| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826948
Identifier: 227826948
GI number: 227826948
Start: 540027
End: 540989
Strand: Direct
Name: 227826948
Synonym: M1425_0602
Alternate gene names: NA
Gene position: 540027-540989 (Clockwise)
Preceding gene: 227826947
Following gene: 227826950
Centisome position: 20.7
GC content: 30.74
Gene sequence:
>963_bases TTGTCTAATTCCCCTTTTTTCCTAGATTATTTAGAAGATGGGTTGGTAGATTGGAATCGTGCATTAGATGCTAAAGAACT CATAAAGAATAAATATGAGAAGTTACTTAAAGAGGGTTTGATTTCTAAGGAAGAGTTAGAGAGATACGAATATAGAAAGA TATACGATTTGCAACAAGCAACAGAGAAAATATCGAAAGGATTACTTTTAATTTATGCCGGTATAATCCTATTACCCTTC TTAATAGTTGCTGAAATACGTAATTTTGACGTAAGGCATCCTAGGGAAATGCAAGAGATACTTAACAGTGCAGAAAAATT CATAAGAAAGAGTATTGATCTTAACGATATTGAGAAGTTAGGACATGAGCCTGTTAAGGTATCAAACTTAAAAGAGTTAC TCGAACTAACGCAGCATAGTTATAGAAGATATTTAGGGATTACAGACTTAGCTAAATGTTTAAAATCAATAGAAAACTTT ATCACCAGTTCACTTAAGAATAAGAAGTGGAAAACTCTTTGGGAAATCGTTAAGACTTGTGAAAAATCGTTCAATTTTAG TCAGTTTAGCCAAGAGGTTTTACAATTTCTTAAGAGATGTATTAGCGGTGATGAAGAGGCTTGCAAAAAGCTTAATTTGA GCGATGAAAAGCTTAGTAATTTACTAGAAAATCCTTATATTATAAGGTTCTCCCTTATTATGGCGGAATCTTCAATAAAG GAATTTCTTGACATGATTTTATTAACCTCCTATTTAGAACCTTTATCCACCGCATCTAGATATAGTATCTCCATAGATAA TGCAACAAGAGAATTATTAGAGGATGTTAAAGAGAATCAAGACAACATAATGTCGTTTCTAGAAGTCAAAATACAGATTA TTAAGAATTTGATAAAAAATGATGAATTTATGGAAAATATTAGCAAGATATATGAGATATTTAGAAAACTTTATCAATTA TAG
Upstream 100 bases:
>100_bases GATGCCCCTCAATAGTCTGCTTAAATACGTTTATATGAAATATCCAGAATACACTGTGAACTCATTAATTAGAGATAAGA TTTTTTAGGTGAGATTCTAA
Downstream 100 bases:
>100_bases ATAAAGCATAAATAAAATTGAGAAAGCCTTATCTAGATGTATCTTCTTTTCTCCCTATTTTAAGGAATATTAGTTCATCA TTAAGTTAAAGATATAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSNSPFFLDYLEDGLVDWNRALDAKELIKNKYEKLLKEGLISKEELERYEYRKIYDLQQATEKISKGLLLIYAGIILLPF LIVAEIRNFDVRHPREMQEILNSAEKFIRKSIDLNDIEKLGHEPVKVSNLKELLELTQHSYRRYLGITDLAKCLKSIENF ITSSLKNKKWKTLWEIVKTCEKSFNFSQFSQEVLQFLKRCISGDEEACKKLNLSDEKLSNLLENPYIIRFSLIMAESSIK EFLDMILLTSYLEPLSTASRYSISIDNATRELLEDVKENQDNIMSFLEVKIQIIKNLIKNDEFMENISKIYEIFRKLYQL
Sequences:
>Translated_320_residues MSNSPFFLDYLEDGLVDWNRALDAKELIKNKYEKLLKEGLISKEELERYEYRKIYDLQQATEKISKGLLLIYAGIILLPF LIVAEIRNFDVRHPREMQEILNSAEKFIRKSIDLNDIEKLGHEPVKVSNLKELLELTQHSYRRYLGITDLAKCLKSIENF ITSSLKNKKWKTLWEIVKTCEKSFNFSQFSQEVLQFLKRCISGDEEACKKLNLSDEKLSNLLENPYIIRFSLIMAESSIK EFLDMILLTSYLEPLSTASRYSISIDNATRELLEDVKENQDNIMSFLEVKIQIIKNLIKNDEFMENISKIYEIFRKLYQL >Mature_319_residues SNSPFFLDYLEDGLVDWNRALDAKELIKNKYEKLLKEGLISKEELERYEYRKIYDLQQATEKISKGLLLIYAGIILLPFL IVAEIRNFDVRHPREMQEILNSAEKFIRKSIDLNDIEKLGHEPVKVSNLKELLELTQHSYRRYLGITDLAKCLKSIENFI TSSLKNKKWKTLWEIVKTCEKSFNFSQFSQEVLQFLKRCISGDEEACKKLNLSDEKLSNLLENPYIIRFSLIMAESSIKE FLDMILLTSYLEPLSTASRYSISIDNATRELLEDVKENQDNIMSFLEVKIQIIKNLIKNDEFMENISKIYEIFRKLYQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37713; Mature: 37582
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSPFFLDYLEDGLVDWNRALDAKELIKNKYEKLLKEGLISKEELERYEYRKIYDLQQA CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TEKISKGLLLIYAGIILLPFLIVAEIRNFDVRHPREMQEILNSAEKFIRKSIDLNDIEKL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHC GHEPVKVSNLKELLELTQHSYRRYLGITDLAKCLKSIENFITSSLKNKKWKTLWEIVKTC CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EKSFNFSQFSQEVLQFLKRCISGDEEACKKLNLSDEKLSNLLENPYIIRFSLIMAESSIK HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH EFLDMILLTSYLEPLSTASRYSISIDNATRELLEDVKENQDNIMSFLEVKIQIIKNLIKN HHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC DEFMENISKIYEIFRKLYQL HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNSPFFLDYLEDGLVDWNRALDAKELIKNKYEKLLKEGLISKEELERYEYRKIYDLQQA CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TEKISKGLLLIYAGIILLPFLIVAEIRNFDVRHPREMQEILNSAEKFIRKSIDLNDIEKL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHC GHEPVKVSNLKELLELTQHSYRRYLGITDLAKCLKSIENFITSSLKNKKWKTLWEIVKTC CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EKSFNFSQFSQEVLQFLKRCISGDEEACKKLNLSDEKLSNLLENPYIIRFSLIMAESSIK HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH EFLDMILLTSYLEPLSTASRYSISIDNATRELLEDVKENQDNIMSFLEVKIQIIKNLIKN HHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC DEFMENISKIYEIFRKLYQL HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA