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The map label for this gene is ypmB [H]

Identifier: 227815609

GI number: 227815609

Start: 2761478

End: 2761981

Strand: Reverse

Name: ypmB [H]

Synonym: BAMEG_3028

Alternate gene names: 227815609

Gene position: 2761981-2761478 (Counterclockwise)

Preceding gene: 227815610

Following gene: 227815608

Centisome position: 52.81

GC content: 32.74

Gene sequence:

>504_bases
ATGAAAAAGTGGATCTTTACAATCATTATCGTAATCGTTGCTAGCGGAATATATGGGGCGTATGTTTATAATAAAGCAAT
GGAAAAGAAACTTCCTAAAGAGGCAAAATCTGTAGAAATTGCAAAAGAAAAAGCAAAGCTTACAAAAGTAAAATCTGTGG
ATTATTATAACGGAGAATCTTCATATACAGTCGTGCAAGGTACCGATGAAAATGGAGAACAACTTATCGTTTGGGTGCCT
GAGAAAAAAGGGGAAACAATAGTAAGGAAAAAGAGCGAAGGTATTTCTGAAAAAGATGCTTTACAAAGAACGATTGAACA
AGTCGGAGATGAAAGTAAAGAGCCCAAAAGTAAGCCTAAAGAAATTTTAAAAGTAAAATTAGGCGTTGAAAATAATATAC
CACTATGGGAAGTTACATATATTGATGATGACAATCGTTATAGTTACTACAATCTTGCATTTCAAGATGGTCAGTTTTTA
AAACGATATAGCATTGAAAAATAG

Upstream 100 bases:

>100_bases
AATCGTACGTTAAAAGAGCAGGACCTCATGTTCGGATTAGCATTAGACGAAAAAGATAAAGAAACAGCTGTATTTACGAT
TTACAGAACGTAGTGATAAA

Downstream 100 bases:

>100_bases
ATGTAGGGGGAACTACAAATGAAATTAGCAAAGCGAGTAGCTGCTTTAACACCATCTGCAACTTTAGAAATTACAGCAAA
GGCACAAGCATTAAAAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKWIFTIIIVIVASGIYGAYVYNKAMEKKLPKEAKSVEIAKEKAKLTKVKSVDYYNGESSYTVVQGTDENGEQLIVWVP
EKKGETIVRKKSEGISEKDALQRTIEQVGDESKEPKSKPKEILKVKLGVENNIPLWEVTYIDDDNRYSYYNLAFQDGQFL
KRYSIEK

Sequences:

>Translated_167_residues
MKKWIFTIIIVIVASGIYGAYVYNKAMEKKLPKEAKSVEIAKEKAKLTKVKSVDYYNGESSYTVVQGTDENGEQLIVWVP
EKKGETIVRKKSEGISEKDALQRTIEQVGDESKEPKSKPKEILKVKLGVENNIPLWEVTYIDDDNRYSYYNLAFQDGQFL
KRYSIEK
>Mature_167_residues
MKKWIFTIIIVIVASGIYGAYVYNKAMEKKLPKEAKSVEIAKEKAKLTKVKSVDYYNGESSYTVVQGTDENGEQLIVWVP
EKKGETIVRKKSEGISEKDALQRTIEQVGDESKEPKSKPKEILKVKLGVENNIPLWEVTYIDDDNRYSYYNLAFQDGQFL
KRYSIEK

Specific function: Unknown

COG id: COG5353

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015801
- InterPro:   IPR005075 [H]

Pfam domain/function: PF03413 PepSY [H]

EC number: NA

Molecular weight: Translated: 19210; Mature: 19210

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWIFTIIIVIVASGIYGAYVYNKAMEKKLPKEAKSVEIAKEKAKLTKVKSVDYYNGES
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCC
SYTVVQGTDENGEQLIVWVPEKKGETIVRKKSEGISEKDALQRTIEQVGDESKEPKSKPK
CEEEEECCCCCCCEEEEECCCCCCCEEEHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
EILKVKLGVENNIPLWEVTYIDDDNRYSYYNLAFQDGQFLKRYSIEK
HHEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHCCCCC
>Mature Secondary Structure
MKKWIFTIIIVIVASGIYGAYVYNKAMEKKLPKEAKSVEIAKEKAKLTKVKSVDYYNGES
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCC
SYTVVQGTDENGEQLIVWVPEKKGETIVRKKSEGISEKDALQRTIEQVGDESKEPKSKPK
CEEEEECCCCCCCEEEEECCCCCCCEEEHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
EILKVKLGVENNIPLWEVTYIDDDNRYSYYNLAFQDGQFLKRYSIEK
HHEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]