Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is ykrK [H]
Identifier: 229917747
GI number: 229917747
Start: 1977465
End: 1978088
Strand: Reverse
Name: ykrK [H]
Synonym: EAT1b_2025
Alternate gene names: 229917747
Gene position: 1978088-1977465 (Counterclockwise)
Preceding gene: 229917750
Following gene: 229917744
Centisome position: 65.94
GC content: 46.15
Gene sequence:
>624_bases ATGCGCGACGCAACTTCAATTCAAACTTTGGCAGATTGCCTTCATTTTATGCAGGTCGGAGAAATCGAGCGAGCCATCGC CCTCTTCCCTGAAGACGTGCGTGAACATTTCCCAAAAGAGCTTCGAAAAATCCACTTGTTTCATATTGAAAAGAACGGAT TATCGATTAATCAAATCGTCGCCCTCGCGAATGCATTGACCGGCGAGCATCTCTCCGCGACGACGATTCAAAACTGGACG AAGCGTGAAGTTCGTAAAATCATCGGTGTCCCACGAATCGGTAAAAAGTATTCCTTGCATCAAGCGGCAATCATTTATCT CCTTGATGACTTGAAACACCTTTTTTCTCTCGAAGAGACGAGTTCCTTGTTGGCGCTCATTTTCAACAACCCTGACCGGG ACGAAGACGACTTCATCAAACCGATTGATTTTTATCGACTGTACGCGGAGTATGCGAAGTCAACGAGCCCGATTGACCTC CTCGATACACGGGCGAAGCGTTCGCTCGAAAAGATGAACTATGAACATCCAAATATCATTCATGTCTTGAAGCTTTGTCT ATACGCACATCGGGTGACGACACTTGAACTCGAGGCCAAGCACTACTTGAACCGTTTCATTTGA
Upstream 100 bases:
>100_bases AATCAGTGCCCATCCTAGCTTACTTTTCAAACATTTGGTAGAATGAGGTCAAATGACTGTATAGCCAACGTACGCTGTTG GCGATAGAAAGGGTGGCCGT
Downstream 100 bases:
>100_bases TGAGACGGTTTTTTCGCACCAAAAAACACCGGTCGGTTGACCGGTGCTCGTCATCGTTATGAGACAGATGCTGCGAGTGG CATGCGCGATTTGACCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRDATSIQTLADCLHFMQVGEIERAIALFPEDVREHFPKELRKIHLFHIEKNGLSINQIVALANALTGEHLSATTIQNWT KREVRKIIGVPRIGKKYSLHQAAIIYLLDDLKHLFSLEETSSLLALIFNNPDRDEDDFIKPIDFYRLYAEYAKSTSPIDL LDTRAKRSLEKMNYEHPNIIHVLKLCLYAHRVTTLELEAKHYLNRFI
Sequences:
>Translated_207_residues MRDATSIQTLADCLHFMQVGEIERAIALFPEDVREHFPKELRKIHLFHIEKNGLSINQIVALANALTGEHLSATTIQNWT KREVRKIIGVPRIGKKYSLHQAAIIYLLDDLKHLFSLEETSSLLALIFNNPDRDEDDFIKPIDFYRLYAEYAKSTSPIDL LDTRAKRSLEKMNYEHPNIIHVLKLCLYAHRVTTLELEAKHYLNRFI >Mature_207_residues MRDATSIQTLADCLHFMQVGEIERAIALFPEDVREHFPKELRKIHLFHIEKNGLSINQIVALANALTGEHLSATTIQNWT KREVRKIIGVPRIGKKYSLHQAAIIYLLDDLKHLFSLEETSSLLALIFNNPDRDEDDFIKPIDFYRLYAEYAKSTSPIDL LDTRAKRSLEKMNYEHPNIIHVLKLCLYAHRVTTLELEAKHYLNRFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014975 [H]
Pfam domain/function: PF08876 DUF1836 [H]
EC number: NA
Molecular weight: Translated: 24093; Mature: 24093
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDATSIQTLADCLHFMQVGEIERAIALFPEDVREHFPKELRKIHLFHIEKNGLSINQIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHH ALANALTGEHLSATTIQNWTKREVRKIIGVPRIGKKYSLHQAAIIYLLDDLKHLFSLEET HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SSLLALIFNNPDRDEDDFIKPIDFYRLYAEYAKSTSPIDLLDTRAKRSLEKMNYEHPNII HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHH HVLKLCLYAHRVTTLELEAKHYLNRFI HHHHHHHHHHHHHHEEHHHHHHHHHCC >Mature Secondary Structure MRDATSIQTLADCLHFMQVGEIERAIALFPEDVREHFPKELRKIHLFHIEKNGLSINQIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHH ALANALTGEHLSATTIQNWTKREVRKIIGVPRIGKKYSLHQAAIIYLLDDLKHLFSLEET HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SSLLALIFNNPDRDEDDFIKPIDFYRLYAEYAKSTSPIDLLDTRAKRSLEKMNYEHPNII HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHH HVLKLCLYAHRVTTLELEAKHYLNRFI HHHHHHHHHHHHHHEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]