACGTTTAACATGAAGACAAAACGGTAAAACAGTA CGATGAAGGAGGCGAACTAC
Downstream 100 bases:
>100_bases AAAAGTCGAGCCATTAATGGACTCGACTTTTTTATTATTCGACTACGGCTAAATCTTGAATCATATACAGGTCGTAATAC GCCCCGCGACGACGCATCAA
Product: thiol-disulphide oxidoreductase DCC
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MPAIVLFDGDCNFCDASVQFIIRHDRHASIHFASLQSEVGQSLRTRHRIPESVDSIVYIEEGVPYLKSDAAIRIAEHLDG RWRLLRLIRFIPRPIRDHGYALFAKHRTRLFGKKEVCTLPSPDVRKRFLDR
Sequences:
>Translated_131_residues MPAIVLFDGDCNFCDASVQFIIRHDRHASIHFASLQSEVGQSLRTRHRIPESVDSIVYIEEGVPYLKSDAAIRIAEHLDG RWRLLRLIRFIPRPIRDHGYALFAKHRTRLFGKKEVCTLPSPDVRKRFLDR >Mature_130_residues PAIVLFDGDCNFCDASVQFIIRHDRHASIHFASLQSEVGQSLRTRHRIPESVDSIVYIEEGVPYLKSDAAIRIAEHLDGR WRLLRLIRFIPRPIRDHGYALFAKHRTRLFGKKEVCTLPSPDVRKRFLDR
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 15250; Mature: 15119
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIVLFDGDCNFCDASVQFIIRHDRHASIHFASLQSEVGQSLRTRHRIPESVDSIVYIE CCEEEEECCCCCCCCHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHCEEEEC EGVPYLKSDAAIRIAEHLDGRWRLLRLIRFIPRPIRDHGYALFAKHRTRLFGKKEVCTLP CCCCCCCCCCEEHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCCCCCC SPDVRKRFLDR CCHHHHHHCCC >Mature Secondary Structure PAIVLFDGDCNFCDASVQFIIRHDRHASIHFASLQSEVGQSLRTRHRIPESVDSIVYIE CEEEEECCCCCCCCHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHCEEEEC EGVPYLKSDAAIRIAEHLDGRWRLLRLIRFIPRPIRDHGYALFAKHRTRLFGKKEVCTLP CCCCCCCCCCEEHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCCCCCC SPDVRKRFLDR CCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]