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The map label for this gene is yjhR [C]

Identifier: 227813998

GI number: 227813998

Start: 1283044

End: 1285323

Strand: Direct

Name: yjhR [C]

Synonym: BAMEG_1404

Alternate gene names: 227813998

Gene position: 1283044-1285323 (Clockwise)

Preceding gene: 227813995

Following gene: 227813999

Centisome position: 24.53

GC content: 38.6

Gene sequence:

>2280_bases
ATGAATACACCTACTCAAACTCCTTCATTATCGGAAACGATGAAAGAGTGGCATTATGCATTAGCATATGAAATTAAACA
TTGGAAAACGATAGGTGGTAGTAAAATTTCTATCATGAACGGTCGTTTTTTATATACAGATTATGAAAGTACAGTATATG
TATTTCAGCTTATTTCGGAAGTAAGCTTACCTGAAGGTTCACCCATTCGAATTGAGTTCGATGGTGAGGAAGCGACAGGG
GAAGTATTATCTGTACATGGATTAGAAATAGAACTGAAATTAAATGATTATATACAAGGTGAAATACGAGAAGCTGTTTT
ATACAGTGAACCGTGGCAGCTTTTAGAGCAACTACAAGAGAGGTTGAAGGAAGCGCGTAAAGATAAGCTAAAACGTAATC
GTATAAAGCGTCTTGTTGATGGGACGAGCAGTCCGAAACATATCGAGAAGATGAAAAACCCGAAAAATGAATTGGCGTAT
CGTGCGTTTTACAATCCGACAACGTACGTATGGGGACCACCTGGAACAGGGAAGTCTTACAATTTATCACGCATTATTTC
GGCTCATTATCAAAAAGGAAAGTCGGTACTTGTGTTAGCTCATAGTAACGCCGCAGTGGACGTATTAATGAGTGAAGTAA
CGAAGCAAATTGAAAAGAAAAAGAAATGGACACCTGGCGAAATTGTTCGTTACGGTTATAGTCAACATGAACATATACGA
AATCATGAAACGCTTCTTGCATCGAAGTTAGTTGAAACGACGAACGGATCATGGGGTGAGGAAAGACTCTACTTAGAAGA
AACACGCCAAGAGCTTCGTGAAAAAATCTTATCGTATAAAGCAACATCTGCTGATAAGAAGCGTATGCAGGAGATTGAAA
GTGATCTTCGAAAACAGAGAGCGAAAATTAAAGAAGTAGAAAAAGAATACATTGAAAATGCGAAAGTAATCGGTGCAACT
TTATCGAAATGTGCCATTGATTCACTTATTTATGAGCGTACATTTGATTTAGTTGTCGTAGATGAAGTGAGTATGGCGTT
CGTTCCGCAAATCGCATTAGCTGCTTCACTTGGAAAACGTATCGTCGTTTGTGGTGACTTTTTACAGTTACCTCCAATTG
CGATGGCCAACCATGAACTCGTACGAAAATGGCTCGGCGAAGATATGTTTTACCATGCCGGAATTGTTGAGTCTGTCAAT
AAATCAGAAGCACATCCGAACCTATTTATGCTGCAGGAACAAAGACGTATGCATGCGGATATATCGAAATTTACAAACTC
ATTTATTTATAAAAATAGGGTATATGATCATCCATCAGTTTCAGAACGTAAAGAACTTGCGCAATTGCAGCCATTCGCAA
ATGAAGCTAGTGTTTTATTTGATACGAGCCAAATGGGGGCCTTTTCGTTAAAAGATGCTGCTTCAGGATCTCGTTTTAAC
ATTATGTCTGGTTTAGTAGCAATGCAAATGATGTTAATCGGACTGTTAGATGGTGTGCAATCAATTGGTATTGTGACGCC
TTACAGAGCGCAGTCTCGCTTTTTATCAACGTGTATTAGAGAGATGTTACAGAGAACGAAATATCAAAACATACCAGTTT
TAGCGGCGACAGTTCATAAATTCCAAGGATCTGAAAGAGATATGATGATCTTTGATACGGTTGACAGTTATCCACAAGAA
CGACCTGGCGTTTTATTCTTTGACCATAAAAATCATCGTCTCGTCAACGTTGCTGTGACAAGGGCGAGAGGGAAGTTCAT
TCAATTATCAGATTGTCATTATATGTGTAAAAACCTTTCTAGAAAACAAGCGTTGTCACAATTAACTGCTCATATAGAAC
GCCACGGAGATGTGTATGATCGCACGACATCAAGACAATTGTGGGAGCGAAAAATATCGAAACGATTACGTTGGTTTATG
GAAATGAATCTGGAAGAGCCGAAAGGGCTATTAAAAGATATTTTAGCTGCAAAACGAAAAATCGTGATTTCACTTCCAAG
TACAAAACAAGTGGATAAACGAGTATGGCAAGCGTTAATGCGTACAAATGCGCAAATAACGGTGTATAGTGATGGACCAG
TTCCATTGAAAAATGTAAAGTTACAAAGACAAAATAAAGCATTCCCGTTTATCGTAATCGATGATGAAATCTTTTGGGCA
GGGGCGCCCCTCACATCTCAAATGATGTTTGAAGGCAGTACAGAATTTCCATACGTATGTGCAAGACTGCAAGCACCTGA
GACAATTGGTGTATTAAAAGGATTTTTAGATATTCGGTAA

Upstream 100 bases:

>100_bases
GAAAATTAAGAAAATAAGCAAGATAAAAACCTTACAAATTTTAGCGTGTTATATGGTATAGTGAGAAAGTATGTTTGGGG
AGAAGGAAGGAGATTATACG

Downstream 100 bases:

>100_bases
ATTCGGATAGGAATTCCTTGACTTTTATTTGAAATGAACTTAGAATGAATGTAATTTAATATAATTTTATGAAAATTCTT
ATCACGAGAGGTGGAGGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 759; Mature: 759

Protein sequence:

>759_residues
MNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYESTVYVFQLISEVSLPEGSPIRIEFDGEEATG
EVLSVHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKDKLKRNRIKRLVDGTSSPKHIEKMKNPKNELAY
RAFYNPTTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVRYGYSQHEHIR
NHETLLASKLVETTNGSWGEERLYLEETRQELREKILSYKATSADKKRMQEIESDLRKQRAKIKEVEKEYIENAKVIGAT
LSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLGKRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVN
KSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRFN
IMSGLVAMQMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQE
RPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCKNLSRKQALSQLTAHIERHGDVYDRTTSRQLWERKISKRLRWFM
EMNLEEPKGLLKDILAAKRKIVISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPFIVIDDEIFWA
GAPLTSQMMFEGSTEFPYVCARLQAPETIGVLKGFLDIR

Sequences:

>Translated_759_residues
MNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYESTVYVFQLISEVSLPEGSPIRIEFDGEEATG
EVLSVHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKDKLKRNRIKRLVDGTSSPKHIEKMKNPKNELAY
RAFYNPTTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVRYGYSQHEHIR
NHETLLASKLVETTNGSWGEERLYLEETRQELREKILSYKATSADKKRMQEIESDLRKQRAKIKEVEKEYIENAKVIGAT
LSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLGKRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVN
KSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRFN
IMSGLVAMQMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQE
RPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCKNLSRKQALSQLTAHIERHGDVYDRTTSRQLWERKISKRLRWFM
EMNLEEPKGLLKDILAAKRKIVISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPFIVIDDEIFWA
GAPLTSQMMFEGSTEFPYVCARLQAPETIGVLKGFLDIR
>Mature_759_residues
MNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYESTVYVFQLISEVSLPEGSPIRIEFDGEEATG
EVLSVHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKDKLKRNRIKRLVDGTSSPKHIEKMKNPKNELAY
RAFYNPTTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVRYGYSQHEHIR
NHETLLASKLVETTNGSWGEERLYLEETRQELREKILSYKATSADKKRMQEIESDLRKQRAKIKEVEKEYIENAKVIGAT
LSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLGKRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVN
KSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRFN
IMSGLVAMQMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQE
RPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCKNLSRKQALSQLTAHIERHGDVYDRTTSRQLWERKISKRLRWFM
EMNLEEPKGLLKDILAAKRKIVISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPFIVIDDEIFWA
GAPLTSQMMFEGSTEFPYVCARLQAPETIGVLKGFLDIR

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA2/NAM7 helicase family [H]

Homologues:

Organism=Homo sapiens, GI18375673, Length=426, Percent_Identity=27.4647887323944, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI119392094, Length=474, Percent_Identity=26.5822784810127, Blast_Score=99, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71981659, Length=467, Percent_Identity=25.2676659528908, Blast_Score=99, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17510163, Length=458, Percent_Identity=26.6375545851528, Blast_Score=93, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17533987, Length=382, Percent_Identity=23.8219895287958, Blast_Score=71, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17533985, Length=382, Percent_Identity=23.8219895287958, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322835, Length=498, Percent_Identity=25.5020080321285, Blast_Score=94, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6323726, Length=467, Percent_Identity=24.1970021413276, Blast_Score=85, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6323462, Length=503, Percent_Identity=24.0556660039761, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18859757, Length=454, Percent_Identity=27.0925110132159, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI221330969, Length=471, Percent_Identity=22.9299363057325, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24660647, Length=471, Percent_Identity=22.9299363057325, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR004483 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87172; Mature: 87172

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYESTVYVFQLISE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCEEEEECCCHHHHHHHHHHH
VSLPEGSPIRIEFDGEEATGEVLSVHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQE
HCCCCCCEEEEEECCCCCCCCEEEEECEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHH
RLKEARKDKLKRNRIKRLVDGTSSPKHIEKMKNPKNELAYRAFYNPTTYVWGPPGTGKSY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHEEEEECCCCEEEECCCCCCCCC
NLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVRYGYSQHEHIR
CHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHH
NHETLLASKLVETTNGSWGEERLYLEETRQELREKILSYKATSADKKRMQEIESDLRKQR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AKIKEVEKEYIENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLGKR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHCCCE
IVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFMLQEQRRMHAD
EEEECCHHHCCCCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHH
ISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRFN
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHCCCCCCHH
IMSGLVAMQMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
FQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCKNLS
HCCCCCCEEEEECHHCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEECCHHHHHHCCH
RKQALSQLTAHIERHGDVYDRTTSRQLWERKISKRLRWFMEMNLEEPKGLLKDILAAKRK
HHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCE
IVISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPFIVIDDEIFWA
EEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCEEECCCCCCCEEEECCCEEEC
GAPLTSQMMFEGSTEFPYVCARLQAPETIGVLKGFLDIR
CCCHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYESTVYVFQLISE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCEEEEECCCHHHHHHHHHHH
VSLPEGSPIRIEFDGEEATGEVLSVHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQE
HCCCCCCEEEEEECCCCCCCCEEEEECEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHH
RLKEARKDKLKRNRIKRLVDGTSSPKHIEKMKNPKNELAYRAFYNPTTYVWGPPGTGKSY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHEEEEECCCCEEEECCCCCCCCC
NLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVRYGYSQHEHIR
CHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHH
NHETLLASKLVETTNGSWGEERLYLEETRQELREKILSYKATSADKKRMQEIESDLRKQR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AKIKEVEKEYIENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLGKR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHCCCE
IVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFMLQEQRRMHAD
EEEECCHHHCCCCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHH
ISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRFN
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHCCCCCCHH
IMSGLVAMQMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
FQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCKNLS
HCCCCCCEEEEECHHCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEECCHHHHHHCCH
RKQALSQLTAHIERHGDVYDRTTSRQLWERKISKRLRWFMEMNLEEPKGLLKDILAAKRK
HHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCE
IVISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPFIVIDDEIFWA
EEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCEEECCCCCCCEEEECCCEEEC
GAPLTSQMMFEGSTEFPYVCARLQAPETIGVLKGFLDIR
CCCHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]