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The map label for this gene is yjfR [C]

Identifier: 227814498

GI number: 227814498

Start: 1734455

End: 1735417

Strand: Direct

Name: yjfR [C]

Synonym: BAMEG_1906

Alternate gene names: 227814498

Gene position: 1734455-1735417 (Clockwise)

Preceding gene: 227814494

Following gene: 227814515

Centisome position: 33.16

GC content: 34.27

Gene sequence:

>963_bases
ATGAAAAAGAAATTTATAAATCAAATTCATACTGATGTAAGTTTTAAACCGAAAGATATTATAGGTTTAATGACTGATTA
CTTAAAAACGAAGACAAAGCTACGTCCTATAAAGAATTTACCGATTGTTTTATCAAATAAAGATAATGAATCTTTAGAGA
GTTTGACATGGTTTGGCCATTCTGCTTCTCTTTTAAAAATAGAAGGTAAAAAATTGTTATTAGACCCGATGTTTGGAGAT
ACCTCTTCCCCGTTTCCTCTGTTTAATAGTAAACGTTATAGCGGTACCTTTTCTTTAGAACGTGAAGACCTTCAAGAAAT
TGATGCGATTATCATTTCTCATAATCACTATGATCATTTAAATTATAAAAGTATTATGCAGTTAAAAGATCGCACAAAGC
ACTTTTATGTTCCAACTGGAGTTGCACAATATCTTATTAAATGGGGTATTTCACCTAGTAAAATTAGTGAGCATAATTGG
TGGGACGAAATTGCGTTTGATAATATTAAGTTAGTATGTACTCCTGCAAGGCATTTCTCTGGACGAGGTATGACAGATAG
AGATTGTTCATTATGGTGTTCATGGCTTATTCTTGGTCAAGAGACTAAAATTTTCTTTAGTGGTGATAGCGGTTATGCCC
CTCACTTTAAGGAAATTGGTGATAAATATGGTCCATTCGATCTTACATTGATGGAATGCGGGCAATATGATCCAAGGTGG
TCTGCAATTCATATGTTACCTGAAGAAACAGTACAAGCTCATATTGATGTAAAAGGAGAATTACTTCTTCCGATTCATTG
GGGTGCTTTTACATTAGCATTACACGAATGGAGTGACCCAATAGAACGTGTTACGAAGGAAGCGAACCGTTTAGGAGTTA
AAATTACAACACCTCAAATTGGCGAATCTATTACGTTAAAATCTACAGACTATCCTAGGTATGCTTGGTGGCAAAAAGTC
TAA

Upstream 100 bases:

>100_bases
ATGTACTGTATTTAAGGTGAAAGGTAAAATGATTTCGTTTAAACTACAGATAGCTACAATAACAACATACGTATAGTGTT
AAACGTAAAAAGGAGAACGA

Downstream 100 bases:

>100_bases
TTATAATAAAAAGCGAATCTGTCTTATATAAAAGATTCGCTTTTTACTTATTGATTATAATGTATCGTTGACAAACTGAT
TAAACTTGTCTATTTCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKKKFINQIHTDVSFKPKDIIGLMTDYLKTKTKLRPIKNLPIVLSNKDNESLESLTWFGHSASLLKIEGKKLLLDPMFGD
TSSPFPLFNSKRYSGTFSLEREDLQEIDAIIISHNHYDHLNYKSIMQLKDRTKHFYVPTGVAQYLIKWGISPSKISEHNW
WDEIAFDNIKLVCTPARHFSGRGMTDRDCSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQIGESITLKSTDYPRYAWWQKV

Sequences:

>Translated_320_residues
MKKKFINQIHTDVSFKPKDIIGLMTDYLKTKTKLRPIKNLPIVLSNKDNESLESLTWFGHSASLLKIEGKKLLLDPMFGD
TSSPFPLFNSKRYSGTFSLEREDLQEIDAIIISHNHYDHLNYKSIMQLKDRTKHFYVPTGVAQYLIKWGISPSKISEHNW
WDEIAFDNIKLVCTPARHFSGRGMTDRDCSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQIGESITLKSTDYPRYAWWQKV
>Mature_320_residues
MKKKFINQIHTDVSFKPKDIIGLMTDYLKTKTKLRPIKNLPIVLSNKDNESLESLTWFGHSASLLKIEGKKLLLDPMFGD
TSSPFPLFNSKRYSGTFSLEREDLQEIDAIIISHNHYDHLNYKSIMQLKDRTKHFYVPTGVAQYLIKWGISPSKISEHNW
WDEIAFDNIKLVCTPARHFSGRGMTDRDCSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQIGESITLKSTDYPRYAWWQKV

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=267, Percent_Identity=35.9550561797753, Blast_Score=177, Evalue=8e-45,
Organism=Homo sapiens, GI170932481, Length=267, Percent_Identity=35.9550561797753, Blast_Score=177, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI17543100, Length=255, Percent_Identity=32.5490196078431, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17543102, Length=255, Percent_Identity=32.5490196078431, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI25148824, Length=255, Percent_Identity=32.5490196078431, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17543104, Length=254, Percent_Identity=32.2834645669291, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6325154, Length=260, Percent_Identity=30.3846153846154, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36980; Mature: 36980

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFINQIHTDVSFKPKDIIGLMTDYLKTKTKLRPIKNLPIVLSNKDNESLESLTWFGH
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHEEECCC
SASLLKIEGKKLLLDPMFGDTSSPFPLFNSKRYSGTFSLEREDLQEIDAIIISHNHYDHL
CCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHEEEEECCCCCCC
NYKSIMQLKDRTKHFYVPTGVAQYLIKWGISPSKISEHNWWDEIAFDNIKLVCTPARHFS
CHHHHHHHHHCCCEEEECHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCEEEEEECCHHCC
GRGMTDRDCSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
CCCCCCCCHHHEEEEEEECCCEEEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCC
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQI
EEEEECCHHHHEEEEEECCCEEEEEECCEEEEEEHHCCCHHHHHHHHHHHCEEEEECCCC
GESITLKSTDYPRYAWWQKV
CCEEEEECCCCCCCHHCCCC
>Mature Secondary Structure
MKKKFINQIHTDVSFKPKDIIGLMTDYLKTKTKLRPIKNLPIVLSNKDNESLESLTWFGH
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHEEECCC
SASLLKIEGKKLLLDPMFGDTSSPFPLFNSKRYSGTFSLEREDLQEIDAIIISHNHYDHL
CCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHEEEEECCCCCCC
NYKSIMQLKDRTKHFYVPTGVAQYLIKWGISPSKISEHNWWDEIAFDNIKLVCTPARHFS
CHHHHHHHHHCCCEEEECHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCEEEEEECCHHCC
GRGMTDRDCSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
CCCCCCCCHHHEEEEEEECCCEEEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCC
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQI
EEEEECCHHHHEEEEEECCCEEEEEECCEEEEEEHHCCCHHHHHHHHHHHCEEEEECCCC
GESITLKSTDYPRYAWWQKV
CCEEEEECCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]