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The map label for this gene is ydeD [C]

Identifier: 227827098

GI number: 227827098

Start: 709785

End: 710609

Strand: Direct

Name: ydeD [C]

Synonym: M1425_0764

Alternate gene names: 227827098

Gene position: 709785-710609 (Clockwise)

Preceding gene: 227827095

Following gene: 227827104

Centisome position: 27.21

GC content: 38.3

Gene sequence:

>825_bases
ATGCAGAGAACTACAATCTCATTCCTTAGGTGGATAGTTCCGTTGTCATTATTCTGGGGTTTTGCCTTCCCCTTAACTAA
AATAATTGCCTACTCAGCATCGCCCATGATCATTAGTGCATTTAGAGTTGGGATAGCTGCAATTTTCTTTCTCGCTCTAG
GGAAGGGGTTATCAGTGGGTAAGAAACAATTCGTAAATGGCTTGCTTAACTTCGCGTTCTTCTTAATTCTCATAAATCTT
GGAATTGGGTTATCTCCAAATCCAGGTTTAGTAGCGGTAATGATATATACACAACCAATTTTTGTTCTGATAATTGAAAG
GTTACTGGGTTATAAGATCACACCTAAAGGGATTATCGGAGTAGTTTTAGGAGTAATTGGAGTAATATCTTCAGCAACCT
TATCATTTGATATTGGGTTGGTTTTCGGATTGTTGGCTGGGATATTATGGGCTGTAGGTACTATTTATTACTCCAGAAAT
TTAGCTAATGAAAACATCGCTAAACTTAACGCATTTATGGCCCTAACCTCAGTTCCCATAGTCCTAGCTTTTACTCCAAT
CGACTACTATTTCAAATTTAGCCTAGTTACACTATCCTTAATTTTACTTTTAGCTATCATAGCCCAAATTCTAGGATTTT
ACTTCTGGTTTAATGGAGTTAGGGAATTGGGAACCGTTTACGCAAGTACTGGGTCTTTATTAGTACCAGTAATGGCTTAC
GTTACCAGTTTCGCCGTGTTGGGCGTAATCCCAACGTTATTCCAGATAATTGGCTCCGTGATAACCCTATTTGGAGTTTA
CCTTACCATTACCAGTAGAAGTTAG

Upstream 100 bases:

>100_bases
ACCTTATCGATAATTCACGAAAATAATGAACTCTCATTAAAAGTTATAAATAAAACCGAGCTTAAGATTTTTAATCTTTA
ACTATTTTCTGTTTAACTGC

Downstream 100 bases:

>100_bases
TTTATAGAAATTGATTAGACTGCTATAGGCTATAAGAAGAGAATTTAATTTGACTAACTTCTCATCTTTGAGGTCATAAT
AATTTATTTGGATTTTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRVGIAAIFFLALGKGLSVGKKQFVNGLLNFAFFLILINL
GIGLSPNPGLVAVMIYTQPIFVLIIERLLGYKITPKGIIGVVLGVIGVISSATLSFDIGLVFGLLAGILWAVGTIYYSRN
LANENIAKLNAFMALTSVPIVLAFTPIDYYFKFSLVTLSLILLLAIIAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
VTSFAVLGVIPTLFQIIGSVITLFGVYLTITSRS

Sequences:

>Translated_274_residues
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRVGIAAIFFLALGKGLSVGKKQFVNGLLNFAFFLILINL
GIGLSPNPGLVAVMIYTQPIFVLIIERLLGYKITPKGIIGVVLGVIGVISSATLSFDIGLVFGLLAGILWAVGTIYYSRN
LANENIAKLNAFMALTSVPIVLAFTPIDYYFKFSLVTLSLILLLAIIAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
VTSFAVLGVIPTLFQIIGSVITLFGVYLTITSRS
>Mature_274_residues
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRVGIAAIFFLALGKGLSVGKKQFVNGLLNFAFFLILINL
GIGLSPNPGLVAVMIYTQPIFVLIIERLLGYKITPKGIIGVVLGVIGVISSATLSFDIGLVFGLLAGILWAVGTIYYSRN
LANENIAKLNAFMALTSVPIVLAFTPIDYYFKFSLVTLSLILLLAIIAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
VTSFAVLGVIPTLFQIIGSVITLFGVYLTITSRS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29747; Mature: 29747

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRVGIAAIFFLALGKGLSVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
KKQFVNGLLNFAFFLILINLGIGLSPNPGLVAVMIYTQPIFVLIIERLLGYKITPKGIIG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH
VVLGVIGVISSATLSFDIGLVFGLLAGILWAVGTIYYSRNLANENIAKLNAFMALTSVPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH
VLAFTPIDYYFKFSLVTLSLILLLAIIAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
HEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VTSFAVLGVIPTLFQIIGSVITLFGVYLTITSRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRVGIAAIFFLALGKGLSVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
KKQFVNGLLNFAFFLILINLGIGLSPNPGLVAVMIYTQPIFVLIIERLLGYKITPKGIIG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH
VVLGVIGVISSATLSFDIGLVFGLLAGILWAVGTIYYSRNLANENIAKLNAFMALTSVPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH
VLAFTPIDYYFKFSLVTLSLILLLAIIAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
HEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VTSFAVLGVIPTLFQIIGSVITLFGVYLTITSRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA