Click here to switch to the map view.

The map label for this gene is yshE [H]

Identifier: 227815573

GI number: 227815573

Start: 2728863

End: 2729249

Strand: Reverse

Name: yshE [H]

Synonym: BAMEG_2988

Alternate gene names: 227815573

Gene position: 2729249-2728863 (Counterclockwise)

Preceding gene: 227815574

Following gene: 227815572

Centisome position: 52.18

GC content: 35.14

Gene sequence:

>387_bases
ATGATTAATTTTTTATTATATTTAGCAGTAACACTTGGCCTTTTATGCATTGGTCTTCTCCTAATGGAAGTGACAACGAA
AGTAAAAGAATTTAAGCTAATGGCCCAAGGAAATAAGGCGGTAAGCTATGTACTTGGAGGGCGATTACTTGGTTTAGCTA
TTGTTTTATATTCGACAGCAGCTAATTCCATTTCACTTTTTGATATGGTTTCGTGGGGAGCGGTTGGGATTTTGGCTCAA
ATTATCGTCTTTTATTTAGCTGAGTGGCTTACACCACGCTTTAATATAAACAAAAGTCTTGAAGAAGATAATCAAGCAGT
CGGTCTTTTTCTTATGTTTTTATCGCTTTCAATTGGGATCGTAATTGCTGGTTGTATAACTTATTAA

Upstream 100 bases:

>100_bases
TTGCTGGAAAAGCGAGTAGTATCGGTATTCGTGCGGGGGAAAAAATTACGGGGAATGAATCGTACTATTTACCGGTAGGT
ATAAAAAAGGAGGAAAGTAT

Downstream 100 bases:

>100_bases
AAGCCTTACGTTTAAACGTAAGGTTTTTATTTTTACTAATTTTGAAATGGGTGCTTTATTCATTTGATGCGTCGAAAGAG
AAATAATATGTATATGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MINFLLYLAVTLGLLCIGLLLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLFDMVSWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY

Sequences:

>Translated_128_residues
MINFLLYLAVTLGLLCIGLLLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLFDMVSWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY
>Mature_128_residues
MINFLLYLAVTLGLLCIGLLLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLFDMVSWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family [H]

Homologues:

Organism=Escherichia coli, GI1790627, Length=125, Percent_Identity=29.6, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007140 [H]

Pfam domain/function: PF03994 DUF350 [H]

EC number: NA

Molecular weight: Translated: 13971; Mature: 13971

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFLLYLAVTLGLLCIGLLLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
ANSISLFDMVSWGAVGILAQIIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VIAGCITY
HHHHHHCC
>Mature Secondary Structure
MINFLLYLAVTLGLLCIGLLLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
ANSISLFDMVSWGAVGILAQIIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VIAGCITY
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]