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The map label for this gene is ypiA [H]

Identifier: 227815634

GI number: 227815634

Start: 2782379

End: 2783641

Strand: Reverse

Name: ypiA [H]

Synonym: BAMEG_3053

Alternate gene names: 227815634

Gene position: 2783641-2782379 (Counterclockwise)

Preceding gene: 227815635

Following gene: 227815633

Centisome position: 53.22

GC content: 34.44

Gene sequence:

>1263_bases
ATGCAAAAGTTTGAACAAGCTGTTTCATATATTGAAAATGGTGAAGCGGAAAAAGGATTACAATTGTTAAAAGAACAATT
AAAAATTGCGAATGATGAAGAGAAGTATGATATCGCTCGTTACTATCATACACTGGGATTTACGGATGAAGCGTTATCTA
TTACAGAAGACTTACGTTTATTGTATCCAGAAGAAAGTGAATTCACTGTATTTTTAGCAGAATTATATATTGATCTAGAC
AAAGAAGATGAAGCGATTGAAGTGCTTCATGATATTCCAGAAAATGATGATTTATATGTTCAATCGTTATTACTAGTTGC
GGATTTATTCCAAATGCAAGGTTTTGATGATGTAGCAGAACAAAAACTATTAAAGGCGAAAGAAATGATGCCTGACGAAC
CTGTCATTACGTTTGGATTAGCAGAGTTATATAGTAGTAAAGGTGAAGAACAAAAGGCAATCACTTATTATGAGTCGCTA
TTATCGGAACATAAAGTAATGGGTGGTGTTGTCATTGCACTACGCCTTGGAGAAACGTTAAGTGCGATTGGAAATTGGGA
AGAGGCGATTTCTTACTACGAAGCAGGTTTAGAAGAACAAAAAGATATCCACTCATTGTTTGGATATGCCTTCACATTAT
ATCAAGGTGAAGAATACCAAAGAGCAATTGGTGCTTGGCAAGAACTAAAAGAATTAGATCCTGAGTATGCATCTCTTTAC
ATGTATTTAGCGAAAAGCTATGAAAAAGAAGGAATGCTTCAAGAAAGCTATGAAACACTTCATGAAGGAATTAAAGTAGA
TGAACTTTCTGTACCATTTTATGTAGAATTAGCGAACATTGCAGCGAAATTAGGGAAAATAGCGGAAGCAGAGGAAGTGC
TTCAAAAAGCGCTTGAGTTAGATCCAGGACATTTAGGTGCAACATTAAAATATGCATATATCTTAAAGGAACAAGAAAAG
TATGAAGAGCTAATTGCCGTTGTAGAGCGTGCTATCGATAGTGGAGAACCAGATACACAACTACTTTGGGATCTTGCGTT
TGCAAAAAAACAATTAGAAATGTATTCTGATGCATTAAAACACTATGAAAGTGCATATACTTCTTTTAAGAATCATCCAG
ACTTCTTGGAAGAGTACGGTTATTTCTTATTGGAGGAAGGTATGCAAAAAGAGGCGAAAGAAGTATTTACTCAGTTAATA
CAACTAGACCCGACACAAATTCATATTGAAGAATTGTTATATAATTTAGAGGATTTTTCATAA

Upstream 100 bases:

>100_bases
TAAGAAGAAGCATGCACATTCTAAAGGTTGCGTTCTAACAATGAGTTGCTTATGATAAATGAACAGAAAAGAATATTTTT
TAGAATTAAAGGAGACGTTT

Downstream 100 bases:

>100_bases
GTTGGAAGGAAACTGAATACTGCTTCTTGAATCTAAAAAGAAAAGAGAAAGACAGAGGAGGGACTTAATTGCTATGAATA
CCCCTGTTTCTGTAAACGAG

Product: TPR domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MQKFEQAVSYIENGEAEKGLQLLKEQLKIANDEEKYDIARYYHTLGFTDEALSITEDLRLLYPEESEFTVFLAELYIDLD
KEDEAIEVLHDIPENDDLYVQSLLLVADLFQMQGFDDVAEQKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESL
LSEHKVMGGVVIALRLGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAWQELKELDPEYASLY
MYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIAEAEEVLQKALELDPGHLGATLKYAYILKEQEK
YEELIAVVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYTSFKNHPDFLEEYGYFLLEEGMQKEAKEVFTQLI
QLDPTQIHIEELLYNLEDFS

Sequences:

>Translated_420_residues
MQKFEQAVSYIENGEAEKGLQLLKEQLKIANDEEKYDIARYYHTLGFTDEALSITEDLRLLYPEESEFTVFLAELYIDLD
KEDEAIEVLHDIPENDDLYVQSLLLVADLFQMQGFDDVAEQKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESL
LSEHKVMGGVVIALRLGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAWQELKELDPEYASLY
MYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIAEAEEVLQKALELDPGHLGATLKYAYILKEQEK
YEELIAVVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYTSFKNHPDFLEEYGYFLLEEGMQKEAKEVFTQLI
QLDPTQIHIEELLYNLEDFS
>Mature_420_residues
MQKFEQAVSYIENGEAEKGLQLLKEQLKIANDEEKYDIARYYHTLGFTDEALSITEDLRLLYPEESEFTVFLAELYIDLD
KEDEAIEVLHDIPENDDLYVQSLLLVADLFQMQGFDDVAEQKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESL
LSEHKVMGGVVIALRLGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAWQELKELDPEYASLY
MYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIAEAEEVLQKALELDPGHLGATLKYAYILKEQEK
YEELIAVVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYTSFKNHPDFLEEYGYFLLEEGMQKEAKEVFTQLI
QLDPTQIHIEELLYNLEDFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=393, Percent_Identity=23.1552162849873, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI32307150, Length=393, Percent_Identity=23.1552162849873, Blast_Score=70, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=283, Percent_Identity=23.321554770318, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=399, Percent_Identity=24.3107769423559, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 48405; Mature: 48405

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFEQAVSYIENGEAEKGLQLLKEQLKIANDEEKYDIARYYHTLGFTDEALSITEDLRL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LYPEESEFTVFLAELYIDLDKEDEAIEVLHDIPENDDLYVQSLLLVADLFQMQGFDDVAE
CCCCCCCHHEEHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLSEHKVMGGVVIALRLGETL
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAWQELKELDPEYASLY
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
MYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIAEAEEVLQKALEL
HHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPGHLGATLKYAYILKEQEKYEELIAVVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HYESAYTSFKNHPDFLEEYGYFLLEEGMQKEAKEVFTQLIQLDPTQIHIEELLYNLEDFS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKFEQAVSYIENGEAEKGLQLLKEQLKIANDEEKYDIARYYHTLGFTDEALSITEDLRL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LYPEESEFTVFLAELYIDLDKEDEAIEVLHDIPENDDLYVQSLLLVADLFQMQGFDDVAE
CCCCCCCHHEEHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLSEHKVMGGVVIALRLGETL
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAWQELKELDPEYASLY
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
MYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIAEAEEVLQKALEL
HHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPGHLGATLKYAYILKEQEKYEELIAVVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HYESAYTSFKNHPDFLEEYGYFLLEEGMQKEAKEVFTQLIQLDPTQIHIEELLYNLEDFS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]