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The map label for this gene is yibD [H]

Identifier: 229916795

GI number: 229916795

Start: 1022020

End: 1024665

Strand: Reverse

Name: yibD [H]

Synonym: EAT1b_1068

Alternate gene names: 229916795

Gene position: 1024665-1022020 (Counterclockwise)

Preceding gene: 229916796

Following gene: 229916794

Centisome position: 34.16

GC content: 52.38

Gene sequence:

>2646_bases
ATGGATGTAAAAGCGACGCTACGCGACGTGCAAAAGCATATCGCGTGGTTAAAAGAAGAAAAAGAACGAGTCAACCGAAA
AGAGGCATTGGTCGGGGATGACTTGATTACCTTAGATGAACTTCCTTCTTTGTCGAGACAGGCGCAACGCCCGCGTCTAG
ATGACAAACTGTTCGAGGAACAACAAACCGCATTACAGGCAGAGCTCGAAGCAGCTCGGAAACGCCTCCCAGAACTTGAT
GTGACACGCATCCAGTCGAACGGGAGCAGTTTTTATGAGAAGGCGAATGTGCATGTCGCGTTCGTCGGACCGGTCAAGCG
GGCCAAAGAGCTCGAACGTCTTTGTCACACCCATTACTTTGAGAACGTGACAGGCTTTTTAGAGTTGCTTGAAGCAGAAG
ACATCGATTTCCTGCTCATCTCGGCAGCGCTCACAGAAGATAAGACGACGGCCTTCCATCACATGGGGACGCCACGCTCG
CACTCTCGTCACTGGCTCGGAAACTTGATTCGCAAGGCGAAACAAAAGGAGATCCGTGTCGTCTTCGAAACGACACTCGA
TACGAATCATTTCGACCGCTTCTCGTCACTTGCCGCGCAATGTGATTACATCTTCACGGCAAACGAGGAGCGTGTGACGG
AATATATGGAAGAAGCCGGGCATGAACGGGTCTTCGTCATCCGTCCGGGAGTCGACCCGCTTCACGTCAATCCGATCGGG
ATGACGCGCGGCAAGGTAGACCGTGTCGTCGTAACGAACCGTTTTCCCGTCCAACGGTTCGCAAAAGATTTGGAGACGCT
CGCGCAAGGCGTTCGCGATGCGAACAAAGAACTCTATGTGATGCGTGAGGCGAATGAGTCGAAAGCGTCACTCGCACCGA
AGTCGCTTCAAGATGTCCTCGTCCATGGGGACCCTGAGGATATGGAGAAGCTGAAAGAGACATCGAATTGGGTGCTTCAC
GTCAATGAAGTGAAGAACAGTCCGACGATGAGCGCGCAAGCCATCTATGAGGCACAGGCTCGCGGGCAACTCGTCTTGAC
GAACTACAACGTCGCCGTCAACAACGACTTCCCGAACGTGTTCATCGCCACAAGCGCCTTGGACGCCCAAGGGATTTTAG
AGATGTTTAAGACGGACGAAGAGCGTCTCGAGCATCAACTGTCTGGTGTCCGGACCATCTTCTCGAACCATACGATGTAC
GACCGCTTCAGTGAGATGTTGTTCACTCTCGGCATCCACCATGAAATCCGTCGTGACGTCCTCGTCATCGGTCGCGGTGA
TGTGACGGCGACACGTGAACAGTTCGAGCGTCAGTCATATCCGCACAAGCGCTTCGTCGCCGAAGCGGATCTACAAGAAG
TCGACCTACGTACAGCCGACTTTGTGACCGTGTTTGACGACCGTCATCACTATCTCGACTACTATGTGGAAGACTTAGTC
AACGCCTTCAAATACACGGACGTCTCGTTCGTGACGAAAGGACAGGACACCATCCATGAGTTCGTAGAAGACTATGCTGA
TGTGGCCTTAACGATGTTCGCGGCTAGTCACGTGTCGCTTGAAACGCTTCGGAACGACCAACGCGTCGAAGGTCAAGGCT
ATGCCATCGATCATTTCGAACTGCTCGCCCCAGATGACGTGCTCGTCCCGAACGAACCAGGTGACTATCAGCTTTCGATG
ATTGTCCCGATTTATAACAACGGTCGCTATCTATACAACAAGTGTTTCTCGAGTCTTCGCCGTAGCTCGATGTTTGAAGA
CATGGAGATCTGGCTCGTCGACGACGGTTCAACGGACCAAGAGACGATCGGTTATATCGAACGTCTCGTCCGGAAGTATC
CGAACGTCTACACGTACTCGTTCAACGACGGCGGTAGCGGGAGCGCCTCACGTCCACGGAACAAAGGGGTGGAGCTCGCG
ACGACGCCATATATCGCCTTCCTTGACCCGGACAATGAAGCGGTCAACGACGGCTATGCGGCACTGTTCCGTGTCATGCA
AGAGGATGACACGCTCGACCTCTCTGTCGGAAGCATGTTGAAGCTTGCGAACCGTGAAGCGATGATCGAACTCGAAGACC
TCGAGAAAGATGGCGTTCGCGTCATCGAAGACCCGAGAGCCTACTTGCTCGAGCACAACTTCAAGGTGCAGAGTATCCAG
ACGATGGTCATCAAAAAAGACTTCATCCAGAAGCATGATTTGAAACAAGTCATCGGCGCGGTCGGACAAGACTCACTTTT
CTTCCAAGAGATGTTCCTCAGCGCAGGACGCGTCGCTCTGCTCGACTTGACGATCCATGACTATTACGCGGCCGTCGCCG
GTTCGACGGTCAATACAATCACGAAGAAATACTTTATGAAGTGTGTCATCCGGGAGACGGCAAGGGCGAAAGCGTTCGCT
CGCGAAGGCGTACTCGACCAATACCGCTCGACTCGATTCGAACGGTTCTTCTCGATGTGGTACCTCGTCTTCTTACGCCG
CAGCAAGCCGGAAGAATTCTTCGACAACGCCGGAATGCTTTATGAAATCATCGAACAGTATCGTCCGATGGAACTAGAGA
CGCCGATTGTGAAACAGTTCGTCGACTTATATGAATCAGGACAAAAAGAAGAATTGAAGCGTCTCTATTTTGACGCATAC
TTGTGA

Upstream 100 bases:

>100_bases
GGGCCGTACATTTGTCATCAAATTGCGACCGACATGTAACTCTGTTAAGATACGATAAGATGAAGAAATACTGATTACTT
AAAAAAGGTGGAGCGGACGT

Downstream 100 bases:

>100_bases
GGTGAGACCATGAGCAATGAACTAGAAAAAGAAATCGGATTGTTGAAACAGCGAATCAAACTTCAAGAAGAGGAGATTCG
TCATCTGAAGCACGATGAAC

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 881; Mature: 881

Protein sequence:

>881_residues
MDVKATLRDVQKHIAWLKEEKERVNRKEALVGDDLITLDELPSLSRQAQRPRLDDKLFEEQQTALQAELEAARKRLPELD
VTRIQSNGSSFYEKANVHVAFVGPVKRAKELERLCHTHYFENVTGFLELLEAEDIDFLLISAALTEDKTTAFHHMGTPRS
HSRHWLGNLIRKAKQKEIRVVFETTLDTNHFDRFSSLAAQCDYIFTANEERVTEYMEEAGHERVFVIRPGVDPLHVNPIG
MTRGKVDRVVVTNRFPVQRFAKDLETLAQGVRDANKELYVMREANESKASLAPKSLQDVLVHGDPEDMEKLKETSNWVLH
VNEVKNSPTMSAQAIYEAQARGQLVLTNYNVAVNNDFPNVFIATSALDAQGILEMFKTDEERLEHQLSGVRTIFSNHTMY
DRFSEMLFTLGIHHEIRRDVLVIGRGDVTATREQFERQSYPHKRFVAEADLQEVDLRTADFVTVFDDRHHYLDYYVEDLV
NAFKYTDVSFVTKGQDTIHEFVEDYADVALTMFAASHVSLETLRNDQRVEGQGYAIDHFELLAPDDVLVPNEPGDYQLSM
IVPIYNNGRYLYNKCFSSLRRSSMFEDMEIWLVDDGSTDQETIGYIERLVRKYPNVYTYSFNDGGSGSASRPRNKGVELA
TTPYIAFLDPDNEAVNDGYAALFRVMQEDDTLDLSVGSMLKLANREAMIELEDLEKDGVRVIEDPRAYLLEHNFKVQSIQ
TMVIKKDFIQKHDLKQVIGAVGQDSLFFQEMFLSAGRVALLDLTIHDYYAAVAGSTVNTITKKYFMKCVIRETARAKAFA
REGVLDQYRSTRFERFFSMWYLVFLRRSKPEEFFDNAGMLYEIIEQYRPMELETPIVKQFVDLYESGQKEELKRLYFDAY
L

Sequences:

>Translated_881_residues
MDVKATLRDVQKHIAWLKEEKERVNRKEALVGDDLITLDELPSLSRQAQRPRLDDKLFEEQQTALQAELEAARKRLPELD
VTRIQSNGSSFYEKANVHVAFVGPVKRAKELERLCHTHYFENVTGFLELLEAEDIDFLLISAALTEDKTTAFHHMGTPRS
HSRHWLGNLIRKAKQKEIRVVFETTLDTNHFDRFSSLAAQCDYIFTANEERVTEYMEEAGHERVFVIRPGVDPLHVNPIG
MTRGKVDRVVVTNRFPVQRFAKDLETLAQGVRDANKELYVMREANESKASLAPKSLQDVLVHGDPEDMEKLKETSNWVLH
VNEVKNSPTMSAQAIYEAQARGQLVLTNYNVAVNNDFPNVFIATSALDAQGILEMFKTDEERLEHQLSGVRTIFSNHTMY
DRFSEMLFTLGIHHEIRRDVLVIGRGDVTATREQFERQSYPHKRFVAEADLQEVDLRTADFVTVFDDRHHYLDYYVEDLV
NAFKYTDVSFVTKGQDTIHEFVEDYADVALTMFAASHVSLETLRNDQRVEGQGYAIDHFELLAPDDVLVPNEPGDYQLSM
IVPIYNNGRYLYNKCFSSLRRSSMFEDMEIWLVDDGSTDQETIGYIERLVRKYPNVYTYSFNDGGSGSASRPRNKGVELA
TTPYIAFLDPDNEAVNDGYAALFRVMQEDDTLDLSVGSMLKLANREAMIELEDLEKDGVRVIEDPRAYLLEHNFKVQSIQ
TMVIKKDFIQKHDLKQVIGAVGQDSLFFQEMFLSAGRVALLDLTIHDYYAAVAGSTVNTITKKYFMKCVIRETARAKAFA
REGVLDQYRSTRFERFFSMWYLVFLRRSKPEEFFDNAGMLYEIIEQYRPMELETPIVKQFVDLYESGQKEELKRLYFDAY
L
>Mature_881_residues
MDVKATLRDVQKHIAWLKEEKERVNRKEALVGDDLITLDELPSLSRQAQRPRLDDKLFEEQQTALQAELEAARKRLPELD
VTRIQSNGSSFYEKANVHVAFVGPVKRAKELERLCHTHYFENVTGFLELLEAEDIDFLLISAALTEDKTTAFHHMGTPRS
HSRHWLGNLIRKAKQKEIRVVFETTLDTNHFDRFSSLAAQCDYIFTANEERVTEYMEEAGHERVFVIRPGVDPLHVNPIG
MTRGKVDRVVVTNRFPVQRFAKDLETLAQGVRDANKELYVMREANESKASLAPKSLQDVLVHGDPEDMEKLKETSNWVLH
VNEVKNSPTMSAQAIYEAQARGQLVLTNYNVAVNNDFPNVFIATSALDAQGILEMFKTDEERLEHQLSGVRTIFSNHTMY
DRFSEMLFTLGIHHEIRRDVLVIGRGDVTATREQFERQSYPHKRFVAEADLQEVDLRTADFVTVFDDRHHYLDYYVEDLV
NAFKYTDVSFVTKGQDTIHEFVEDYADVALTMFAASHVSLETLRNDQRVEGQGYAIDHFELLAPDDVLVPNEPGDYQLSM
IVPIYNNGRYLYNKCFSSLRRSSMFEDMEIWLVDDGSTDQETIGYIERLVRKYPNVYTYSFNDGGSGSASRPRNKGVELA
TTPYIAFLDPDNEAVNDGYAALFRVMQEDDTLDLSVGSMLKLANREAMIELEDLEKDGVRVIEDPRAYLLEHNFKVQSIQ
TMVIKKDFIQKHDLKQVIGAVGQDSLFFQEMFLSAGRVALLDLTIHDYYAAVAGSTVNTITKKYFMKCVIRETARAKAFA
REGVLDQYRSTRFERFFSMWYLVFLRRSKPEEFFDNAGMLYEIIEQYRPMELETPIVKQFVDLYESGQKEELKRLYFDAY
L

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=218, Percent_Identity=28.8990825688073, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 101628; Mature: 101628

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKATLRDVQKHIAWLKEEKERVNRKEALVGDDLITLDELPSLSRQAQRPRLDDKLFEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHCCCCCCHHHHHH
QQTALQAELEAARKRLPELDVTRIQSNGSSFYEKANVHVAFVGPVKRAKELERLCHTHYF
HHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHCCEEEEEECCHHHHHHHHHHHHHHHH
ENVTGFLELLEAEDIDFLLISAALTEDKTTAFHHMGTPRSHSRHWLGNLIRKAKQKEIRV
HHHHHHHHHHHCCCCCEEEEEHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEE
VFETTLDTNHFDRFSSLAAQCDYIFTANEERVTEYMEEAGHERVFVIRPGVDPLHVNPIG
EEEECCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCEEEEECCCCCCEECCCCC
MTRGKVDRVVVTNRFPVQRFAKDLETLAQGVRDANKELYVMREANESKASLAPKSLQDVL
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCHHHHHHHH
VHGDPEDMEKLKETSNWVLHVNEVKNSPTMSAQAIYEAQARGQLVLTNYNVAVNNDFPNV
CCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCCE
FIATSALDAQGILEMFKTDEERLEHQLSGVRTIFSNHTMYDRFSEMLFTLGIHHEIRRDV
EEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCE
LVIGRGDVTATREQFERQSYPHKRFVAEADLQEVDLRTADFVTVFDDRHHYLDYYVEDLV
EEEECCCCHHHHHHHHHHCCCHHHHHHHCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
NAFKYTDVSFVTKGQDTIHEFVEDYADVALTMFAASHVSLETLRNDQRVEGQGYAIDHFE
HHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEE
LLAPDDVLVPNEPGDYQLSMIVPIYNNGRYLYNKCFSSLRRSSMFEDMEIWLVDDGSTDQ
EECCCCEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH
ETIGYIERLVRKYPNVYTYSFNDGGSGSASRPRNKGVELATTPYIAFLDPDNEAVNDGYA
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCHHHH
ALFRVMQEDDTLDLSVGSMLKLANREAMIELEDLEKDGVRVIEDPRAYLLEHNFKVQSIQ
HHHHHHHCCCCCEECHHHHHHHHCCHHEEEHHHCCCCCCEEEECCHHHHHHCCCCHHHHH
TMVIKKDFIQKHDLKQVIGAVGQDSLFFQEMFLSAGRVALLDLTIHDYYAAVAGSTVNTI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCHHHHH
TKKYFMKCVIRETARAKAFAREGVLDQYRSTRFERFFSMWYLVFLRRSKPEEFFDNAGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHH
YEIIEQYRPMELETPIVKQFVDLYESGQKEELKRLYFDAYL
HHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDVKATLRDVQKHIAWLKEEKERVNRKEALVGDDLITLDELPSLSRQAQRPRLDDKLFEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHCCCCCCHHHHHH
QQTALQAELEAARKRLPELDVTRIQSNGSSFYEKANVHVAFVGPVKRAKELERLCHTHYF
HHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHCCEEEEEECCHHHHHHHHHHHHHHHH
ENVTGFLELLEAEDIDFLLISAALTEDKTTAFHHMGTPRSHSRHWLGNLIRKAKQKEIRV
HHHHHHHHHHHCCCCCEEEEEHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEE
VFETTLDTNHFDRFSSLAAQCDYIFTANEERVTEYMEEAGHERVFVIRPGVDPLHVNPIG
EEEECCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCEEEEECCCCCCEECCCCC
MTRGKVDRVVVTNRFPVQRFAKDLETLAQGVRDANKELYVMREANESKASLAPKSLQDVL
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCHHHHHHHH
VHGDPEDMEKLKETSNWVLHVNEVKNSPTMSAQAIYEAQARGQLVLTNYNVAVNNDFPNV
CCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCCE
FIATSALDAQGILEMFKTDEERLEHQLSGVRTIFSNHTMYDRFSEMLFTLGIHHEIRRDV
EEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCE
LVIGRGDVTATREQFERQSYPHKRFVAEADLQEVDLRTADFVTVFDDRHHYLDYYVEDLV
EEEECCCCHHHHHHHHHHCCCHHHHHHHCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
NAFKYTDVSFVTKGQDTIHEFVEDYADVALTMFAASHVSLETLRNDQRVEGQGYAIDHFE
HHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEE
LLAPDDVLVPNEPGDYQLSMIVPIYNNGRYLYNKCFSSLRRSSMFEDMEIWLVDDGSTDQ
EECCCCEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH
ETIGYIERLVRKYPNVYTYSFNDGGSGSASRPRNKGVELATTPYIAFLDPDNEAVNDGYA
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCHHHH
ALFRVMQEDDTLDLSVGSMLKLANREAMIELEDLEKDGVRVIEDPRAYLLEHNFKVQSIQ
HHHHHHHCCCCCEECHHHHHHHHCCHHEEEHHHCCCCCCEEEECCHHHHHHCCCCHHHHH
TMVIKKDFIQKHDLKQVIGAVGQDSLFFQEMFLSAGRVALLDLTIHDYYAAVAGSTVNTI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCHHHHH
TKKYFMKCVIRETARAKAFAREGVLDQYRSTRFERFFSMWYLVFLRRSKPEEFFDNAGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHH
YEIIEQYRPMELETPIVKQFVDLYESGQKEELKRLYFDAYL
HHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]