| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826947
Identifier: 227826947
GI number: 227826947
Start: 539556
End: 540014
Strand: Direct
Name: 227826947
Synonym: M1425_0601
Alternate gene names: NA
Gene position: 539556-540014 (Clockwise)
Preceding gene: 227826946
Following gene: 227826948
Centisome position: 20.68
GC content: 32.46
Gene sequence:
>459_bases ATGAATATGTTAATCATGAGTGCTAACAATAATAGTAAATACATTTTAGGCATACTGAAGATCGCTAAGGAATTGAATAT CCAAGTAACGGCTACAAGAATACAAAAAACTGTTTTCTTAGTTGAGAAGGAATTAAAGCTTGACTTAGGCTATAATTTCA TTCCCTTTTATTTCGGGCCTTTCAGTAAAGAGTTGCAAGACGACATATACAAGCTCAGTGAGTTAGGTTATGTGAAAATT AGGGAAGAGCCAGTTGAAGATCTCATTTCAGGCGTTATAGTTGGCTTTAAGAAGATTTATGAAATAAACGTAACTTTTGA CTTAAGTTCACTAGATAAAAACTTTGTCGACTTCGTTACTGAAAAGCTTAAGATGCCCCTCAATAGTCTGCTTAAATACG TTTATATGAAATATCCAGAATACACTGTGAACTCATTAATTAGAGATAAGATTTTTTAG
Upstream 100 bases:
>100_bases TCCTACCCATAAGTAATACTCGTTATACAAATATAAATAGCTTAACGACGACACTATCACCACACTCACCAACTCTCACG GAAAATTAATAAAGATATAA
Downstream 100 bases:
>100_bases GTGAGATTCTAATTGTCTAATTCCCCTTTTTTCCTAGATTATTTAGAAGATGGGTTGGTAGATTGGAATCGTGCATTAGA TGCTAAAGAACTCATAAAGA
Product: conjugative plasmid protein
Products: NA
Alternate protein names: Conserved Conjugative Plasmid Protein
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNMLIMSANNNSKYILGILKIAKELNIQVTATRIQKTVFLVEKELKLDLGYNFIPFYFGPFSKELQDDIYKLSELGYVKI REEPVEDLISGVIVGFKKIYEINVTFDLSSLDKNFVDFVTEKLKMPLNSLLKYVYMKYPEYTVNSLIRDKIF
Sequences:
>Translated_152_residues MNMLIMSANNNSKYILGILKIAKELNIQVTATRIQKTVFLVEKELKLDLGYNFIPFYFGPFSKELQDDIYKLSELGYVKI REEPVEDLISGVIVGFKKIYEINVTFDLSSLDKNFVDFVTEKLKMPLNSLLKYVYMKYPEYTVNSLIRDKIF >Mature_152_residues MNMLIMSANNNSKYILGILKIAKELNIQVTATRIQKTVFLVEKELKLDLGYNFIPFYFGPFSKELQDDIYKLSELGYVKI REEPVEDLISGVIVGFKKIYEINVTFDLSSLDKNFVDFVTEKLKMPLNSLLKYVYMKYPEYTVNSLIRDKIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17760; Mature: 17760
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMLIMSANNNSKYILGILKIAKELNIQVTATRIQKTVFLVEKELKLDLGYNFIPFYFGP CCEEEEECCCCCEEEHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECC FSKELQDDIYKLSELGYVKIREEPVEDLISGVIVGFKKIYEINVTFDLSSLDKNFVDFVT CHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHHH EKLKMPLNSLLKYVYMKYPEYTVNSLIRDKIF HHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MNMLIMSANNNSKYILGILKIAKELNIQVTATRIQKTVFLVEKELKLDLGYNFIPFYFGP CCEEEEECCCCCEEEHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECC FSKELQDDIYKLSELGYVKIREEPVEDLISGVIVGFKKIYEINVTFDLSSLDKNFVDFVT CHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHHH EKLKMPLNSLLKYVYMKYPEYTVNSLIRDKIF HHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA