Click here to switch to the map view.

The map label for this gene is dal2 [H]

Identifier: 227815101

GI number: 227815101

Start: 2291159

End: 2292334

Strand: Reverse

Name: dal2 [H]

Synonym: BAMEG_2512

Alternate gene names: 227815101

Gene position: 2292334-2291159 (Counterclockwise)

Preceding gene: 227815103

Following gene: 227815097

Centisome position: 43.83

GC content: 35.8

Gene sequence:

>1176_bases
ATGAGTTTGAAATATGGAAGAGATACAATTGTTGAAGTTGACTTAAATGCAGTAAAACATAATGTAAAAGAATTTAAAAA
ACGTGTGAATGATGAAAATATTGCAATGATGGCTGCTGTAAAAGCGAATGGGTATGGTCATGGGGCAGTTGAAGTTGCAA
AAGCTGCTATTGAAGCAGGAATAAATCAGCTTGCAATTGCATTTGTAGATGAAGCGATAGAGTTAAGAGAAGCAGGAATT
AACGTGCCGATTTTAATTTTAGGCTATACATCAGTAGCGGCTGCGGAAGAAGCAATTCAATATGACGTTATGATGACCGT
TTATAGAAGTGAAGATTTACAAGGTATAAATGAAATCGCAAACCGTCTTCAAAAGAAAGCGCAAATTCAGGTGAAAATTG
ATACAGGAATGAGTCGCATTGGTTTACAGGAAGAAGAGGTTAAACCATTTTTAGAGGAATTAAAACGTATGGAGTATGTA
GAGGTAGTGGGAATGTTTACACATTACTCTACGGCAGATGAAATCGATAAATCATATACGAATATGCAAACAAGTTTATT
TGAGAAAGCTGTCAATACAGCAAAAGAATTAGGAATTCATATTCCATATATTCATAGTTCAAATAGTGCAGGTTCAATGG
AACCTAGCAATACATTTCAAAATATGGTTCGTGTAGGTATCGGAATTTATGGAATGTATCCTTCAAAAGAGGTAAATCAT
TCAGTTGTTTCGTTACAGCCTGCGTTGTCGTTAAAATCAAAAGTAGCCCATATTAAGCATGCGAAGAAAAATCGCGGTGT
AAGTTATGGGAATACGTATGTAACGACTGGTGAAGAATGGATTGCCACCGTACCGATTGGTTATGCTGATGGTTATAATC
GTCAGTTGTCTAATAAAGGGCATGCATTAATAAATGGAGTTCGAGTACCTGTTATTGGCCGTGTTTGTATGGATCAGCTC
ATGTTAGACGTTTCAAAAGCAATGCCAGTACAAGTGGGAGACGAAGTAGTATTCTACGGTAAACAAGGCGAAGAAAACAT
CGCAGTAGAAGAAATAGCGGATATGTTAGGTACAATTAACTATGAAGTTACATGTATGTTAGATAGAAGAATTCCACGTG
TGTATAAAGAAAATAATGAAACAACTGCTGTTGTAAATATACTAAGAAAAAACTGA

Upstream 100 bases:

>100_bases
CTAGTAGTTTGACTAGCATATTGAAAAGTATTATATTGTAAAAGGTCATATGAAACGTGAAATAGAATGGAATGCAATTA
TTGAGTTAGGAGTTAGACCA

Downstream 100 bases:

>100_bases
ATCGTTATGATTCAGTTTTTTTATTTTTGACAAATAAAAAATGCCCTATTTGTACCGTGTGATTGAATGTCCTTAAAACC
TACGGATTCTAGCGAAGAAA

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVDEAIELREAGI
NVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYV
EVVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNH
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQL
MLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAVVNILRKN

Sequences:

>Translated_391_residues
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVDEAIELREAGI
NVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYV
EVVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNH
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQL
MLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAVVNILRKN
>Mature_390_residues
SLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVDEAIELREAGIN
VPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVE
VVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHS
VVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQLM
LDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAVVNILRKN

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1790487, Length=370, Percent_Identity=30, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787439, Length=370, Percent_Identity=30, Blast_Score=155, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 43372; Mature: 43241

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHC
INQLAIAFVDEAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIA
HHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHEEECCHHHHHHHHHH
NRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYT
HHHHHHCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNH
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCC
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKG
HHEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCHHCCCC
HALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTIN
CEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCHHHHHHHHHCCC
YEVTCMLDRRIPRVYKENNETTAVVNILRKN
EEEEEEECCCCCHHHHCCCCCEEEHHEECCC
>Mature Secondary Structure 
SLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAG
CCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHC
INQLAIAFVDEAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIA
HHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHEEECCHHHHHHHHHH
NRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYT
HHHHHHCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNH
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCC
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKG
HHEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCHHCCCC
HALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTIN
CEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCHHHHHHHHHCCC
YEVTCMLDRRIPRVYKENNETTAVVNILRKN
EEEEEEECCCCCHHHHCCCCCEEEHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA