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The map label for this gene is yfkH [H]

Identifier: 229918098

GI number: 229918098

Start: 2330830

End: 2331783

Strand: Reverse

Name: yfkH [H]

Synonym: EAT1b_2378

Alternate gene names: 229918098

Gene position: 2331783-2330830 (Counterclockwise)

Preceding gene: 229918099

Following gene: 229918095

Centisome position: 77.73

GC content: 44.34

Gene sequence:

>954_bases
ATGGCAATGACAGAAGTGAAGGAAAAAAAGAATTGGCTTTCATTTGGGAAAGAGTTATTTCGACGATTTCAAGAGCATGA
TGTTCAAGACTACGGGGCTACCCTCGCATTCTTTTGGTTTTTATCCATTTTTCCTGGAATCATCTTTATTTTGGCGCTCT
TGTCCTTTTTTGATGTCTCACAAGATTCGTTTCAAAATCAATTGAACGATTTGGCACCCGGGTCCGCTGCTTCCGGGTTT
TTAACGGGAATTTTCGAGGCGATTGGCGAACCACGAGGCGGTCTCTTGTCACTCGGTGCGATTTTGGCCATTTGGTCCGC
CGCAAAAGGGGTAGACCGTCTGATCACGACGTCACTTCATGCTTATGGTGAAGACAATGAACGTAACTTTTTCGTCAAAA
AAGGATTGGCACTCGGATTGACGATTCTGCTTGGGATCGGGATGCTACTGCTGATTCTCTCGAACGTGTTCGGGTCTCAA
ATCATTTCATTCGTCACTGAGTATTTACCCGTCAACATTACCGGAGCCGAAGAAATGATGATCAACGTGTTCCGATATGT
CCTTACGACGGTTGTCCTCATTTTGACGCTTTCGATTTTTTATAAAGTATCTCCACAACAGCACGTCTTTTGGAAAAGTA
CCATCCCTGGTGCCATCTTCGGTGTCATCGGTTGGCAAATCGTCTCATTCGGTTTCAGCCTATACGTTTCAAACTTCGGA
AGTTATGACTCGACTTACGGGTCACTCGGAGGAATCATCGTCACGTTGCTCTGGTTACAATTAACCGGGATGATCATTTT
AATCGGATCTGAAATCAACGCGACATGGATGCGTTTCTTTAAGACACCGAGCGAGCAGGAATACGAACGCGACTTCAAAA
AGAACAAAAAGAAAGCGAAACAAAAGCAAGAAGAAGATAACTATGACGACATCCCGACGAATACGTACGGATAA

Upstream 100 bases:

>100_bases
GAACGTTTTTACGATTTGACCTTATCGGAGGAGTAATCAGGTGTACACCCTGCCGAATTCGGGAAACGTTTTTTAACGAT
CGAGTCAGGAGGGTTTTATT

Downstream 100 bases:

>100_bases
CCCAAAAGGAGCACGTTCAAGCTGAACGCGCTCCTTTCTTATGCTTCGATCGGATCAAGACGTCCCGTCGCCGGGTCGAT
CACGAATCCGTGTACATTTG

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MAMTEVKEKKNWLSFGKELFRRFQEHDVQDYGATLAFFWFLSIFPGIIFILALLSFFDVSQDSFQNQLNDLAPGSAASGF
LTGIFEAIGEPRGGLLSLGAILAIWSAAKGVDRLITTSLHAYGEDNERNFFVKKGLALGLTILLGIGMLLLILSNVFGSQ
IISFVTEYLPVNITGAEEMMINVFRYVLTTVVLILTLSIFYKVSPQQHVFWKSTIPGAIFGVIGWQIVSFGFSLYVSNFG
SYDSTYGSLGGIIVTLLWLQLTGMIILIGSEINATWMRFFKTPSEQEYERDFKKNKKKAKQKQEEDNYDDIPTNTYG

Sequences:

>Translated_317_residues
MAMTEVKEKKNWLSFGKELFRRFQEHDVQDYGATLAFFWFLSIFPGIIFILALLSFFDVSQDSFQNQLNDLAPGSAASGF
LTGIFEAIGEPRGGLLSLGAILAIWSAAKGVDRLITTSLHAYGEDNERNFFVKKGLALGLTILLGIGMLLLILSNVFGSQ
IISFVTEYLPVNITGAEEMMINVFRYVLTTVVLILTLSIFYKVSPQQHVFWKSTIPGAIFGVIGWQIVSFGFSLYVSNFG
SYDSTYGSLGGIIVTLLWLQLTGMIILIGSEINATWMRFFKTPSEQEYERDFKKNKKKAKQKQEEDNYDDIPTNTYG
>Mature_316_residues
AMTEVKEKKNWLSFGKELFRRFQEHDVQDYGATLAFFWFLSIFPGIIFILALLSFFDVSQDSFQNQLNDLAPGSAASGFL
TGIFEAIGEPRGGLLSLGAILAIWSAAKGVDRLITTSLHAYGEDNERNFFVKKGLALGLTILLGIGMLLLILSNVFGSQI
ISFVTEYLPVNITGAEEMMINVFRYVLTTVVLILTLSIFYKVSPQQHVFWKSTIPGAIFGVIGWQIVSFGFSLYVSNFGS
YDSTYGSLGGIIVTLLWLQLTGMIILIGSEINATWMRFFKTPSEQEYERDFKKNKKKAKQKQEEDNYDDIPTNTYG

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 35549; Mature: 35417

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMTEVKEKKNWLSFGKELFRRFQEHDVQDYGATLAFFWFLSIFPGIIFILALLSFFDVS
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDSFQNQLNDLAPGSAASGFLTGIFEAIGEPRGGLLSLGAILAIWSAAKGVDRLITTSLH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGEDNERNFFVKKGLALGLTILLGIGMLLLILSNVFGSQIISFVTEYLPVNITGAEEMM
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
INVFRYVLTTVVLILTLSIFYKVSPQQHVFWKSTIPGAIFGVIGWQIVSFGFSLYVSNFG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SYDSTYGSLGGIIVTLLWLQLTGMIILIGSEINATWMRFFKTPSEQEYERDFKKNKKKAK
CCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
QKQEEDNYDDIPTNTYG
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AMTEVKEKKNWLSFGKELFRRFQEHDVQDYGATLAFFWFLSIFPGIIFILALLSFFDVS
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDSFQNQLNDLAPGSAASGFLTGIFEAIGEPRGGLLSLGAILAIWSAAKGVDRLITTSLH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGEDNERNFFVKKGLALGLTILLGIGMLLLILSNVFGSQIISFVTEYLPVNITGAEEMM
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
INVFRYVLTTVVLILTLSIFYKVSPQQHVFWKSTIPGAIFGVIGWQIVSFGFSLYVSNFG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SYDSTYGSLGGIIVTLLWLQLTGMIILIGSEINATWMRFFKTPSEQEYERDFKKNKKKAK
CCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
QKQEEDNYDDIPTNTYG
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]