Click here to switch to the map view.

The map label for this gene is 227080699

Identifier: 227080699

GI number: 227080699

Start: 505403

End: 507163

Strand: Reverse

Name: 227080699

Synonym: VCM66_0474

Alternate gene names: NA

Gene position: 507163-505403 (Counterclockwise)

Preceding gene: 227080700

Following gene: 227080698

Centisome position: 17.53

GC content: 48.32

Gene sequence:

>1761_bases
ATGCTTTCTACTTCTCCATTTGTTCTGCCACGAAAAACCCCATTTGGTTTAGGTGAACACTTAGCGGAATGGGCAACAGG
ACTGAAACGTCTCAATCAATTCTATGCTCAACGTCCAGCAAGCGGTGATACTCAAGCGTTTTTGCGCTTTACCTTGGATG
TTCTTGGTATCGATTATCAAGTAGTACGCGGCAAGCTCACACATGTTCCAGCTCAAGGGGCAACTATCGTGGTCGCTAAC
CATCCTTTAGGCTGCGTTGAAGGGGTGATTTTGGCTGAGCTGCTGCTTTGCGTTCGCTCAGATGTAAAAATTCTCGCTAA
TCAGTATTTAAAGCTGGTGCCCGAGCTTACCTCACTATTTATCGGCGTCGATGTGTTTGAAGGTGCCGATGCCGCAAAAG
CGAATCTGCATGCCCTTCGTCAAGCGCATAAACACCTTGAGCAAGGTGGGTTGCTACTGATGTTTCCTGCTGGGGAAGTC
TCCCAATTGGTTGACAGCAAGCAAGGTCGTTTGGAGGACAAAGAGTGGAGCCAATCGGTCAGCCGCCTCGTTAAAAAACA
TCAAGCGCATACGGTCCCAGTTTATATTGATGGCCATAACTCAACCCCTTTTTACCTTGCAGGAAAAATTCACCCTATGC
TGCGCACCTTGATGTTGGGGCGCGAGCTGCTCAATAAGCAGCATACTCAAATTGGTATCGCGATTGGTGAGGGGATTTCA
CACAGCGAAGTACAGCATCTTTGTGATCAACAGTTGGTCAATTATCTGCGCCTCAATACCTATCTTTTGCAATCTTCTCC
CGTGCGCAACAAGACCGCCAGTGATCGATCCTTGCCTCCCGTTGCAGAGCGCCTTCCATTAGCCGATCTGCTCGAAGATA
TCGCGCAGTTGCCTTACGCCGACCATATGCTGCGCCATAACCAATTTGATGTGTATTGCACCACAGCGGATAACATTCCT
TCGTTGATGCATGAAATTGGCCGCATTCGCGAGTTGAATTTCCGTGAGGTGGGCGAAGGAACGGGCTGTGCGCTGGATAT
TGATCGATTTGATCGCGATTACCTTCACCTATTCATTTGGGATAGAGAGAAAAATCAGCTGGTGGGCGCATACCGTTTAG
GGCTCGTTGATAAGCTTATTGAGCACAAGGGGATCAGCGGCCTCTACTCCAGTACCCTATTTCATTATGATCAACGCTTC
CTCAATAACATGGGCAATGCGATTGAAATGGGGCGTTCGGTGATTGACAGCCAATATCAAAAAAGCATGGCGGCCCTGCT
TTTGCTTTGGAAAGGCATTGGTACTTATGTCGAACGCCACCCACAATATACCCACCTTTTTGGCCCTGTGAGTATCAGCA
ACGATTACAGTGAACAAGCCAGACGTTTACTCGCCGATACCATGACTCTGCATTATTACGATAGTGAACAAGCCGAGTTA
GTGATGGCCACCAACCCTCTACCTACAGGGCAAGCACAATGGAATGCCAGCCTTTTGACGTCACTTGCCGACTTGCAACT
CCTGTCACGAGTGATTGCTCGGATCGATGAAGGAAAGGGAATTCCGGTGCTACTACGCCAGTATCTAGGATTAAACGGAA
AGCTGGTGAGCTTTAATGTGGATCCTGCGTTCAATAACGCACTAGATGGCTTGATCGTAGTTGATCTTCGCAATGTGCCC
ACGAAAACCTTAGCGCGTTACATGGGGCAATCTGAAGCTCTGCGCTATCTTGCCACCCACCAATATTTCAGCGATATCTA
A

Upstream 100 bases:

>100_bases
GTTCAAGGATATTCCGCGCAACAAAAAGCTCATCAGACTGTCGCGATTTTGCAATATGTAGCCTCTAGCCTCTTGGTAAA
CCATCACATAAGAGGTTGCT

Downstream 100 bases:

>100_bases
CCCATCACGCCAAGGTGCTTCATCTTGGCGTGACCCATCAAACATTTCTGGAATCAAAATAAAATGCTATCGAGTCAAAA
TTTCCTCTCAATATCGCCAG

Product: putative hemolysin

Products: NA

Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Family Protein; Acyltransferase Domain-Containing Protein; Hemolysin A; Acyltransferase; Phosphate Acyltransferase Family Protein; Acyltransferase Protein; DNA Polymerase III Subunit Alpha; Acetyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin; Sulfolipid Biosynthesis Protein SqdA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MLSTSPFVLPRKTPFGLGEHLAEWATGLKRLNQFYAQRPASGDTQAFLRFTLDVLGIDYQVVRGKLTHVPAQGATIVVAN
HPLGCVEGVILAELLLCVRSDVKILANQYLKLVPELTSLFIGVDVFEGADAAKANLHALRQAHKHLEQGGLLLMFPAGEV
SQLVDSKQGRLEDKEWSQSVSRLVKKHQAHTVPVYIDGHNSTPFYLAGKIHPMLRTLMLGRELLNKQHTQIGIAIGEGIS
HSEVQHLCDQQLVNYLRLNTYLLQSSPVRNKTASDRSLPPVAERLPLADLLEDIAQLPYADHMLRHNQFDVYCTTADNIP
SLMHEIGRIRELNFREVGEGTGCALDIDRFDRDYLHLFIWDREKNQLVGAYRLGLVDKLIEHKGISGLYSSTLFHYDQRF
LNNMGNAIEMGRSVIDSQYQKSMAALLLLWKGIGTYVERHPQYTHLFGPVSISNDYSEQARRLLADTMTLHYYDSEQAEL
VMATNPLPTGQAQWNASLLTSLADLQLLSRVIARIDEGKGIPVLLRQYLGLNGKLVSFNVDPAFNNALDGLIVVDLRNVP
TKTLARYMGQSEALRYLATHQYFSDI

Sequences:

>Translated_586_residues
MLSTSPFVLPRKTPFGLGEHLAEWATGLKRLNQFYAQRPASGDTQAFLRFTLDVLGIDYQVVRGKLTHVPAQGATIVVAN
HPLGCVEGVILAELLLCVRSDVKILANQYLKLVPELTSLFIGVDVFEGADAAKANLHALRQAHKHLEQGGLLLMFPAGEV
SQLVDSKQGRLEDKEWSQSVSRLVKKHQAHTVPVYIDGHNSTPFYLAGKIHPMLRTLMLGRELLNKQHTQIGIAIGEGIS
HSEVQHLCDQQLVNYLRLNTYLLQSSPVRNKTASDRSLPPVAERLPLADLLEDIAQLPYADHMLRHNQFDVYCTTADNIP
SLMHEIGRIRELNFREVGEGTGCALDIDRFDRDYLHLFIWDREKNQLVGAYRLGLVDKLIEHKGISGLYSSTLFHYDQRF
LNNMGNAIEMGRSVIDSQYQKSMAALLLLWKGIGTYVERHPQYTHLFGPVSISNDYSEQARRLLADTMTLHYYDSEQAEL
VMATNPLPTGQAQWNASLLTSLADLQLLSRVIARIDEGKGIPVLLRQYLGLNGKLVSFNVDPAFNNALDGLIVVDLRNVP
TKTLARYMGQSEALRYLATHQYFSDI
>Mature_586_residues
MLSTSPFVLPRKTPFGLGEHLAEWATGLKRLNQFYAQRPASGDTQAFLRFTLDVLGIDYQVVRGKLTHVPAQGATIVVAN
HPLGCVEGVILAELLLCVRSDVKILANQYLKLVPELTSLFIGVDVFEGADAAKANLHALRQAHKHLEQGGLLLMFPAGEV
SQLVDSKQGRLEDKEWSQSVSRLVKKHQAHTVPVYIDGHNSTPFYLAGKIHPMLRTLMLGRELLNKQHTQIGIAIGEGIS
HSEVQHLCDQQLVNYLRLNTYLLQSSPVRNKTASDRSLPPVAERLPLADLLEDIAQLPYADHMLRHNQFDVYCTTADNIP
SLMHEIGRIRELNFREVGEGTGCALDIDRFDRDYLHLFIWDREKNQLVGAYRLGLVDKLIEHKGISGLYSSTLFHYDQRF
LNNMGNAIEMGRSVIDSQYQKSMAALLLLWKGIGTYVERHPQYTHLFGPVSISNDYSEQARRLLADTMTLHYYDSEQAEL
VMATNPLPTGQAQWNASLLTSLADLQLLSRVIARIDEGKGIPVLLRQYLGLNGKLVSFNVDPAFNNALDGLIVVDLRNVP
TKTLARYMGQSEALRYLATHQYFSDI

Specific function: Unknown

COG id: COG3176

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65722; Mature: 65722

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTSPFVLPRKTPFGLGEHLAEWATGLKRLNQFYAQRPASGDTQAFLRFTLDVLGIDYQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHH
VVRGKLTHVPAQGATIVVANHPLGCVEGVILAELLLCVRSDVKILANQYLKLVPELTSLF
HHHCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVDVFEGADAAKANLHALRQAHKHLEQGGLLLMFPAGEVSQLVDSKQGRLEDKEWSQSV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCCCHHHHHHH
SRLVKKHQAHTVPVYIDGHNSTPFYLAGKIHPMLRTLMLGRELLNKQHTQIGIAIGEGIS
HHHHHHHCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCC
HSEVQHLCDQQLVNYLRLNTYLLQSSPVRNKTASDRSLPPVAERLPLADLLEDIAQLPYA
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCH
DHMLRHNQFDVYCTTADNIPSLMHEIGRIRELNFREVGEGTGCALDIDRFDRDYLHLFIW
HHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHCCCCCCCEEEHHHCCCCEEEEEEE
DREKNQLVGAYRLGLVDKLIEHKGISGLYSSTLFHYDQRFLNNMGNAIEMGRSVIDSQYQ
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KSMAALLLLWKGIGTYVERHPQYTHLFGPVSISNDYSEQARRLLADTMTLHYYDSEQAEL
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEE
VMATNPLPTGQAQWNASLLTSLADLQLLSRVIARIDEGKGIPVLLRQYLGLNGKLVSFNV
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEC
DPAFNNALDGLIVVDLRNVPTKTLARYMGQSEALRYLATHQYFSDI
CCCHHCCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSTSPFVLPRKTPFGLGEHLAEWATGLKRLNQFYAQRPASGDTQAFLRFTLDVLGIDYQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHH
VVRGKLTHVPAQGATIVVANHPLGCVEGVILAELLLCVRSDVKILANQYLKLVPELTSLF
HHHCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVDVFEGADAAKANLHALRQAHKHLEQGGLLLMFPAGEVSQLVDSKQGRLEDKEWSQSV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCCCHHHHHHH
SRLVKKHQAHTVPVYIDGHNSTPFYLAGKIHPMLRTLMLGRELLNKQHTQIGIAIGEGIS
HHHHHHHCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCC
HSEVQHLCDQQLVNYLRLNTYLLQSSPVRNKTASDRSLPPVAERLPLADLLEDIAQLPYA
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCH
DHMLRHNQFDVYCTTADNIPSLMHEIGRIRELNFREVGEGTGCALDIDRFDRDYLHLFIW
HHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHCCCCCCCEEEHHHCCCCEEEEEEE
DREKNQLVGAYRLGLVDKLIEHKGISGLYSSTLFHYDQRFLNNMGNAIEMGRSVIDSQYQ
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KSMAALLLLWKGIGTYVERHPQYTHLFGPVSISNDYSEQARRLLADTMTLHYYDSEQAEL
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEE
VMATNPLPTGQAQWNASLLTSLADLQLLSRVIARIDEGKGIPVLLRQYLGLNGKLVSFNV
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEC
DPAFNNALDGLIVVDLRNVPTKTLARYMGQSEALRYLATHQYFSDI
CCCHHCCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA