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The map label for this gene is arcD [H]

Identifier: 227814901

GI number: 227814901

Start: 2110311

End: 2111738

Strand: Reverse

Name: arcD [H]

Synonym: BAMEG_2312

Alternate gene names: 227814901

Gene position: 2111738-2110311 (Counterclockwise)

Preceding gene: 227814902

Following gene: 227814900

Centisome position: 40.38

GC content: 36.27

Gene sequence:

>1428_bases
ATGACAGATGGGGTGGTACAAATAGAAAAGAAGTTAGGATTTTTTCCATTAATTGCATTAGTAGTCGGAACAATGGTTGG
TGGCGGTGTTTTTAGTTTACCGCATGATTTAGCAGTAGGAGCAAATAGTGGCTCTATCATAATTGGCTGGTGTATTACAG
CGATGGGAATGATTCCACTCGCGCTCGTATATCAAACGTTAGCAAGAAAGAAACCAGAGCTTGAGGGCGGGATTTATAGT
TATGCACGTGCTGGTTTCGGTGAATATATTGGATTTAACAGTGCTTGGGGATACTGGTTAGCAGGAATTTTAGGAAACGT
TGCAACAATCATGTTACTGTTTAGTACATTAGGTTATTTCTTCCCAATTTTTAAGGGCGGAAATAGTGTTGCGTCTATCG
TAGGAGCATCACTTTTATTATGGACACTTCATTTTCTAATTTTATTTGGCATTCGTGAAGCATCTATTATGAATGTGATT
GCAACGATAGGAAAATTGGTTCCAATCGTATTATTTATTGTTGTAATGGTAACAGCGTTTCGCTGGGATACATTTACACA
GGATTTTTGGGGGGAAGGAACTATTTCAGTTTCCTCTATACTAGGTCAAGTGAAAAATACAATGCTTGTAACTCTTTGGG
TTTTCATCGGGGTTGAAGGAGCGGTAGTATTATCTGGAAGAGCAAAAAATAGTCGAGATGTCGGGAAAGCGACAGTATTA
GGACTTATTTTAGTAATGTCTATTTATATTTTAATTTCTGTCTTGTCAATGGGAGCGATGACAAGAGGAGAACTTTCTGT
TTTAGAAACTCCGTCAATGGGACATGTATTAGAACATGTTGTTGGGACATGGGGGGCAGTTGCGATAAACATCGGGTTAG
TTGCTTCACTTGTAGGTACATTAATAGGCTGGTTTTTACTTGTTTCTGAAATTTCCCACGTAGCAGGAAAAGATGGCGTG
TTTCCGAAAGTCTTTACGAAAACAAATAAAAAACAAACGCCGCATATGGCATTATGGATCTCAAATGGCGTTGCCCAAGT
TATATTTATAATCGTTCTGTTTTCAGAATCAACATATCAAATTATGTATTTCATAGCGTCAACATCAATTTTAGTACCAT
ATTTATTATCAGCGTTATTCCAATTTAAATTAGTAATTACAAATGAACTAAAAGATGCAAAAGTCAAAAATGGTTCGCTA
GCTTTAATTGCTTCACTTTACTCTGTATGGCTTATTTATGCAGCTGGTTTGAAGAATTTATTGCTCGTTTCAATCGTATA
CGGGATTGGAATCATTGTTTATGTGTATGCAAGAAAAGAAAAAGGAAATCGTTGTTTTACTGGTATAGAGAGATATGTAA
TGTGGGCAATTGTAGTAGCAGCTGTTACATCTCTATATATGTTATTGACTGGAAATATAAAAATGTAA

Upstream 100 bases:

>100_bases
TTTTCTTTTAGAATAAGTAATGTTTTCCTGAAAAAATATAAGAGAAGCGTCTATTAGAGAAAAAGGTGACTTTAATAGTT
GAACGAACATAACACCTAGA

Downstream 100 bases:

>100_bases
AAGTCCTTTTCATTTAAAGGGCTTTTTTCTTTGTCTATAGAATATTTAATACATAAGATATTCAGGAGGGATGAAAATGG
AAGGAAAAGAACAGTTGACG

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MTDGVVQIEKKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGSIIIGWCITAMGMIPLALVYQTLARKKPELEGGIYS
YARAGFGEYIGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNSVASIVGASLLLWTLHFLILFGIREASIMNVI
ATIGKLVPIVLFIVVMVTAFRWDTFTQDFWGEGTISVSSILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVL
GLILVMSIYILISVLSMGAMTRGELSVLETPSMGHVLEHVVGTWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGV
FPKVFTKTNKKQTPHMALWISNGVAQVIFIIVLFSESTYQIMYFIASTSILVPYLLSALFQFKLVITNELKDAKVKNGSL
ALIASLYSVWLIYAAGLKNLLLVSIVYGIGIIVYVYARKEKGNRCFTGIERYVMWAIVVAAVTSLYMLLTGNIKM

Sequences:

>Translated_475_residues
MTDGVVQIEKKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGSIIIGWCITAMGMIPLALVYQTLARKKPELEGGIYS
YARAGFGEYIGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNSVASIVGASLLLWTLHFLILFGIREASIMNVI
ATIGKLVPIVLFIVVMVTAFRWDTFTQDFWGEGTISVSSILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVL
GLILVMSIYILISVLSMGAMTRGELSVLETPSMGHVLEHVVGTWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGV
FPKVFTKTNKKQTPHMALWISNGVAQVIFIIVLFSESTYQIMYFIASTSILVPYLLSALFQFKLVITNELKDAKVKNGSL
ALIASLYSVWLIYAAGLKNLLLVSIVYGIGIIVYVYARKEKGNRCFTGIERYVMWAIVVAAVTSLYMLLTGNIKM
>Mature_474_residues
TDGVVQIEKKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGSIIIGWCITAMGMIPLALVYQTLARKKPELEGGIYSY
ARAGFGEYIGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNSVASIVGASLLLWTLHFLILFGIREASIMNVIA
TIGKLVPIVLFIVVMVTAFRWDTFTQDFWGEGTISVSSILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVLG
LILVMSIYILISVLSMGAMTRGELSVLETPSMGHVLEHVVGTWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVF
PKVFTKTNKKQTPHMALWISNGVAQVIFIIVLFSESTYQIMYFIASTSILVPYLLSALFQFKLVITNELKDAKVKNGSLA
LIASLYSVWLIYAAGLKNLLLVSIVYGIGIIVYVYARKEKGNRCFTGIERYVMWAIVVAAVTSLYMLLTGNIKM

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=467, Percent_Identity=41.541755888651, Blast_Score=370, Evalue=1e-103,
Organism=Escherichia coli, GI2367353, Length=419, Percent_Identity=31.5035799522673, Blast_Score=178, Evalue=8e-46,
Organism=Escherichia coli, GI1790575, Length=331, Percent_Identity=28.7009063444109, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1786908, Length=452, Percent_Identity=26.7699115044248, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87082250, Length=372, Percent_Identity=23.6559139784946, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004754
- InterPro:   IPR022461 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51420; Mature: 51289

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDGVVQIEKKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGSIIIGWCITAMGMIPL
CCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCHHEECCCCCCEEHHHHHHHHHHHHH
ALVYQTLARKKPELEGGIYSYARAGFGEYIGFNSAWGYWLAGILGNVATIMLLFSTLGYF
HHHHHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FPIFKGGNSVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPIVLFIVVMVTAF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWDTFTQDFWGEGTISVSSILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVL
HCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
GLILVMSIYILISVLSMGAMTRGELSVLETPSMGHVLEHVVGTWGAVAINIGLVASLVGT
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LIGWFLLVSEISHVAGKDGVFPKVFTKTNKKQTPHMALWISNGVAQVIFIIVLFSESTYQ
HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHH
IMYFIASTSILVPYLLSALFQFKLVITNELKDAKVKNGSLALIASLYSVWLIYAAGLKNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLVSIVYGIGIIVYVYARKEKGNRCFTGIERYVMWAIVVAAVTSLYMLLTGNIKM
HHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDGVVQIEKKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGSIIIGWCITAMGMIPL
CCCHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCHHEECCCCCCEEHHHHHHHHHHHHH
ALVYQTLARKKPELEGGIYSYARAGFGEYIGFNSAWGYWLAGILGNVATIMLLFSTLGYF
HHHHHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FPIFKGGNSVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPIVLFIVVMVTAF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWDTFTQDFWGEGTISVSSILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVL
HCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
GLILVMSIYILISVLSMGAMTRGELSVLETPSMGHVLEHVVGTWGAVAINIGLVASLVGT
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LIGWFLLVSEISHVAGKDGVFPKVFTKTNKKQTPHMALWISNGVAQVIFIIVLFSESTYQ
HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHH
IMYFIASTSILVPYLLSALFQFKLVITNELKDAKVKNGSLALIASLYSVWLIYAAGLKNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLVSIVYGIGIIVYVYARKEKGNRCFTGIERYVMWAIVVAAVTSLYMLLTGNIKM
HHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9053381; 11792842 [H]