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The map label for this gene is yjiA [H]

Identifier: 227815154

GI number: 227815154

Start: 2337451

End: 2338401

Strand: Reverse

Name: yjiA [H]

Synonym: BAMEG_2565

Alternate gene names: 227815154

Gene position: 2338401-2337451 (Counterclockwise)

Preceding gene: 227815156

Following gene: 227815152

Centisome position: 44.71

GC content: 33.86

Gene sequence:

>951_bases
ATGATTCCAGTAACAATATTAACTGGTTTTCTTGGATCTGGGAAAACAACATTATTAAATCGTATTTTAACAGAGAATCA
CGGTCAGAAATTAGCGGTGATCGTAAATGAAATAGGGAAAATTGGTATCGATAATCAGTTGATTATGAATGTTGAAGAAG
AAATTATGGAAATGACAAACGGTTGTTTATGCTGTACTGTGCGGGAAGATTTACTCGTTGCGTTAAAACAATTACTGGAT
GTAAAAGCAGAAGGTAAAATGGACTTTGATGGATTAGTAATTGAAACAACTGGTCTTGCAAATCCAGGTCCTATTATTCA
AACATTCTTTTTAGATCCTGTTATTCAATCTGCATACCAAATTAATGGTGTTGTAACAGTAGTAGATAGTTATCATATAC
ATAAACATTTTGAAAAAGGACTAGAAGCAAAAGAACAAATTGCATTTGCCGATGTTATATTAGTGAATAAGTTAGATTTA
ATTGAAGAGAGCGAAAAAGAAAACCTCTTACATGAACTGCAAGGAATAAACCCGACTGCAAAGTTAATTCAGTCGACTAA
CTGTGATGTGGATATTCCATCGTTACTAAAAATTCAAACGTTTAAAACGAAAGATACGTTACAAATTTATCCTCATAAAG
AGCATAATCATCTAGAAGGTGTAAAATCGTTTGTACTACGCGAAGAGCGTCCGCTAGATTTACAAAAACTGAATGAATGG
ATGTCAGCTGTCGTTCAAGAACTAGGTGAATATTTATATCGCTACAAAGGAATTTTATCAATTGATGGAGTAGATAAACG
CATCGTTTTCCAAGGTGTGCATACACTGTTTGCTGCATCATATGATAGAGAGTGGCAAGAGGGCGAAGAACGAGTAAGTG
AAGTTGTTTTCATCGGAAAAGATATTAATAAAGAATGGTTCCAAGAACATTTTGAGGAGTGTGTGAAATAA

Upstream 100 bases:

>100_bases
AGTTAGAGGGGCGTACAAACAATAAATATGTTTTGCTACAAAAACGATTATTTCTGTATGTTATAATGTAAAAACATATA
GCTATAAGGAGATGTACGAA

Downstream 100 bases:

>100_bases
GTCTGCGTTTACTGCAGGCTTATTTTTTGGACTTAACTAAGTGTTTTGTAGAAAAATGATAGATTGCAAAAAACGAAGGA
TAATAAAAAAGCCTGTTTTC

Product: cobalamin synthesis protein/P47K family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGKIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDL
IEESEKENLLHELQGINPTAKLIQSTNCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECVK

Sequences:

>Translated_316_residues
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGKIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDL
IEESEKENLLHELQGINPTAKLIQSTNCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECVK
>Mature_316_residues
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGKIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDL
IEESEKENLLHELQGINPTAKLIQSTNCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECVK

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI148727351, Length=343, Percent_Identity=33.8192419825073, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI33469141, Length=342, Percent_Identity=32.7485380116959, Blast_Score=175, Evalue=4e-44,
Organism=Homo sapiens, GI126722884, Length=343, Percent_Identity=33.5276967930029, Blast_Score=174, Evalue=7e-44,
Organism=Homo sapiens, GI146231952, Length=336, Percent_Identity=32.4404761904762, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI223941779, Length=332, Percent_Identity=32.8313253012048, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI223941776, Length=333, Percent_Identity=32.1321321321321, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI119120938, Length=320, Percent_Identity=31.875, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI310124603, Length=227, Percent_Identity=26.431718061674, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI310124599, Length=192, Percent_Identity=27.0833333333333, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87082430, Length=318, Percent_Identity=40.5660377358491, Blast_Score=214, Evalue=7e-57,
Organism=Escherichia coli, GI1788499, Length=193, Percent_Identity=32.1243523316062, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324356, Length=361, Percent_Identity=30.4709141274238, Blast_Score=126, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 35907; Mature: 35907

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGKIGIDNQLIMNVEEEIMEMTN
CCCHHEEHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQ
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
INGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDLIEESEKENLLHELQGINPTA
HCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KLIQSTNCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
HHHHCCCCCCCCCHHHEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEERVSEVVFIGK
HHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECC
DINKEWFQEHFEECVK
CCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGKIGIDNQLIMNVEEEIMEMTN
CCCHHEEHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQ
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
INGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDLIEESEKENLLHELQGINPTA
HCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KLIQSTNCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
HHHHCCCCCCCCCHHHEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEERVSEVVFIGK
HHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECC
DINKEWFQEHFEECVK
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]