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The map label for this gene is ydiF [H]

Identifier: 229917818

GI number: 229917818

Start: 2048667

End: 2050568

Strand: Reverse

Name: ydiF [H]

Synonym: EAT1b_2096

Alternate gene names: 229917818

Gene position: 2050568-2048667 (Counterclockwise)

Preceding gene: 229917822

Following gene: 229917817

Centisome position: 68.35

GC content: 55.47

Gene sequence:

>1902_bases
TTGATCCTACTGCAAGTCAATAACTTATCCAAATCCTTCGGCGTCGAGCCGATTTTAGAAAACGTCAAACTCGAAATCCA
GGAAGGCGAACGCGTCGCCCTTGTCGGTCGTAACGGGGCCGGGAAGTCGACGCTTTTGAAAGTCATCGCTGGTGAATACA
ACTATGACTCCGGGGACATCATGAAGCCAAAAGACGTCACGATCGGCTATCTCGCCCAAGACTCAGGGTTAGAATCCGAC
GAGACGATCTGGAATGAGATGCTCACCGTCTTCACGGACTTGATCGAGCAAGAGAAGACGCTCCGTCGCATGGAGGCTGA
CATGGGCTCCGAACGAATCCTAAATGACGCCGCTGCATACGAACGCCTCCTCTCCTCTTATGATGAAGAGCAACATACGT
TCAAAGAGCGTGGCGGTTACCAATATGAAGCGACGATCCGCTCAGTCCTTCACGGGATGCGCTTCTATCCGGACGACTTC
GAGCGTCGAATCGACACACTCTCCGGGGGACAACGGACACGTCTCGCCTTGGCGAAGATGCTCCTTCAAAGTCCCGACCT
GCTCATCTTGGACGAGCCGACGAACCATTTGGACATCGAGACGCTCGCCTGGCTAGAGAAGTACTTGAGCGGCTATAAAG
GTGCCGTCCTCATCGTCTCCCACGACCGCTACTTCCTCGACCGCGTCGTTTCGGTCGTCTATGAGTTGTCACGTCATCGG
AGCCGCCGCTTCGTCGGGAACTATACGAAGTATCTCGAGCAGAAGGCGGCCCTCTACGAACAAGAGAAGAAGCAGTTCGA
GTCACAGCAAGAAGAGATCGCTAAGATGCAGGACTTCATTCAGCGAAACATCGCCCGGGCGACGACGACGAAACGGGCAC
AAAGCGTGCGGAAACGTCTGGAGAAAGTCGACCGACTCGATGCTCCAGATGGCGACGAGCGCAGCGCCGTCCTCTCCTTC
TCCATCAAACGCCAGAGCGGGAACGATGTGTTGAGCGCGAGTGACCTCGCCATCGGGTACGAGGAAGCGATTGCTCAAAA
CCTCCGCTTCCAGCTTCAGCGCGGGGAATCCGTCGCTCTCGTCGGTCCGAACGGGGTCGGGAAGTCGACCCTCCTCAAAG
TGTTGACGAAACAACAAGCTGCCCTCACCGGTGACATCCGTTACGGGACGGGGGTCGAAATCGGCTACTACGACCAGGAG
CAACAAAACTTGTCTGACGCGAACCGTGTCATCGACGAGATTTGGAACGACTGGCCGCTCATGCGCGAGCAAGAAGTACG
GAGTCTTCTCGGACAGTTCCTCTTCAGTGGCGATGACGTCATGAAGCGTGTCCATGAACTATCCGGTGGCGAACGGGCAC
GACTCACCTTGGCCAAGCTGAAGCTCGAGCAACCGAACCTCCTCATCCTGGACGAGCCGACGAACCACTTGGACCTCGAC
TCGAAGATGATTTTGGAGAATGCCCTCCTCGACTATCCGGGCACGATTCTCTTCGTCTCGCATGACCGCTACTTCATCGA
TCGACTCGCGACGCGTGTGCTAGAGATCACACCGAACGGCATCGACGAGTATCTCGGGGACTATTCGTACTACGTCGAGA
AGAAAGAAGAGCTCGAGGAACTGGCGCGACTCGCCCGTGAAGAGACGAAGCAGGTCGTCGTGAAAAAACAACGCGCCGAT
AAGGAACAACAGCGAGAAGAGCGCCGCATCAAACAGCGCATCGAAGAGATTGAGCAAGCGATTGAGCAACATGAGAATCG
TCTTGATGAGATCGAACAGTTGCTTTGTGAGCCGGACGTCTTCAACGACTTCGCCCGTGCCCAGGAGTTGTCGACCGAAT
CGGACGCAGCGAAAGAATCGATTACCGCGCTCTATGCGGAATGGGAGGAACTCCATACATGA

Upstream 100 bases:

>100_bases
ACACCTTGATTGTAAACGAATTCACATGACCACTCAACGAATATACCTAAAATCGCTGAAAAATACAGTATACTAAATAG
AGAGAAAGGGGTTTTTTCAC

Downstream 100 bases:

>100_bases
TGCGTACCCGTGCCATGCGAATCGAGTTCATTCAAGCGTTCCTCACGGGACTCGCCTACATCGTGCCGGCCGGGACCGAG
TTCGTGTCTGAACTCATCCG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MILLQVNNLSKSFGVEPILENVKLEIQEGERVALVGRNGAGKSTLLKVIAGEYNYDSGDIMKPKDVTIGYLAQDSGLESD
ETIWNEMLTVFTDLIEQEKTLRRMEADMGSERILNDAAAYERLLSSYDEEQHTFKERGGYQYEATIRSVLHGMRFYPDDF
ERRIDTLSGGQRTRLALAKMLLQSPDLLILDEPTNHLDIETLAWLEKYLSGYKGAVLIVSHDRYFLDRVVSVVYELSRHR
SRRFVGNYTKYLEQKAALYEQEKKQFESQQEEIAKMQDFIQRNIARATTTKRAQSVRKRLEKVDRLDAPDGDERSAVLSF
SIKRQSGNDVLSASDLAIGYEEAIAQNLRFQLQRGESVALVGPNGVGKSTLLKVLTKQQAALTGDIRYGTGVEIGYYDQE
QQNLSDANRVIDEIWNDWPLMREQEVRSLLGQFLFSGDDVMKRVHELSGGERARLTLAKLKLEQPNLLILDEPTNHLDLD
SKMILENALLDYPGTILFVSHDRYFIDRLATRVLEITPNGIDEYLGDYSYYVEKKEELEELARLAREETKQVVVKKQRAD
KEQQREERRIKQRIEEIEQAIEQHENRLDEIEQLLCEPDVFNDFARAQELSTESDAAKESITALYAEWEELHT

Sequences:

>Translated_633_residues
MILLQVNNLSKSFGVEPILENVKLEIQEGERVALVGRNGAGKSTLLKVIAGEYNYDSGDIMKPKDVTIGYLAQDSGLESD
ETIWNEMLTVFTDLIEQEKTLRRMEADMGSERILNDAAAYERLLSSYDEEQHTFKERGGYQYEATIRSVLHGMRFYPDDF
ERRIDTLSGGQRTRLALAKMLLQSPDLLILDEPTNHLDIETLAWLEKYLSGYKGAVLIVSHDRYFLDRVVSVVYELSRHR
SRRFVGNYTKYLEQKAALYEQEKKQFESQQEEIAKMQDFIQRNIARATTTKRAQSVRKRLEKVDRLDAPDGDERSAVLSF
SIKRQSGNDVLSASDLAIGYEEAIAQNLRFQLQRGESVALVGPNGVGKSTLLKVLTKQQAALTGDIRYGTGVEIGYYDQE
QQNLSDANRVIDEIWNDWPLMREQEVRSLLGQFLFSGDDVMKRVHELSGGERARLTLAKLKLEQPNLLILDEPTNHLDLD
SKMILENALLDYPGTILFVSHDRYFIDRLATRVLEITPNGIDEYLGDYSYYVEKKEELEELARLAREETKQVVVKKQRAD
KEQQREERRIKQRIEEIEQAIEQHENRLDEIEQLLCEPDVFNDFARAQELSTESDAAKESITALYAEWEELHT
>Mature_633_residues
MILLQVNNLSKSFGVEPILENVKLEIQEGERVALVGRNGAGKSTLLKVIAGEYNYDSGDIMKPKDVTIGYLAQDSGLESD
ETIWNEMLTVFTDLIEQEKTLRRMEADMGSERILNDAAAYERLLSSYDEEQHTFKERGGYQYEATIRSVLHGMRFYPDDF
ERRIDTLSGGQRTRLALAKMLLQSPDLLILDEPTNHLDIETLAWLEKYLSGYKGAVLIVSHDRYFLDRVVSVVYELSRHR
SRRFVGNYTKYLEQKAALYEQEKKQFESQQEEIAKMQDFIQRNIARATTTKRAQSVRKRLEKVDRLDAPDGDERSAVLSF
SIKRQSGNDVLSASDLAIGYEEAIAQNLRFQLQRGESVALVGPNGVGKSTLLKVLTKQQAALTGDIRYGTGVEIGYYDQE
QQNLSDANRVIDEIWNDWPLMREQEVRSLLGQFLFSGDDVMKRVHELSGGERARLTLAKLKLEQPNLLILDEPTNHLDLD
SKMILENALLDYPGTILFVSHDRYFIDRLATRVLEITPNGIDEYLGDYSYYVEKKEELEELARLAREETKQVVVKKQRAD
KEQQREERRIKQRIEEIEQAIEQHENRLDEIEQLLCEPDVFNDFARAQELSTESDAAKESITALYAEWEELHT

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=540, Percent_Identity=31.1111111111111, Blast_Score=247, Evalue=3e-65,
Organism=Homo sapiens, GI27881506, Length=540, Percent_Identity=31.1111111111111, Blast_Score=247, Evalue=3e-65,
Organism=Homo sapiens, GI148612853, Length=523, Percent_Identity=31.1663479923518, Blast_Score=232, Evalue=1e-60,
Organism=Homo sapiens, GI10947135, Length=544, Percent_Identity=31.0661764705882, Blast_Score=209, Evalue=8e-54,
Organism=Homo sapiens, GI69354671, Length=544, Percent_Identity=31.0661764705882, Blast_Score=209, Evalue=9e-54,
Organism=Homo sapiens, GI255708477, Length=228, Percent_Identity=27.6315789473684, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI1789751, Length=629, Percent_Identity=31.9554848966614, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI2367384, Length=527, Percent_Identity=34.5351043643264, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI1787041, Length=538, Percent_Identity=33.271375464684, Blast_Score=297, Evalue=2e-81,
Organism=Escherichia coli, GI1787182, Length=639, Percent_Identity=31.2989045383412, Blast_Score=275, Evalue=4e-75,
Organism=Escherichia coli, GI1788506, Length=578, Percent_Identity=23.7024221453287, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI48995001, Length=501, Percent_Identity=24.1516966067864, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082268, Length=198, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788225, Length=230, Percent_Identity=26.9565217391304, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=186, Percent_Identity=26.3440860215054, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788897, Length=223, Percent_Identity=29.1479820627803, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=28.780487804878, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789962, Length=193, Percent_Identity=24.8704663212435, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787164, Length=192, Percent_Identity=28.6458333333333, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=30.3538175046555, Blast_Score=235, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI17559834, Length=560, Percent_Identity=30.5357142857143, Blast_Score=229, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI17553372, Length=542, Percent_Identity=31.9188191881919, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17558664, Length=284, Percent_Identity=27.4647887323944, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25146777, Length=206, Percent_Identity=28.1553398058252, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=192, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI193208177, Length=216, Percent_Identity=26.8518518518519, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=527, Percent_Identity=31.8785578747628, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6321121, Length=520, Percent_Identity=31.3461538461538, Blast_Score=234, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6325030, Length=396, Percent_Identity=27.5252525252525, Blast_Score=121, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=395, Percent_Identity=26.3291139240506, Blast_Score=116, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6323278, Length=391, Percent_Identity=24.5524296675192, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24666836, Length=533, Percent_Identity=31.7073170731707, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=30.03663003663, Blast_Score=238, Evalue=1e-62,
Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=30.03663003663, Blast_Score=238, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24641342, Length=557, Percent_Identity=29.2639138240575, Blast_Score=222, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24641565, Length=215, Percent_Identity=28.3720930232558, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72831; Mature: 72831

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLQVNNLSKSFGVEPILENVKLEIQEGERVALVGRNGAGKSTLLKVIAGEYNYDSGDI
CEEEEEECCCHHCCCHHHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
MKPKDVTIGYLAQDSGLESDETIWNEMLTVFTDLIEQEKTLRRMEADMGSERILNDAAAY
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ERLLSSYDEEQHTFKERGGYQYEATIRSVLHGMRFYPDDFERRIDTLSGGQRTRLALAKM
HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
LLQSPDLLILDEPTNHLDIETLAWLEKYLSGYKGAVLIVSHDRYFLDRVVSVVYELSRHR
HHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
SRRFVGNYTKYLEQKAALYEQEKKQFESQQEEIAKMQDFIQRNIARATTTKRAQSVRKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKVDRLDAPDGDERSAVLSFSIKRQSGNDVLSASDLAIGYEEAIAQNLRFQLQRGESVAL
HHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEE
VGPNGVGKSTLLKVLTKQQAALTGDIRYGTGVEIGYYDQEQQNLSDANRVIDEIWNDWPL
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCC
MREQEVRSLLGQFLFSGDDVMKRVHELSGGERARLTLAKLKLEQPNLLILDEPTNHLDLD
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHEEEHHHHEECCCCEEEEECCCCCCCCC
SKMILENALLDYPGTILFVSHDRYFIDRLATRVLEITPNGIDEYLGDYSYYVEKKEELEE
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHH
LARLAREETKQVVVKKQRADKEQQREERRIKQRIEEIEQAIEQHENRLDEIEQLLCEPDV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FNDFARAQELSTESDAAKESITALYAEWEELHT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILLQVNNLSKSFGVEPILENVKLEIQEGERVALVGRNGAGKSTLLKVIAGEYNYDSGDI
CEEEEEECCCHHCCCHHHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
MKPKDVTIGYLAQDSGLESDETIWNEMLTVFTDLIEQEKTLRRMEADMGSERILNDAAAY
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ERLLSSYDEEQHTFKERGGYQYEATIRSVLHGMRFYPDDFERRIDTLSGGQRTRLALAKM
HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
LLQSPDLLILDEPTNHLDIETLAWLEKYLSGYKGAVLIVSHDRYFLDRVVSVVYELSRHR
HHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
SRRFVGNYTKYLEQKAALYEQEKKQFESQQEEIAKMQDFIQRNIARATTTKRAQSVRKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKVDRLDAPDGDERSAVLSFSIKRQSGNDVLSASDLAIGYEEAIAQNLRFQLQRGESVAL
HHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEE
VGPNGVGKSTLLKVLTKQQAALTGDIRYGTGVEIGYYDQEQQNLSDANRVIDEIWNDWPL
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCC
MREQEVRSLLGQFLFSGDDVMKRVHELSGGERARLTLAKLKLEQPNLLILDEPTNHLDLD
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHEEEHHHHEECCCCEEEEECCCCCCCCC
SKMILENALLDYPGTILFVSHDRYFIDRLATRVLEITPNGIDEYLGDYSYYVEKKEELEE
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHH
LARLAREETKQVVVKKQRADKEQQREERRIKQRIEEIEQAIEQHENRLDEIEQLLCEPDV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FNDFARAQELSTESDAAKESITALYAEWEELHT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]