| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826909
Identifier: 227826909
GI number: 227826909
Start: 489708
End: 490781
Strand: Direct
Name: 227826909
Synonym: M1425_0545
Alternate gene names: NA
Gene position: 489708-490781 (Clockwise)
Preceding gene: 227826908
Following gene: 227826910
Centisome position: 18.77
GC content: 40.5
Gene sequence:
>1074_bases ATGGTCGAAAGTAAAACTGAAGCAAAGTCTTCGGAAGTGGGCGTGACCAACCCCTACCGTCGGACTGAACATTGTGGAAA AATCCACGCATGTAGGTGTGACAAAGAGGTAGGGGTAATAGGAATAGATATATCAAAAGATCACTTAATAACTAGTAGGG GGAGGGTGAGAAAATACAAGAACAACAAAGAGGGATACGAAGAGATACTTGAAATGAAACCTTGTACAATAGTCCTAGAG CCTACTGGAGTTTACGCAATAAGGCCTTCACAATACTTCAAGGAGAGGGGGATAAAAGTACTACAAGTTAGTCCAAACGT GTTATCAAGGGAGAAGGAGTTTAGGGGAAAGAAAACAGATTTTTACGACGCTGAAAAATTAGAAAACATGGTTGATAAGG CTAAGGAGTACGAGTATAACCCCTTGAGGGAATTGGTAACACTCTACCTCTTCCTAAAGGATATAGAGGTAAAGTACAAG AATAGGCTTAAGAGGGCACTATTCCTAGTAAGCGACAACGACAGGATAAGCAAGGATAGGTTAGAAAGACTTGCAAAGGG AGATTTTACGCAAGAAGAGCTTTACAACCTTGAATACACACCAATAGTGCTTGAAGAAATCAAAGTCCTAGCAAAAACAC TCCTAGAAATGCAAGAGAAATTGAAAGAAGTTAGGAGGATGATTGAGGAACAAGTACCGGATAATCACGTCCTATTGACG ATACCGGCAATTGGTAGGCTTGCAGCTGGTATTATTATTGGTGTTGTTGGCGATATTAGGCGCTTTCCTAAACCAGAATC ATTTGTTGCTTATTGTGGTCTTGATCCTCTTGTTGAAAGGAGTGGAAAAGCTGTAATAAGTAGGGGGATTTCGAAGAGGG GTAATAAGTACTTGCGTAGTTTGTTTTACTTTTTGGCAGGGAGGAATTACTCTAGGAATCCTACTTTGCTGAAGTTTTAT GAAGCGCACAAGGATAGGCTTCAAGGTAAGAAGTTATTCACTGCTTTAGCAAGGAAGTTGGCAAGGGTTGTTTGGAGTGT TTGGTATAATAATAGGCCTTATGAACCAAAGTGA
Upstream 100 bases:
>100_bases ATCTCCTCTGATAAGTTCTTTTATGAGTTGACTAGTATTTCCTATATAGGTTTTAATAGCTCTGGGGAGTATTACTCTAT ATCCCCAGGGCTGGGGAAAC
Downstream 100 bases:
>100_bases TTGAAGGTCCCTCCCCCGAATCGCCACGTGGGTTGAAAGGACCCACGTGGCAATGTTAGCTAATACTATGCTTGAAGTTT GACCGAAAGGTTTATTACTG
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MVESKTEAKSSEVGVTNPYRRTEHCGKIHACRCDKEVGVIGIDISKDHLITSRGRVRKYKNNKEGYEEILEMKPCTIVLE PTGVYAIRPSQYFKERGIKVLQVSPNVLSREKEFRGKKTDFYDAEKLENMVDKAKEYEYNPLRELVTLYLFLKDIEVKYK NRLKRALFLVSDNDRISKDRLERLAKGDFTQEELYNLEYTPIVLEEIKVLAKTLLEMQEKLKEVRRMIEEQVPDNHVLLT IPAIGRLAAGIIIGVVGDIRRFPKPESFVAYCGLDPLVERSGKAVISRGISKRGNKYLRSLFYFLAGRNYSRNPTLLKFY EAHKDRLQGKKLFTALARKLARVVWSVWYNNRPYEPK
Sequences:
>Translated_357_residues MVESKTEAKSSEVGVTNPYRRTEHCGKIHACRCDKEVGVIGIDISKDHLITSRGRVRKYKNNKEGYEEILEMKPCTIVLE PTGVYAIRPSQYFKERGIKVLQVSPNVLSREKEFRGKKTDFYDAEKLENMVDKAKEYEYNPLRELVTLYLFLKDIEVKYK NRLKRALFLVSDNDRISKDRLERLAKGDFTQEELYNLEYTPIVLEEIKVLAKTLLEMQEKLKEVRRMIEEQVPDNHVLLT IPAIGRLAAGIIIGVVGDIRRFPKPESFVAYCGLDPLVERSGKAVISRGISKRGNKYLRSLFYFLAGRNYSRNPTLLKFY EAHKDRLQGKKLFTALARKLARVVWSVWYNNRPYEPK >Mature_357_residues MVESKTEAKSSEVGVTNPYRRTEHCGKIHACRCDKEVGVIGIDISKDHLITSRGRVRKYKNNKEGYEEILEMKPCTIVLE PTGVYAIRPSQYFKERGIKVLQVSPNVLSREKEFRGKKTDFYDAEKLENMVDKAKEYEYNPLRELVTLYLFLKDIEVKYK NRLKRALFLVSDNDRISKDRLERLAKGDFTQEELYNLEYTPIVLEEIKVLAKTLLEMQEKLKEVRRMIEEQVPDNHVLLT IPAIGRLAAGIIIGVVGDIRRFPKPESFVAYCGLDPLVERSGKAVISRGISKRGNKYLRSLFYFLAGRNYSRNPTLLKFY EAHKDRLQGKKLFTALARKLARVVWSVWYNNRPYEPK
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 41521; Mature: 41521
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESKTEAKSSEVGVTNPYRRTEHCGKIHACRCDKEVGVIGIDISKDHLITSRGRVRKYK CCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEEEECCCCCEECCCCHHHHHC NNKEGYEEILEMKPCTIVLEPTGVYAIRPSQYFKERGIKVLQVSPNVLSREKEFRGKKTD CCHHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHCCCEEEEECCHHHHHHHHHCCCCCC FYDAEKLENMVDKAKEYEYNPLRELVTLYLFLKDIEVKYKNRLKRALFLVSDNDRISKDR CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH LERLAKGDFTQEELYNLEYTPIVLEEIKVLAKTLLEMQEKLKEVRRMIEEQVPDNHVLLT HHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE IPAIGRLAAGIIIGVVGDIRRFPKPESFVAYCGLDPLVERSGKAVISRGISKRGNKYLRS ECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHH LFYFLAGRNYSRNPTLLKFYEAHKDRLQGKKLFTALARKLARVVWSVWYNNRPYEPK HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVESKTEAKSSEVGVTNPYRRTEHCGKIHACRCDKEVGVIGIDISKDHLITSRGRVRKYK CCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEEEECCCCCEECCCCHHHHHC NNKEGYEEILEMKPCTIVLEPTGVYAIRPSQYFKERGIKVLQVSPNVLSREKEFRGKKTD CCHHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHCCCEEEEECCHHHHHHHHHCCCCCC FYDAEKLENMVDKAKEYEYNPLRELVTLYLFLKDIEVKYKNRLKRALFLVSDNDRISKDR CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH LERLAKGDFTQEELYNLEYTPIVLEEIKVLAKTLLEMQEKLKEVRRMIEEQVPDNHVLLT HHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE IPAIGRLAAGIIIGVVGDIRRFPKPESFVAYCGLDPLVERSGKAVISRGISKRGNKYLRS ECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHH LFYFLAGRNYSRNPTLLKFYEAHKDRLQGKKLFTALARKLARVVWSVWYNNRPYEPK HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7607411 [H]