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The map label for this gene is 227080640

Identifier: 227080640

GI number: 227080640

Start: 442145

End: 444709

Strand: Reverse

Name: 227080640

Synonym: VCM66_0414

Alternate gene names: NA

Gene position: 444709-442145 (Counterclockwise)

Preceding gene: 227080641

Following gene: 227080639

Centisome position: 15.37

GC content: 52.71

Gene sequence:

>2565_bases
ATGACGCAGACAACAACACCGTCGCAAGATGTGCAAGAGATGGTGGCGCAAGCAGACACTGGCGCTCGAGCCCCCAAAGG
GCTTCCGGGGCGTGTGCTTTGGTTTGTTCCGCTCTGTTGGTCACTTTTCCAACTTTGGTACGCTTCACCACTCCCCTTTA
TCTTCGACTTCGGCGTACTCAATGATACGCAAGCTCGCTCCATTCACTTAACGTTTGCCGTTTTTCTCGCCTTCACGGCC
TATCCGGCAATGAAAGGTTCGCCGCGCGATCGTATTCCTTTAACCGACTGGCTTTTAGCACTCGCGGGCAGCTTTTCCGC
TGCTTATATCTATCTATTTTACGCCGAGCTCGCAGGACGCTCAGGCGCACCCACTCAGTTTGATGTGATCGCCTCTGTGG
TCGGCATGGTATTACTCCTCGAAGCGACACGCCGGGCATTAGGCCCACCACTGATGATGGTGGCCGCGCTCTTTTTACTT
TACACCTTCGCTGGCCCTTACATGCCCGATGTGATTGCCCACAAAGGGGCGAGCCTAAATAAGGCGATGTCACACTTGTG
GCTCACCACCGAAGGGGTATTTGGTGTCGCACTTGGGGTATCTACCTCATTCGTGTTCCTGTTCGTGCTTTTTGGTGCCA
TGCTGGAGCGGGCTGGCGCGGGCGCTTACTTCATCAAAGTGGCTTTCTCGATGCTTGGGCACATGCGTGGTGGTCCAGCC
AAAGCGGCCGTGGTAGCGTCAGGCCTTTCCGGATTGGTTTCTGGCTCTTCAATCGCCAACGTGGTCACCACGGGAACTTT
CACCATTCCTTTAATGAAACGTGTCGGCTTTCCCGGCACCAAAGCGGGTGCAGTGGAAGTAGCCGCCTCCACCAACGGCC
AACTAACCCCACCGATTATGGGCGCAGCAGCTTTTTTAATGGTGGAATATGTCGGGATTTCCTATGTTGAAGTGATCAAA
GCGGCGATCCTACCCGCACTGATTTCTTATATCGCACTGATTTATATCGTTCACCTTGAAGCGTGTAAGGCGGGCATGAG
TGGTTTACCTCGTCGTCATCAATCGACGGTGGCTCAAAAGCTGCTCTCATTTACCGCCACGATTCTTGGTTTATGCGTGA
TAAGTGCCGTGGTTTATTACGGTATCGGCTGGACTAAAGAAGCCTTTGGCGACGCAGCAACGCCCATCCTCACTGTGGTG
TTATTGGCCGCTTATGTTGGCTTAGTGAAAATATCCGCCCCCTACGCCAAAGAGGGTTTAGGGATTGATGAGAATTTGCA
GTACGTCCCCGATGTCGCCCCGACGTTAAAATCCGGCCTGCACTACTTGCTGCCGATTGTGGTATTGGTGTGGTGTTTGA
CGGTTGAGCGATTCTCGCCCGGCTTATCGGCCTTCTGGGCCAGCGTGTTTATGATTTTCATCCTACTCACGCAACGTCCA
CTGATGGCTCTCTTTAATCGCACGGGTTCACTGGGTGATGCGGCGAAAGAGGGCGTGACTGACCTTTTGGAAAGCTTAGT
CTCAGGTGCCCGCAATATGATCGGTATTGGGGTCGCGACCGCTGCCGCTGGCACAGTCGTGGGGGTAGTTACCCTGACTG
GGATTGGTTTAGTGATGACCGACTTTGTCGAGTTTATCTCTGGCGGTAACTTGATGCTGATGCTGATTTTCACTGCCGTG
ATCAGCTTAATTCTGGGTATGGGCTTACCAACGACCGCCAACTACATCGTGGTTTCCACCTTGATGGCTCCAGTCATTGT
CACTCTAGGCGCTGAGCATGGCTTAATCATCCCACTGATTGCGGTGCATCTGTTCGTATTCTATTTCGGTATTTTGGCCG
ATGATACGCCTCCGGTCGGACTTGCCGCATTTGCCGCGGCGGCGATCGCCAAATCCGACCCGATCCGCACCGGTATCCAA
GGCTTTGCCTACGATATCCGCACCGCGATTTTGCCTTTCATGTTTGTGTTTAATACCCAGTTGCTGCTGATGGGTATTGA
TAGCTGGTGGCACTTAATGCTGACCATACTCTCTTCCATCACCGCCATGTTGCTGTTCTCGGCGGCAACCCAAGGGTGGT
GGTTAACCAAAACCAAATGGTGGGAAGTCGTCGCGCTACTGGTGCTGACCTTCACCTTCTTCCGCCCCGGTTTTTGGTGG
GACATGGTTTATCCCGCGCAAGTCATGTATGCCGGCACTAAGTTAGAGCAGATTGTCGAGCAAGCTCCCGTTGGACAACC
GATCCAGATGATCGTCGCGGGAGAGAATCTTAAAGGCGAATACACCTCTAAAACCGTGCAACTGCCGTTTGAAGATCGCG
CTGTCAGCGCTCAAGAGCGGATCGCCTCAATGGGCTTAACTCTGCTTAATGATAAAAACCGCATGCTAGTAGAAATGGTT
GAGTTTGGCAGCCCAGCCGAAGCAGCGGGCATCGATTTCGATTGGGAAATTCGCTCAGTGGTGGTCGATAGCGATCGACC
AATGAAAGAGTGGGTATTCTTGCCTGCGATTTTGCTGACCTTACTGCTGGCTTGGAACCAAAAAAGACGGATAAAAAAGG
CGTAA

Upstream 100 bases:

>100_bases
TCCTTAGTATCACGTTCACGTTTGGTGATACTACTTTCAGGTACAACACTCTCAGTACCGATGACAAGTCTATGGAACAT
CAATAATAAGGATAAGGTAC

Downstream 100 bases:

>100_bases
CAAGGTGCTACGTCAATATGCCTGAGTCAAATCAGGCATATACTTATCCCGTCAATCAATCATCGCCAACGCATCCCTAA
GACGCATGTTGCGGGATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; C4-Dicarboxylate Anaerobic Carrier; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Inner Membrane Protein; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transporter; 4TM/12TM TRAP Transporter; TRAP Transporter Membrane-Spanning Component; TRAP-Type Transport System

Number of amino acids: Translated: 854; Mature: 853

Protein sequence:

>854_residues
MTQTTTPSQDVQEMVAQADTGARAPKGLPGRVLWFVPLCWSLFQLWYASPLPFIFDFGVLNDTQARSIHLTFAVFLAFTA
YPAMKGSPRDRIPLTDWLLALAGSFSAAYIYLFYAELAGRSGAPTQFDVIASVVGMVLLLEATRRALGPPLMMVAALFLL
YTFAGPYMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPA
KAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIK
AAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYYGIGWTKEAFGDAATPILTVV
LLAAYVGLVKISAPYAKEGLGIDENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERFSPGLSAFWASVFMIFILLTQRP
LMALFNRTGSLGDAAKEGVTDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTAV
ISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQ
GFAYDIRTAILPFMFVFNTQLLLMGIDSWWHLMLTILSSITAMLLFSAATQGWWLTKTKWWEVVALLVLTFTFFRPGFWW
DMVYPAQVMYAGTKLEQIVEQAPVGQPIQMIVAGENLKGEYTSKTVQLPFEDRAVSAQERIASMGLTLLNDKNRMLVEMV
EFGSPAEAAGIDFDWEIRSVVVDSDRPMKEWVFLPAILLTLLLAWNQKRRIKKA

Sequences:

>Translated_854_residues
MTQTTTPSQDVQEMVAQADTGARAPKGLPGRVLWFVPLCWSLFQLWYASPLPFIFDFGVLNDTQARSIHLTFAVFLAFTA
YPAMKGSPRDRIPLTDWLLALAGSFSAAYIYLFYAELAGRSGAPTQFDVIASVVGMVLLLEATRRALGPPLMMVAALFLL
YTFAGPYMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPA
KAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIK
AAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYYGIGWTKEAFGDAATPILTVV
LLAAYVGLVKISAPYAKEGLGIDENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERFSPGLSAFWASVFMIFILLTQRP
LMALFNRTGSLGDAAKEGVTDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTAV
ISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQ
GFAYDIRTAILPFMFVFNTQLLLMGIDSWWHLMLTILSSITAMLLFSAATQGWWLTKTKWWEVVALLVLTFTFFRPGFWW
DMVYPAQVMYAGTKLEQIVEQAPVGQPIQMIVAGENLKGEYTSKTVQLPFEDRAVSAQERIASMGLTLLNDKNRMLVEMV
EFGSPAEAAGIDFDWEIRSVVVDSDRPMKEWVFLPAILLTLLLAWNQKRRIKKA
>Mature_853_residues
TQTTTPSQDVQEMVAQADTGARAPKGLPGRVLWFVPLCWSLFQLWYASPLPFIFDFGVLNDTQARSIHLTFAVFLAFTAY
PAMKGSPRDRIPLTDWLLALAGSFSAAYIYLFYAELAGRSGAPTQFDVIASVVGMVLLLEATRRALGPPLMMVAALFLLY
TFAGPYMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAK
AAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKA
AILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYYGIGWTKEAFGDAATPILTVVL
LAAYVGLVKISAPYAKEGLGIDENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERFSPGLSAFWASVFMIFILLTQRPL
MALFNRTGSLGDAAKEGVTDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTAVI
SLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQG
FAYDIRTAILPFMFVFNTQLLLMGIDSWWHLMLTILSSITAMLLFSAATQGWWLTKTKWWEVVALLVLTFTFFRPGFWWD
MVYPAQVMYAGTKLEQIVEQAPVGQPIQMIVAGENLKGEYTSKTVQLPFEDRAVSAQERIASMGLTLLNDKNRMLVEMVE
FGSPAEAAGIDFDWEIRSVVVDSDRPMKEWVFLPAILLTLLLAWNQKRRIKKA

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92048; Mature: 91917

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCHHHHCCCC
>Mature Secondary Structure 
TQTTTPSQDVQEMVAQADTGARAPKGLPGRVLWFVPLCWSLFQLWYASPLPFIFDFGVL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
NDTQARSIHLTFAVFLAFTAYPAMKGSPRDRIPLTDWLLALAGSFSAAYIYLFYAELAGR
CCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
SGAPTQFDVIASVVGMVLLLEATRRALGPPLMMVAALFLLYTFAGPYMPDVIAHKGASLN
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHH
KAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCH
KAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIM
HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHH
GAAAFLMVEYVGISYVEVIKAAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LLSFTATILGLCVISAVVYYGIGWTKEAFGDAATPILTVVLLAAYVGLVKISAPYAKEGL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
GIDENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERFSPGLSAFWASVFMIFILLTQRP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH
LMALFNRTGSLGDAAKEGVTDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFVEFISGGNLMLMLIFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLI
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
AVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQGFAYDIRTAILPFMFVFNTQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
LLLMGIDSWWHLMLTILSSITAMLLFSAATQGWWLTKTKWWEVVALLVLTFTFFRPGFWW
HHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCCCCEE
DMVYPAQVMYAGTKLEQIVEQAPVGQPIQMIVAGENLKGEYTSKTVQLPFEDRAVSAQER
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHH
IASMGLTLLNDKNRMLVEMVEFGSPAEAAGIDFDWEIRSVVVDSDRPMKEWVFLPAILLT
HHHHCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
LLLAWNQKRRIKKA
HHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA