| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827110
Identifier: 227827110
GI number: 227827110
Start: 725316
End: 725843
Strand: Direct
Name: 227827110
Synonym: M1425_0779
Alternate gene names: NA
Gene position: 725316-725843 (Clockwise)
Preceding gene: 227827104
Following gene: 227827117
Centisome position: 27.8
GC content: 36.55
Gene sequence:
>528_bases ATGGAGTCAAAAATACCAACAATCGAAAAGCACAGAGATGCTTATATTAAGATCAAGATAATCGAAAGCTTAGAAGAACT GACATTAGCGTCAAAGTTACTGAAGGAGGGTTTTAGTAGGAATTCAGCCGGCAAAATTTTCCTATCATGGAAGGCATTTA TTAGTGCTTTGACAGTGATGAATTTAGAAAAAATGCCTAAAGACGAGAAAGAGAAGGAATGGTATTATAAGACCGGCTTT CTAACCCCTACAACCGGTTTAAAGGGGATTTCACAGAGGTTAGAAGAACTGGGATATAAGGTAAACCATTTAACTTCTAC AGCGTTAGCCTTACATAGGTATGCCTATAATGGATTATATAAGGGCGCTAGCGATTACTCCGATAGAAATGAGGCAATTA GAGATATAATTTCCCTTTCACAGGAGATAATAGCTCTGGTTAGAGAGTATTTTAAAAATTACTGGGATGATGAGATTGAA AACCATTACAGAATTGCGGAAAAGGAGTTAAGAAAACTGTTAAGCTAG
Upstream 100 bases:
>100_bases ATATTGGAGGAGGGAAGAAGATTACATCAGGCTGAAGGAGAATATATCCTGCACAATTTCCTTAAGCTAACTATTTATCC CTTCCAATAAAGTTAATTAT
Downstream 100 bases:
>100_bases CGAATAATACTCAAATTGCTTAAATACTTCTTTCGTACTCTAAATTCGATGAAGTGCGAAATAAACTTCAAGGAGGACTT AGCAGCAATACTAATTGATG
Product: PaREP1 family protein
Products: NA
Alternate protein names: PaREP1 Domain-Containing Protein
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MESKIPTIEKHRDAYIKIKIIESLEELTLASKLLKEGFSRNSAGKIFLSWKAFISALTVMNLEKMPKDEKEKEWYYKTGF LTPTTGLKGISQRLEELGYKVNHLTSTALALHRYAYNGLYKGASDYSDRNEAIRDIISLSQEIIALVREYFKNYWDDEIE NHYRIAEKELRKLLS
Sequences:
>Translated_175_residues MESKIPTIEKHRDAYIKIKIIESLEELTLASKLLKEGFSRNSAGKIFLSWKAFISALTVMNLEKMPKDEKEKEWYYKTGF LTPTTGLKGISQRLEELGYKVNHLTSTALALHRYAYNGLYKGASDYSDRNEAIRDIISLSQEIIALVREYFKNYWDDEIE NHYRIAEKELRKLLS >Mature_175_residues MESKIPTIEKHRDAYIKIKIIESLEELTLASKLLKEGFSRNSAGKIFLSWKAFISALTVMNLEKMPKDEKEKEWYYKTGF LTPTTGLKGISQRLEELGYKVNHLTSTALALHRYAYNGLYKGASDYSDRNEAIRDIISLSQEIIALVREYFKNYWDDEIE NHYRIAEKELRKLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20419; Mature: 20419
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESKIPTIEKHRDAYIKIKIIESLEELTLASKLLKEGFSRNSAGKIFLSWKAFISALTVM CCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH NLEKMPKDEKEKEWYYKTGFLTPTTGLKGISQRLEELGYKVNHLTSTALALHRYAYNGLY HHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH KGASDYSDRNEAIRDIISLSQEIIALVREYFKNYWDDEIENHYRIAEKELRKLLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MESKIPTIEKHRDAYIKIKIIESLEELTLASKLLKEGFSRNSAGKIFLSWKAFISALTVM CCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH NLEKMPKDEKEKEWYYKTGFLTPTTGLKGISQRLEELGYKVNHLTSTALALHRYAYNGLY HHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH KGASDYSDRNEAIRDIISLSQEIIALVREYFKNYWDDEIENHYRIAEKELRKLLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA