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The map label for this gene is ybaF [H]

Identifier: 229917822

GI number: 229917822

Start: 2052446

End: 2053270

Strand: Reverse

Name: ybaF [H]

Synonym: EAT1b_2100

Alternate gene names: 229917822

Gene position: 2053270-2052446 (Counterclockwise)

Preceding gene: 229917823

Following gene: 229917818

Centisome position: 68.44

GC content: 49.33

Gene sequence:

>825_bases
ATGGCAGTAGAAATGCTCGGCTATATCGATAAACCGTCTCCCGTCCACCGCTTGACGGGGACGACTAAATTAATTGGCTT
CATCTTGTTCACGACCGCCACAATGTTCACGTATGACACGCGCGTCCTACTCGTCTTAGGTCTTTTCAGTATCGGACTCT
TCTCGATATCACAAATCCGATTCAAAGAAGTTCGGTTCGTTCTTGTCTTCACCGCCATCTTTGTCTTACTGAATGCACTT
GCCGTCTATTTGTTTGAACCGGAACAAGGTGTCGTCATCTACGGGACGCGCCATCTATTGTTCGAGGGGATTGGGCGCTT
CACCCTCACAGCAGAGCAAGCGTTCTATATGTTCAATCTCATTTTAAAATATAGTGTGATTGTCCCGATCGCCGTGTTGT
TTCTCGTCACAACGCATCCGACCGAATTTGCGTCTTCCTTGAATCGAATCGGTGTGCCATATAAAGTCGCATTCGCCGTC
TCGCTTGCGCTACGTTACATCCCTGATGTTCAGCAAGATTTCCGTACTATCGCGGACGCACAAGCAGCCCGTGGTGTCGC
TGTAACACAAGGACCACTCTGGAAACGGGCCCGACACAGTCTGCAAATCTTGATTCCGCTTCTCTTCACGAGTCTTGAAC
GGATTGAGACGGTCAGTAACGCCATGGATTTACGCGGGTTCGGCGCCGACAAAAAACGGACGTGGTACAATCAACGCGCG
ATGACCCGCATCGACTATATCGCCATCGGCATCGCCCTCTCGTTGACAGTATTCTCGTTTATCGTGACCTTCTATGATGG
GAGTCGTTTCTATAATCCGTTTTAA

Upstream 100 bases:

>100_bases
TAAAACAAACGTCTCTGTTCACAGTCGCGCGACATCTCGATATGGATGTCAAACCGCTCTTGTCGGCCGTGATCAGAGCA
GAACGAAAGGATCGGAAACA

Downstream 100 bases:

>100_bases
GTACACAAGCAAAACAGGCACCTAGCTCCCCCATGTGACAACGGGAACTAAGTGCCTGTTTTATTTTTCATTCATCTGTT
TCATTAAATCCATCTGTTCT

Product: cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MAVEMLGYIDKPSPVHRLTGTTKLIGFILFTTATMFTYDTRVLLVLGLFSIGLFSISQIRFKEVRFVLVFTAIFVLLNAL
AVYLFEPEQGVVIYGTRHLLFEGIGRFTLTAEQAFYMFNLILKYSVIVPIAVLFLVTTHPTEFASSLNRIGVPYKVAFAV
SLALRYIPDVQQDFRTIADAQAARGVAVTQGPLWKRARHSLQILIPLLFTSLERIETVSNAMDLRGFGADKKRTWYNQRA
MTRIDYIAIGIALSLTVFSFIVTFYDGSRFYNPF

Sequences:

>Translated_274_residues
MAVEMLGYIDKPSPVHRLTGTTKLIGFILFTTATMFTYDTRVLLVLGLFSIGLFSISQIRFKEVRFVLVFTAIFVLLNAL
AVYLFEPEQGVVIYGTRHLLFEGIGRFTLTAEQAFYMFNLILKYSVIVPIAVLFLVTTHPTEFASSLNRIGVPYKVAFAV
SLALRYIPDVQQDFRTIADAQAARGVAVTQGPLWKRARHSLQILIPLLFTSLERIETVSNAMDLRGFGADKKRTWYNQRA
MTRIDYIAIGIALSLTVFSFIVTFYDGSRFYNPF
>Mature_273_residues
AVEMLGYIDKPSPVHRLTGTTKLIGFILFTTATMFTYDTRVLLVLGLFSIGLFSISQIRFKEVRFVLVFTAIFVLLNALA
VYLFEPEQGVVIYGTRHLLFEGIGRFTLTAEQAFYMFNLILKYSVIVPIAVLFLVTTHPTEFASSLNRIGVPYKVAFAVS
LALRYIPDVQQDFRTIADAQAARGVAVTQGPLWKRARHSLQILIPLLFTSLERIETVSNAMDLRGFGADKKRTWYNQRAM
TRIDYIAIGIALSLTVFSFIVTFYDGSRFYNPF

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 31016; Mature: 30885

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVEMLGYIDKPSPVHRLTGTTKLIGFILFTTATMFTYDTRVLLVLGLFSIGLFSISQIR
CCEEHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKEVRFVLVFTAIFVLLNALAVYLFEPEQGVVIYGTRHLLFEGIGRFTLTAEQAFYMFNL
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHCCCCEEEHHHHHHHHHHH
ILKYSVIVPIAVLFLVTTHPTEFASSLNRIGVPYKVAFAVSLALRYIPDVQQDFRTIADA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
QAARGVAVTQGPLWKRARHSLQILIPLLFTSLERIETVSNAMDLRGFGADKKRTWYNQRA
HHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
MTRIDYIAIGIALSLTVFSFIVTFYDGSRFYNPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AVEMLGYIDKPSPVHRLTGTTKLIGFILFTTATMFTYDTRVLLVLGLFSIGLFSISQIR
CEEHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKEVRFVLVFTAIFVLLNALAVYLFEPEQGVVIYGTRHLLFEGIGRFTLTAEQAFYMFNL
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHCCCCEEEHHHHHHHHHHH
ILKYSVIVPIAVLFLVTTHPTEFASSLNRIGVPYKVAFAVSLALRYIPDVQQDFRTIADA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
QAARGVAVTQGPLWKRARHSLQILIPLLFTSLERIETVSNAMDLRGFGADKKRTWYNQRA
HHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
MTRIDYIAIGIALSLTVFSFIVTFYDGSRFYNPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]