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The map label for this gene is liaH [H]

Identifier: 227815717

GI number: 227815717

Start: 2860906

End: 2861568

Strand: Reverse

Name: liaH [H]

Synonym: BAMEG_3137

Alternate gene names: 227815717

Gene position: 2861568-2860906 (Counterclockwise)

Preceding gene: 227815718

Following gene: 227815716

Centisome position: 54.71

GC content: 34.39

Gene sequence:

>663_bases
ATGAAACAATCTTTATTCGGACGTGTACGCGATGCAATTTTAGCAGATTTTCATAATGTATTAGATGAGAAAGAAAGAAA
AAAACCAATTGCTATGTTAAACCAATATTTACGCGATAGTGAGCGTGAAATAACAAAAATTGAGAAGTTAATTCAGCGTC
ATAAAACATTAAAATCGAACTTTGCTCGTGAACTTGAGCAAGCTCGTTATTTCGTAAATAAAAGATCAAAGCAAGCGCTT
ATCGCTCAAGAAGCAGGCGAATTACAACTACATGAGCGTGCATTAGAAGAAGTAGCTTACTATGAAGGGCAAGTAACTCG
ATTAGAAGAAATGTATGCAGGTGTTGTAGAGCAAATTGATGAGTTAGAGCGTCGTCTTTCTGAAATGAAAAATAAATTAA
AAGAAATGCACGCAAAACGTATGGAATTAATGGCACGTGAAAATATGGCACATGCAAATCGTCGTATGAATACTGCGATG
CATAAAATGGATGAAAATAATCCATTCTTACGCTTTGAAGAAATTGAAGAGCATATTCGTGACTTAGAAACTCGTATGAA
TGATGAGCATGAACGTGACACATTTGATATGAAAATTGCAAAACTTGAGCGTGAAATGAAAGAAAAGAACGATGTATCGT
TAACGAAAGAGTTAACAAAATAA

Upstream 100 bases:

>100_bases
AACCATATAGCAACTTTGAAGATGAGTGGAACAAGTTAATGAAAAACTAATAAAAAATAAATCAAATCAAATTTATAAAG
TAGAAGAGAGGAAGATTATA

Downstream 100 bases:

>100_bases
TAGTAGTATATTATAAAACAGGCTTATGATATAGTGATAGGAGAAAAGGTGTTGGAAAGCAATGCCTTTTCTTCTATGTA
TATGTGACAAGAAGGGGGGA

Product: PspA/IM30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKQSLFGRVRDAILADFHNVLDEKERKKPIAMLNQYLRDSEREITKIEKLIQRHKTLKSNFARELEQARYFVNKRSKQAL
IAQEAGELQLHERALEEVAYYEGQVTRLEEMYAGVVEQIDELERRLSEMKNKLKEMHAKRMELMARENMAHANRRMNTAM
HKMDENNPFLRFEEIEEHIRDLETRMNDEHERDTFDMKIAKLEREMKEKNDVSLTKELTK

Sequences:

>Translated_220_residues
MKQSLFGRVRDAILADFHNVLDEKERKKPIAMLNQYLRDSEREITKIEKLIQRHKTLKSNFARELEQARYFVNKRSKQAL
IAQEAGELQLHERALEEVAYYEGQVTRLEEMYAGVVEQIDELERRLSEMKNKLKEMHAKRMELMARENMAHANRRMNTAM
HKMDENNPFLRFEEIEEHIRDLETRMNDEHERDTFDMKIAKLEREMKEKNDVSLTKELTK
>Mature_220_residues
MKQSLFGRVRDAILADFHNVLDEKERKKPIAMLNQYLRDSEREITKIEKLIQRHKTLKSNFARELEQARYFVNKRSKQAL
IAQEAGELQLHERALEEVAYYEGQVTRLEEMYAGVVEQIDELERRLSEMKNKLKEMHAKRMELMARENMAHANRRMNTAM
HKMDENNPFLRFEEIEEHIRDLETRMNDEHERDTFDMKIAKLEREMKEKNDVSLTKELTK

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 26481; Mature: 26481

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSLFGRVRDAILADFHNVLDEKERKKPIAMLNQYLRDSEREITKIEKLIQRHKTLKSN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FARELEQARYFVNKRSKQALIAQEAGELQLHERALEEVAYYEGQVTRLEEMYAGVVEQID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ELERRLSEMKNKLKEMHAKRMELMARENMAHANRRMNTAMHKMDENNPFLRFEEIEEHIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
DLETRMNDEHERDTFDMKIAKLEREMKEKNDVSLTKELTK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQSLFGRVRDAILADFHNVLDEKERKKPIAMLNQYLRDSEREITKIEKLIQRHKTLKSN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FARELEQARYFVNKRSKQALIAQEAGELQLHERALEEVAYYEGQVTRLEEMYAGVVEQID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ELERRLSEMKNKLKEMHAKRMELMARENMAHANRRMNTAMHKMDENNPFLRFEEIEEHIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
DLETRMNDEHERDTFDMKIAKLEREMKEKNDVSLTKELTK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]