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The map label for this gene is ykoG [H]

Identifier: 227814973

GI number: 227814973

Start: 2173073

End: 2173756

Strand: Reverse

Name: ykoG [H]

Synonym: BAMEG_2384

Alternate gene names: 227814973

Gene position: 2173756-2173073 (Counterclockwise)

Preceding gene: 227814974

Following gene: 227814972

Centisome position: 41.56

GC content: 32.75

Gene sequence:

>684_bases
ATGGGAGAAAGAATTTTAATCGTTGAGGATGAAGAAAAAATTGCTCGTGTCGTGCAGTTAGAATTAGAATTTGAAGGATA
TGAAAGTGAAATTGCAAAAACAGGTACAGAGGCAATGGAAAAGTTCGGAAATGGTAATTGGGATTTAATATTACTTGATG
TAATGCTTCCAAATATAAGTGGGTTAGAAGTTCTTCGAAGAATACGTTTGAAAAATGCTGTAATACCTATTATTTTATTA
ACTGCTCGTGATTCAGTTGTTGACAAGGTTAGTGGTTTAGATCAAGGAGCAAGTGACTATATCACAAAGCCTTTTCAAAT
AGAAGAATTATTAGCGAGAATTCGTGCTTGTTTAAGAATTTCAAATGTAGTAAAAGAAGAGGAAAATAGTAGTTATCAAA
TTGCAGATTTATATTTAGATGAGAAAACGAGAGAAGTGAAAAGAGGGAATAGTCTAATCGACTTAACACCACGTGAGTTT
GATTTATTACTATTTTTAATGAAGCATGAAAATCAAGTGTTAAACCGTGAGCAAATTGTAACGAATGTTTGGGGATTTGA
TTATTATGGCGATACAAATGTTGTTGACGTATATATTCGATATTTGCGCAAAAAAGTAGATTGTAATGTGGACGTACCAC
TTATTCACACTGTTAGAGGTGTTGGGTATGTCTTAAAGGTGTAA

Upstream 100 bases:

>100_bases
TTTTTCATTAAGGATAAAACATATTGGGTATTTTTTCTTTTGAAGGAAAGTATTACTTGTTATACTAAAATGGTGCAAAT
ATATATTATAGGAGGCTTTT

Downstream 100 bases:

>100_bases
CATATGAAAATTAAAAATAAAATATATTTATTCTCTACAGTATGGTTACTACTTATTTTATTAATTATTAATAGTTCAAT
ATATTTTTTGTTTTATAAAG

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MGERILIVEDEEKIARVVQLELEFEGYESEIAKTGTEAMEKFGNGNWDLILLDVMLPNISGLEVLRRIRLKNAVIPIILL
TARDSVVDKVSGLDQGASDYITKPFQIEELLARIRACLRISNVVKEEENSSYQIADLYLDEKTREVKRGNSLIDLTPREF
DLLLFLMKHENQVLNREQIVTNVWGFDYYGDTNVVDVYIRYLRKKVDCNVDVPLIHTVRGVGYVLKV

Sequences:

>Translated_227_residues
MGERILIVEDEEKIARVVQLELEFEGYESEIAKTGTEAMEKFGNGNWDLILLDVMLPNISGLEVLRRIRLKNAVIPIILL
TARDSVVDKVSGLDQGASDYITKPFQIEELLARIRACLRISNVVKEEENSSYQIADLYLDEKTREVKRGNSLIDLTPREF
DLLLFLMKHENQVLNREQIVTNVWGFDYYGDTNVVDVYIRYLRKKVDCNVDVPLIHTVRGVGYVLKV
>Mature_226_residues
GERILIVEDEEKIARVVQLELEFEGYESEIAKTGTEAMEKFGNGNWDLILLDVMLPNISGLEVLRRIRLKNAVIPIILLT
ARDSVVDKVSGLDQGASDYITKPFQIEELLARIRACLRISNVVKEEENSSYQIADLYLDEKTREVKRGNSLIDLTPREFD
LLLFLMKHENQVLNREQIVTNVWGFDYYGDTNVVDVYIRYLRKKVDCNVDVPLIHTVRGVGYVLKV

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=41.9642857142857, Blast_Score=181, Evalue=3e-47,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=40.4545454545455, Blast_Score=160, Evalue=6e-41,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=40.2654867256637, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=39.6396396396396, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1786911, Length=220, Percent_Identity=35.4545454545455, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=36.2445414847162, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=31.981981981982, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=33.0396475770925, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=34.6846846846847, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=35.0877192982456, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=29.9107142857143, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=31.304347826087, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=34.5132743362832, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=31.6017316017316, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788550, Length=123, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1790299, Length=130, Percent_Identity=28.4615384615385, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790437, Length=123, Percent_Identity=31.7073170731707, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787487, Length=150, Percent_Identity=28.6666666666667, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994928, Length=150, Percent_Identity=32, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788521, Length=210, Percent_Identity=30.4761904761905, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=31.6239316239316, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26090; Mature: 25959

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERILIVEDEEKIARVVQLELEFEGYESEIAKTGTEAMEKFGNGNWDLILLDVMLPNIS
CCCEEEEEECHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
GLEVLRRIRLKNAVIPIILLTARDSVVDKVSGLDQGASDYITKPFQIEELLARIRACLRI
HHHHHHHHHHHCCEEEEEEEECCHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHH
SNVVKEEENSSYQIADLYLDEKTREVKRGNSLIDLTPREFDLLLFLMKHENQVLNREQIV
HHHHHHCCCCCEEEEEEEECHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHH
TNVWGFDYYGDTNVVDVYIRYLRKKVDCNVDVPLIHTVRGVGYVLKV
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEC
>Mature Secondary Structure 
GERILIVEDEEKIARVVQLELEFEGYESEIAKTGTEAMEKFGNGNWDLILLDVMLPNIS
CCEEEEEECHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
GLEVLRRIRLKNAVIPIILLTARDSVVDKVSGLDQGASDYITKPFQIEELLARIRACLRI
HHHHHHHHHHHCCEEEEEEEECCHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHH
SNVVKEEENSSYQIADLYLDEKTREVKRGNSLIDLTPREFDLLLFLMKHENQVLNREQIV
HHHHHHCCCCCEEEEEEEECHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHH
TNVWGFDYYGDTNVVDVYIRYLRKKVDCNVDVPLIHTVRGVGYVLKV
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]