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The map label for this gene is yfkA [H]

Identifier: 229918106

GI number: 229918106

Start: 2338357

End: 2339463

Strand: Reverse

Name: yfkA [H]

Synonym: EAT1b_2386

Alternate gene names: 229918106

Gene position: 2339463-2338357 (Counterclockwise)

Preceding gene: 229918110

Following gene: 229918105

Centisome position: 77.98

GC content: 49.14

Gene sequence:

>1107_bases
ATGCAAAACATCTCCCCAACTTTCGACCCTTGGGAAGCCTATCTCGACCAAGTCGAACACGGTCGACTCGTCTTATCCAA
CGTCGAAGTCACTACAACAAAGCTGTGTAACATGCGCTGCGAACATTGTGCGGTCGGTTATATGCTCGACCAAACGGAAG
AACCAGAAGTTCCGCTCGACCTGTTGATTCAACGACTGGATGAGATCGAACATTTGCGTGCCTTCTCCATCACAGGCGGT
GAACCGATGCTGTCCATGAAATCGGTCCGCAACTATGTCGTTCCATTGTTACGTTATGCGAAAGAACGTGGGGCCCGTAC
GCAAATCAACTCGAATTTGACGCTACCGTTATCTCGCTATCATCTTATTACCCCTTACTTGGACGTTTTGCACATTTCGC
ATAACTGGGGCACCGATGCCGATTTCCTTGAAGGCGGATTCGCGATGATGGACCGGAAACCGAGTGAAGAGGCCCGATTG
AAAATGCTCCAGACGATGAAAGACAACGCACGTGCTCTCACATCTGAAGGAATCATTGTATCCGCGGAGACGATGATCAA
CAAGCGGACGATTCCTCATTTGAAAGAAATCCATGAAGAAATTGTCTCACTTGGTTGCCAAAGACATGAGGTTCACCCAA
TGTACCCCGCAGACTTTGCTAGCGCTCTCGAATCGGCATCGCTCGCTGATACTCGACAGGCCATCCATGACTTACTCGAT
GTCCGTGACGAGAACGTATGGATGTTGTTCGGGACGTTGCCATTCTATGCCTGTTCTGACCTACCTGAAGATCGTGCCCT
GTTGAAGCGACTTCATGAAACAAAAAACGTGACCGTTCGAAACGACCCGGATGGCCGTTCCCGTCTCAACACGAATATCT
TTGACGGACAGATTATCGTAACCGATTTCGGTGATGAACTCGGTTCCCTTGGCACCGTCTATGACACATCATTCCAAGAA
GCGTATGATACGTGGACGAACAGCCAATTGAACGCTACACTCTCTTGTCACTGCCCTGCCGTGAAATGTCTCGGTCCGAA
CGCACTCGTCAAACAAGCCTATTATCCGACGGTCGATTTTCAATCTCGAAAAGCTACATCGTTTTAA

Upstream 100 bases:

>100_bases
TCGTGATTTACCCATCTTGTAATCGCTCCTTTGGTTCGTGACAAAGAGTTGCTATTATAGCATACTATTTCGTGTAACTT
GATGAAAAGGTGGAATCCAC

Downstream 100 bases:

>100_bases
ATATTTCGATTCGGGAAATGTTCTGTATATTAAACGAATCGAGGTGCGTGTAGATGACTGCGATTTATATCCTCATGATC
ACCGTGATGGCCATCATTAT

Product: YfkB-like domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MQNISPTFDPWEAYLDQVEHGRLVLSNVEVTTTKLCNMRCEHCAVGYMLDQTEEPEVPLDLLIQRLDEIEHLRAFSITGG
EPMLSMKSVRNYVVPLLRYAKERGARTQINSNLTLPLSRYHLITPYLDVLHISHNWGTDADFLEGGFAMMDRKPSEEARL
KMLQTMKDNARALTSEGIIVSAETMINKRTIPHLKEIHEEIVSLGCQRHEVHPMYPADFASALESASLADTRQAIHDLLD
VRDENVWMLFGTLPFYACSDLPEDRALLKRLHETKNVTVRNDPDGRSRLNTNIFDGQIIVTDFGDELGSLGTVYDTSFQE
AYDTWTNSQLNATLSCHCPAVKCLGPNALVKQAYYPTVDFQSRKATSF

Sequences:

>Translated_368_residues
MQNISPTFDPWEAYLDQVEHGRLVLSNVEVTTTKLCNMRCEHCAVGYMLDQTEEPEVPLDLLIQRLDEIEHLRAFSITGG
EPMLSMKSVRNYVVPLLRYAKERGARTQINSNLTLPLSRYHLITPYLDVLHISHNWGTDADFLEGGFAMMDRKPSEEARL
KMLQTMKDNARALTSEGIIVSAETMINKRTIPHLKEIHEEIVSLGCQRHEVHPMYPADFASALESASLADTRQAIHDLLD
VRDENVWMLFGTLPFYACSDLPEDRALLKRLHETKNVTVRNDPDGRSRLNTNIFDGQIIVTDFGDELGSLGTVYDTSFQE
AYDTWTNSQLNATLSCHCPAVKCLGPNALVKQAYYPTVDFQSRKATSF
>Mature_368_residues
MQNISPTFDPWEAYLDQVEHGRLVLSNVEVTTTKLCNMRCEHCAVGYMLDQTEEPEVPLDLLIQRLDEIEHLRAFSITGG
EPMLSMKSVRNYVVPLLRYAKERGARTQINSNLTLPLSRYHLITPYLDVLHISHNWGTDADFLEGGFAMMDRKPSEEARL
KMLQTMKDNARALTSEGIIVSAETMINKRTIPHLKEIHEEIVSLGCQRHEVHPMYPADFASALESASLADTRQAIHDLLD
VRDENVWMLFGTLPFYACSDLPEDRALLKRLHETKNVTVRNDPDGRSRLNTNIFDGQIIVTDFGDELGSLGTVYDTSFQE
AYDTWTNSQLNATLSCHCPAVKCLGPNALVKQAYYPTVDFQSRKATSF

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197
- InterPro:   IPR014866 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08756 YfkB [H]

EC number: NA

Molecular weight: Translated: 41697; Mature: 41697

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNISPTFDPWEAYLDQVEHGRLVLSNVEVTTTKLCNMRCEHCAVGYMLDQTEEPEVPLD
CCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LLIQRLDEIEHLRAFSITGGEPMLSMKSVRNYVVPLLRYAKERGARTQINSNLTLPLSRY
HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHH
HLITPYLDVLHISHNWGTDADFLEGGFAMMDRKPSEEARLKMLQTMKDNARALTSEGIIV
EEHHHHHHHEEEECCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCEEE
SAETMINKRTIPHLKEIHEEIVSLGCQRHEVHPMYPADFASALESASLADTRQAIHDLLD
EHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VRDENVWMLFGTLPFYACSDLPEDRALLKRLHETKNVTVRNDPDGRSRLNTNIFDGQIIV
CCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCHHHCCCCEECCEEEE
TDFGDELGSLGTVYDTSFQEAYDTWTNSQLNATLSCHCPAVKCLGPNALVKQAYYPTVDF
EECCHHHCCCCCHHCCHHHHHHHHCCCCCCCEEEEECCCEEEECCCHHHHHHHCCCCCCC
QSRKATSF
CCCCCCCC
>Mature Secondary Structure
MQNISPTFDPWEAYLDQVEHGRLVLSNVEVTTTKLCNMRCEHCAVGYMLDQTEEPEVPLD
CCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LLIQRLDEIEHLRAFSITGGEPMLSMKSVRNYVVPLLRYAKERGARTQINSNLTLPLSRY
HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHH
HLITPYLDVLHISHNWGTDADFLEGGFAMMDRKPSEEARLKMLQTMKDNARALTSEGIIV
EEHHHHHHHEEEECCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCEEE
SAETMINKRTIPHLKEIHEEIVSLGCQRHEVHPMYPADFASALESASLADTRQAIHDLLD
EHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VRDENVWMLFGTLPFYACSDLPEDRALLKRLHETKNVTVRNDPDGRSRLNTNIFDGQIIV
CCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCHHHCCCCEECCEEEE
TDFGDELGSLGTVYDTSFQEAYDTWTNSQLNATLSCHCPAVKCLGPNALVKQAYYPTVDF
EECCHHHCCCCCHHCCHHHHHHHHCCCCCCCEEEEECCCEEEECCCHHHHHHHCCCCCCC
QSRKATSF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]