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The map label for this gene is vanW [H]

Identifier: 229917941

GI number: 229917941

Start: 2158228

End: 2159070

Strand: Reverse

Name: vanW [H]

Synonym: EAT1b_2220

Alternate gene names: 229917941

Gene position: 2159070-2158228 (Counterclockwise)

Preceding gene: 229917943

Following gene: 229917934

Centisome position: 71.97

GC content: 44.01

Gene sequence:

>843_bases
ATGATGCAATCTGATCTACAGCGTCCTAAGAAACGTTCACCGCTCAGAATATGGTCCGGTACCCAAGTATATACGTTAAA
AAGACGACTTGAATGGATGACGGATAAACGAAAATATGTTTCAAAACGAAATCCTGACCCGATGCCATATCTGATCCATA
CACACCGCACTCCTCTATATCGCCAACTCCGAGATGTCGATATGGAAGTTCAACATAACAAGGTTACCAATCTGAAGATT
GCAATCGCCAAACTGAACGGCTCTATCCTGACTCCAAACGACGTCCTCTCCTATTGGAAGATGATCGGCAAGCCGACGAA
ACGTAAAGGATACGTCGACGGAATGATTCTTCATTACGGAAAAGTCACTTCAGGAATCGGTGGTGGTCTATGCCAGCTGT
CCAATCTAATCTATTGGATCACCTTACATAGCCCATTGACCGTGACCGAACGTTATCGTCACAGCTACGATGTGTTCCCA
GATTACCGACGAGACCAACCTTTCGGAAGTGGCGCGACATGTTCTTATAATTATCTCGACTTACAAATCACAAACCAGAC
GGCACAAACGTATCAACTCCTTCTATATATAGAGGGAGATCATCTCGTCGGGGAATGGCGCTCGAACATCCCGAATAAAG
AACAGTATCGTATATATGAAGAAAACCATCATTTCACCCGGGAATGGTGGGGTGGAACGATCCGACATAACCAGATATTT
AGAGAAGTCACTTCAATGAATGGTATACATCTTCGAAACGAGTTCATCACAGAAAATCACGCGATCACGATGTACGATCC
ATTCCTTCCTGAAAATACTGCATACAAAAAAGCCGACTCGTAA

Upstream 100 bases:

>100_bases
TCATCCGAAGTTCGAATCCCAACTCCTTGAAGGAAGAATAACTCACTCTAAAGAATACAGCAATATCTAATAACGACTAT
AAACCTTTAAGGAGCCCTTC

Downstream 100 bases:

>100_bases
TAATAGAGCCGGCTTTTCAAATGAACTTATGCGTGTGGCAAGAACATGAAGTATGCCAAGAAGATGACCAACATCCCATA
CATGATCGGATGAATCTCTT

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MMQSDLQRPKKRSPLRIWSGTQVYTLKRRLEWMTDKRKYVSKRNPDPMPYLIHTHRTPLYRQLRDVDMEVQHNKVTNLKI
AIAKLNGSILTPNDVLSYWKMIGKPTKRKGYVDGMILHYGKVTSGIGGGLCQLSNLIYWITLHSPLTVTERYRHSYDVFP
DYRRDQPFGSGATCSYNYLDLQITNQTAQTYQLLLYIEGDHLVGEWRSNIPNKEQYRIYEENHHFTREWWGGTIRHNQIF
REVTSMNGIHLRNEFITENHAITMYDPFLPENTAYKKADS

Sequences:

>Translated_280_residues
MMQSDLQRPKKRSPLRIWSGTQVYTLKRRLEWMTDKRKYVSKRNPDPMPYLIHTHRTPLYRQLRDVDMEVQHNKVTNLKI
AIAKLNGSILTPNDVLSYWKMIGKPTKRKGYVDGMILHYGKVTSGIGGGLCQLSNLIYWITLHSPLTVTERYRHSYDVFP
DYRRDQPFGSGATCSYNYLDLQITNQTAQTYQLLLYIEGDHLVGEWRSNIPNKEQYRIYEENHHFTREWWGGTIRHNQIF
REVTSMNGIHLRNEFITENHAITMYDPFLPENTAYKKADS
>Mature_280_residues
MMQSDLQRPKKRSPLRIWSGTQVYTLKRRLEWMTDKRKYVSKRNPDPMPYLIHTHRTPLYRQLRDVDMEVQHNKVTNLKI
AIAKLNGSILTPNDVLSYWKMIGKPTKRKGYVDGMILHYGKVTSGIGGGLCQLSNLIYWITLHSPLTVTERYRHSYDVFP
DYRRDQPFGSGATCSYNYLDLQITNQTAQTYQLLLYIEGDHLVGEWRSNIPNKEQYRIYEENHHFTREWWGGTIRHNQIF
REVTSMNGIHLRNEFITENHAITMYDPFLPENTAYKKADS

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007391 [H]

Pfam domain/function: PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 33104; Mature: 33104

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQSDLQRPKKRSPLRIWSGTQVYTLKRRLEWMTDKRKYVSKRNPDPMPYLIHTHRTPLY
CCCHHHCCHHHCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHH
RQLRDVDMEVQHNKVTNLKIAIAKLNGSILTPNDVLSYWKMIGKPTKRKGYVDGMILHYG
HHHHHCCCEECCCEECEEEEEEEEECCCEECHHHHHHHHHHHCCCCCCCCCCCCEEEECC
KVTSGIGGGLCQLSNLIYWITLHSPLTVTERYRHSYDVFPDYRRDQPFGSGATCSYNYLD
CHHCCCCCHHHHHCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEE
LQITNQTAQTYQLLLYIEGDHLVGEWRSNIPNKEQYRIYEENHHFTREWWGGTIRHNQIF
EEEECCCCCEEEEEEEEECCEEEEHHHHCCCCCHHEEEEECCCCEEHHHCCCCCHHHHHH
REVTSMNGIHLRNEFITENHAITMYDPFLPENTAYKKADS
HHHHHCCCEEEEHHHCCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MMQSDLQRPKKRSPLRIWSGTQVYTLKRRLEWMTDKRKYVSKRNPDPMPYLIHTHRTPLY
CCCHHHCCHHHCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHH
RQLRDVDMEVQHNKVTNLKIAIAKLNGSILTPNDVLSYWKMIGKPTKRKGYVDGMILHYG
HHHHHCCCEECCCEECEEEEEEEEECCCEECHHHHHHHHHHHCCCCCCCCCCCCEEEECC
KVTSGIGGGLCQLSNLIYWITLHSPLTVTERYRHSYDVFPDYRRDQPFGSGATCSYNYLD
CHHCCCCCHHHHHCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEE
LQITNQTAQTYQLLLYIEGDHLVGEWRSNIPNKEQYRIYEENHHFTREWWGGTIRHNQIF
EEEECCCCCEEEEEEEEECCEEEEHHHHCCCCCHHEEEEECCCCEEHHHCCCCCHHHHHH
REVTSMNGIHLRNEFITENHAITMYDPFLPENTAYKKADS
HHHHHCCCEEEEHHHCCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631706; 12663927 [H]