Definition | Bacillus anthracis str. CDC 684, complete genome. |
---|---|
Accession | NC_012581 |
Length | 5,230,115 |
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The map label for this gene is ythP [H]
Identifier: 227814956
GI number: 227814956
Start: 2158493
End: 2159203
Strand: Reverse
Name: ythP [H]
Synonym: BAMEG_2367
Alternate gene names: 227814956
Gene position: 2159203-2158493 (Counterclockwise)
Preceding gene: 227814960
Following gene: 227814955
Centisome position: 41.28
GC content: 34.88
Gene sequence:
>711_bases ATGTTAGAAGTAAATATCCGCTCTGCTGGATATGAAATAGGTGAAAAAACAATTCATGATATCGCTTTTTCTATTGAAAA AGGTGAATTAGTTGCTCTTATTGGCGCAAATGGTGCCGGAAAAAGTACGACGATTAAAACAATGCTAGGGTTGCTTGTAA ATGTGAATGGTGAAATATCATTTGGTGCAAAGAAAAATCCGTATGCATACGTACCAGAACATCCAACTTATTATGATTAT TTGACGCTCTGGGAACATATTGAATTATTAATGGCTGCCCGAGGAAACGAAGTAGGAAGCTGGGAAAGGAAAGCGGAAGA GTTATTACATCTGTTTCGAATGGATAAGTATAAACATGAGTATTTATCAAAGTTTTCTAAAGGTATGAAACAAAAATCGA TGCTTATATTAGCGTTTTTAACAGAAGCAGATTTTTATATTATTGACGAACCTTTTATCGGACTAGATCCAGTGGCTACG AAAGAGTTTTTAAGTTATTTATATAAAGAAAAAGAACGCGGGGCAGGAATTTTACTTTGTACGCACGTATTAGATACAGC TGAAAGAATTTGTGAAAGATTTTTACTCATCTCACAAGGTACATTAGTCGCAGATGGCCATTTAGATGCAATTCAAACGT TAGCAGAAATGCCAGGAAGTTCATTATTAGATTGTTTTGATGTAATCGTAAGGCGTGAACAGCATGATTAA
Upstream 100 bases:
>100_bases TTTTTTCCTGCTAGGAAAGTAAATATTTTATAATGATATATAGATAGTTATATGTTATTCTTTTCCTTGTTTGTATTGGA AATGGAAAGAAGGGGAATGT
Downstream 100 bases:
>100_bases AAAACAATTTTATAAAAGATTACGCCATGAACTAGGGCGGAAATGGAAGTCTATCCGGTCGGTAACAGATTGGACAGTCG CATTATATATTATTATTCCA
Product: ABC transporter, ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MLEVNIRSAGYEIGEKTIHDIAFSIEKGELVALIGANGAGKSTTIKTMLGLLVNVNGEISFGAKKNPYAYVPEHPTYYDY LTLWEHIELLMAARGNEVGSWERKAEELLHLFRMDKYKHEYLSKFSKGMKQKSMLILAFLTEADFYIIDEPFIGLDPVAT KEFLSYLYKEKERGAGILLCTHVLDTAERICERFLLISQGTLVADGHLDAIQTLAEMPGSSLLDCFDVIVRREQHD
Sequences:
>Translated_236_residues MLEVNIRSAGYEIGEKTIHDIAFSIEKGELVALIGANGAGKSTTIKTMLGLLVNVNGEISFGAKKNPYAYVPEHPTYYDY LTLWEHIELLMAARGNEVGSWERKAEELLHLFRMDKYKHEYLSKFSKGMKQKSMLILAFLTEADFYIIDEPFIGLDPVAT KEFLSYLYKEKERGAGILLCTHVLDTAERICERFLLISQGTLVADGHLDAIQTLAEMPGSSLLDCFDVIVRREQHD >Mature_236_residues MLEVNIRSAGYEIGEKTIHDIAFSIEKGELVALIGANGAGKSTTIKTMLGLLVNVNGEISFGAKKNPYAYVPEHPTYYDY LTLWEHIELLMAARGNEVGSWERKAEELLHLFRMDKYKHEYLSKFSKGMKQKSMLILAFLTEADFYIIDEPFIGLDPVAT KEFLSYLYKEKERGAGILLCTHVLDTAERICERFLLISQGTLVADGHLDAIQTLAEMPGSSLLDCFDVIVRREQHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=210, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI27436953, Length=201, Percent_Identity=27.363184079602, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI27477115, Length=203, Percent_Identity=27.5862068965517, Blast_Score=94, Evalue=8e-20, Organism=Homo sapiens, GI6005701, Length=203, Percent_Identity=27.5862068965517, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI27262624, Length=206, Percent_Identity=26.2135922330097, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI27262626, Length=206, Percent_Identity=26.2135922330097, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI105990541, Length=202, Percent_Identity=27.2277227722772, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI31657092, Length=209, Percent_Identity=26.7942583732057, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI47078218, Length=199, Percent_Identity=27.6381909547739, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI45446740, Length=199, Percent_Identity=27.1356783919598, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI116734710, Length=213, Percent_Identity=26.7605633802817, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI27881501, Length=206, Percent_Identity=24.7572815533981, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI30795238, Length=206, Percent_Identity=24.7572815533981, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI21536376, Length=207, Percent_Identity=28.5024154589372, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI150417984, Length=189, Percent_Identity=26.984126984127, Blast_Score=78, Evalue=9e-15, Organism=Escherichia coli, GI87081782, Length=218, Percent_Identity=27.9816513761468, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789593, Length=205, Percent_Identity=24.390243902439, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786319, Length=219, Percent_Identity=27.8538812785388, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI48994943, Length=219, Percent_Identity=29.2237442922374, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=26.7857142857143, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=25.5, Blast_Score=80, Evalue=8e-17, Organism=Escherichia coli, GI48995001, Length=209, Percent_Identity=26.7942583732057, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI87082268, Length=208, Percent_Identity=25.4807692307692, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1789032, Length=220, Percent_Identity=25.9090909090909, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1790544, Length=220, Percent_Identity=26.3636363636364, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788450, Length=211, Percent_Identity=24.6445497630332, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786398, Length=234, Percent_Identity=26.4957264957265, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1790739, Length=218, Percent_Identity=22.9357798165138, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786253, Length=194, Percent_Identity=22.680412371134, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI48994883, Length=222, Percent_Identity=26.1261261261261, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=23.5576923076923, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788506, Length=218, Percent_Identity=26.1467889908257, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786345, Length=218, Percent_Identity=23.8532110091743, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789672, Length=208, Percent_Identity=24.0384615384615, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788225, Length=225, Percent_Identity=22.6666666666667, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787792, Length=213, Percent_Identity=24.4131455399061, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI48994997, Length=242, Percent_Identity=25.2066115702479, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1786703, Length=197, Percent_Identity=25.8883248730964, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=24.2718446601942, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787105, Length=213, Percent_Identity=23.4741784037559, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1786872, Length=189, Percent_Identity=25.3968253968254, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=25.6281407035176, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71983523, Length=202, Percent_Identity=30.1980198019802, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI71983516, Length=202, Percent_Identity=30.1980198019802, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI71983510, Length=202, Percent_Identity=30.1980198019802, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17510237, Length=206, Percent_Identity=30.0970873786408, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI115533608, Length=207, Percent_Identity=28.5024154589372, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17565586, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24666092, Length=221, Percent_Identity=23.9819004524887, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24643674, Length=198, Percent_Identity=25.2525252525253, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI28574150, Length=193, Percent_Identity=26.4248704663212, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI116007328, Length=193, Percent_Identity=26.4248704663212, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24648314, Length=222, Percent_Identity=26.5765765765766, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571209, Length=175, Percent_Identity=26.2857142857143, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007184, Length=218, Percent_Identity=25.2293577981651, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI221500365, Length=218, Percent_Identity=25.2293577981651, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI221512771, Length=208, Percent_Identity=25, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26656; Mature: 26656
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00867 CPSASE_2 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEVNIRSAGYEIGEKTIHDIAFSIEKGELVALIGANGAGKSTTIKTMLGLLVNVNGEIS CEEEEECCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEE FGAKKNPYAYVPEHPTYYDYLTLWEHIELLMAARGNEVGSWERKAEELLHLFRMDKYKHE ECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YLSKFSKGMKQKSMLILAFLTEADFYIIDEPFIGLDPVATKEFLSYLYKEKERGAGILLC HHHHHHHCHHHHHHEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEHH THVLDTAERICERFLLISQGTLVADGHLDAIQTLAEMPGSSLLDCFDVIVRREQHD HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLEVNIRSAGYEIGEKTIHDIAFSIEKGELVALIGANGAGKSTTIKTMLGLLVNVNGEIS CEEEEECCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEE FGAKKNPYAYVPEHPTYYDYLTLWEHIELLMAARGNEVGSWERKAEELLHLFRMDKYKHE ECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YLSKFSKGMKQKSMLILAFLTEADFYIIDEPFIGLDPVATKEFLSYLYKEKERGAGILLC HHHHHHHCHHHHHHEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEHH THVLDTAERICERFLLISQGTLVADGHLDAIQTLAEMPGSSLLDCFDVIVRREQHD HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]