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The map label for this gene is uspF [H]

Identifier: 227080639

GI number: 227080639

Start: 441586

End: 442023

Strand: Reverse

Name: uspF [H]

Synonym: VCM66_0413

Alternate gene names: 227080639

Gene position: 442023-441586 (Counterclockwise)

Preceding gene: 227080640

Following gene: 227080637

Centisome position: 15.28

GC content: 47.26

Gene sequence:

>438_bases
ATGTATAAACATATTCTTGTTCCGGTTGATTTGAATGAACAAGGCTTTGCCGACAAAGCGGTGCAACTTGCTGTCTGGCA
TGCTAAGCATTCCAATGCCGAAATTCACTTGCTGAACGTGTTGCCTGGTATTCACATGTCCATGGTGGCGACTTATTTTC
CTAAAGACGCGGCCGCGCAGATGAAAAATGATGTGCGAGCACAACTCAAAGCCTTTGCGGAGAAGCACATCGCTGAAGAG
GTGGTGTACAAACTCCACATCGCCGAAGGCAAACCTTACGCCACTATCCTTGATTATGCCGAGCGCTTAGGGGCTGACTT
AATTGTTATGCCAAGCCACAAACGCTCACGCATCGATAAAGTGATGCTCGGCTCCGTGGCCAGTAAAGTGGTAGAAAATT
CGCCTATTAATGTCATGGTCGTCAAACCACAAGGTTAA

Upstream 100 bases:

>100_bases
CTGAGTCAAATCAGGCATATACTTATCCCGTCAATCAATCATCGCCAACGCATCCCTAAGACGCATGTTGCGGGATGACG
AATAAACCCTAGAGAGCGTC

Downstream 100 bases:

>100_bases
TCGGCACTCATCTTCAATCGTTTATTCAAGGCGCATATTGCGCCTTTTTTGTTCACCGATTCCTATCACACTAATTGGTT
TTGCCTGTTTGAATAACTGA

Product: Universal stress protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MYKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQMKNDVRAQLKAFAEKHIAEE
VVYKLHIAEGKPYATILDYAERLGADLIVMPSHKRSRIDKVMLGSVASKVVENSPINVMVVKPQG

Sequences:

>Translated_145_residues
MYKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQMKNDVRAQLKAFAEKHIAEE
VVYKLHIAEGKPYATILDYAERLGADLIVMPSHKRSRIDKVMLGSVASKVVENSPINVMVVKPQG
>Mature_145_residues
MYKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQMKNDVRAQLKAFAEKHIAEE
VVYKLHIAEGKPYATILDYAERLGADLIVMPSHKRSRIDKVMLGSVASKVVENSPINVMVVKPQG

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=145, Percent_Identity=29.6551724137931, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1786824, Length=145, Percent_Identity=33.1034482758621, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16107; Mature: 16107

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQ
CCCEEEEEECCCCCCCCCHHHEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHH
MKNDVRAQLKAFAEKHIAEEVVYKLHIAEGKPYATILDYAERLGADLIVMPSHKRSRIDK
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHH
VMLGSVASKVVENSPINVMVVKPQG
HHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MYKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQ
CCCEEEEEECCCCCCCCCHHHEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHH
MKNDVRAQLKAFAEKHIAEEVVYKLHIAEGKPYATILDYAERLGADLIVMPSHKRSRIDK
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHH
VMLGSVASKVVENSPINVMVVKPQG
HHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]