| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080506
Identifier: 227080506
GI number: 227080506
Start: 285911
End: 286003
Strand: Reverse
Name: 227080506
Synonym: VCM66_0277
Alternate gene names: NA
Gene position: 286003-285911 (Counterclockwise)
Preceding gene: 227080507
Following gene: 227080505
Centisome position: 9.89
GC content: 40.86
Gene sequence:
>93_bases TTGGCAAAACAATTTGCCAATGCTCAAATATTAGTCTTTTCAGGCATCAAAAAAATGCGTAAAATGCGCGCCCTTGCTGG TACGAAGCTGTGA
Upstream 100 bases:
>100_bases ACTTGACCCAATCGCAGAGAAGAGCGAATGGTGCCGCATTTCTGGCCGCAAGCTAGGCTAGATAAGACTTTGCGGCCTAA TTGACTGATAAATCGACTAT
Downstream 100 bases:
>100_bases AGACGTTTTGAAAATCGGAAATCATCAACTTAAGAACAATCTGATCGTCGCCCCGATGGCGGGTGTCACCGACAGACCCT TTCGAGAGTTGTGTTTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 30; Mature: 29
Protein sequence:
>30_residues MAKQFANAQILVFSGIKKMRKMRALAGTKL
Sequences:
>Translated_30_residues MAKQFANAQILVFSGIKKMRKMRALAGTKL >Mature_29_residues AKQFANAQILVFSGIKKMRKMRALAGTKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3352; Mature: 3221
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQFANAQILVFSGIKKMRKMRALAGTKL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKQFANAQILVFSGIKKMRKMRALAGTKL CCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA