| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is mak [H]
Identifier: 227080485
GI number: 227080485
Start: 260401
End: 261381
Strand: Direct
Name: mak [H]
Synonym: VCM66_0255
Alternate gene names: 227080485
Gene position: 260401-261381 (Clockwise)
Preceding gene: 227080484
Following gene: 227080487
Centisome position: 9.0
GC content: 44.24
Gene sequence:
>981_bases GTGCAGCAGGACGTGTCGCGCGAGCATACAATTAATAATGGTTCGAGCATGGCGGACCATGATGAGCATCCCATAGAGCA AAAGGAATTCTACATGCTGATTGGATTGGATATTGGTGGCACAAAAATAGAAATATGTGTGTTAGATAAGCAAGGTAGTA TGCTCTATCGACAGCGTATCGCAACGCCAGATAATTATTCTCAGTTTGTCGATTGTGTCTGTAGTCTGATTGTGGATGCT GAGCAAGCCACCCAACCTGTTGATTCGATTGGTATCGGCCTACCTGGTGCAGTCAGTCCAGTTACTGGCCTGATCAAAAA TGCCAATTGTACCTTCCTCAATGGGCAGGACTTATCAAGTGACTTGCAGTACCGTTTAGGTCGCGAGGTCAAACTAGCTA ACGATGCAAACTGTTTTGCTCTTTCAGAAGCAATCGATGGGGCTGGTAAAGAAAGTATGGTCGTTTTTGGTGCGATACTC GGTACAGGTTGCGGGGGTAGCATTGTAGTTAATCGTCAGGTATTAGTTGGGCCAAATGCCATATGTGGTGAATGGGGGCA TAATCCACTCCCCGGATATCATCTCGAACAGGATGGGGCAGCACGGTACTGTTATTGTGGTCGACAGAATTGTATTGAGA GATTTATTTCAGGAAGTGGTTTTCAGGATAGCTACCAAGCTTTAACGGGTGAATGTATTACCGCTTCAGAAATCATGAAG CGGTATAAGCAACAAGAACCGGAAGCTATACATTGTTATACACAACTAATTGATCACATGGCACGTAGTTTTGCTGGATT AGTTAATGTGCTCGATCCAGATATAATTGTTCTTGGTGGCGGACTTTCTAATATTGATGAGTTGTATCGAGATTTACCCA CTGCAACTGCAAGACATGTGTTTTCTGACTCAGCTCAAGTACATTTTGCAAAAGCAGTATTTGGAGACAGCAGTGGCATT CGTGGTGCAGCTTGGCTTTAG
Upstream 100 bases:
>100_bases GATTGCGATGCTACTTTAGTTAGTCCTTGCGGCACCGTTCTTACAGTACACAAAGGGCAATCGGTCTTTATTCCCGCCTA TACGGAAAAATACTGCTTAA
Downstream 100 bases:
>100_bases CACTGAATAATTCGCAAACGCCCTGTTGATTAATGGGGCATTTACTGAGCAATAATCCCTCAAGCTTATTTCTGCTATTT TGCTTCTTTGTCGACGCCAC
Product: ROK family protein
Products: NA
Alternate protein names: D-fructose kinase; Manno(fructo)kinase [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MQQDVSREHTINNGSSMADHDEHPIEQKEFYMLIGLDIGGTKIEICVLDKQGSMLYRQRIATPDNYSQFVDCVCSLIVDA EQATQPVDSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSEAIDGAGKESMVVFGAIL GTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARYCYCGRQNCIERFISGSGFQDSYQALTGECITASEIMK RYKQQEPEAIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDELYRDLPTATARHVFSDSAQVHFAKAVFGDSSGI RGAAWL
Sequences:
>Translated_326_residues MQQDVSREHTINNGSSMADHDEHPIEQKEFYMLIGLDIGGTKIEICVLDKQGSMLYRQRIATPDNYSQFVDCVCSLIVDA EQATQPVDSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSEAIDGAGKESMVVFGAIL GTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARYCYCGRQNCIERFISGSGFQDSYQALTGECITASEIMK RYKQQEPEAIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDELYRDLPTATARHVFSDSAQVHFAKAVFGDSSGI RGAAWL >Mature_326_residues MQQDVSREHTINNGSSMADHDEHPIEQKEFYMLIGLDIGGTKIEICVLDKQGSMLYRQRIATPDNYSQFVDCVCSLIVDA EQATQPVDSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSEAIDGAGKESMVVFGAIL GTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARYCYCGRQNCIERFISGSGFQDSYQALTGECITASEIMK RYKQQEPEAIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDELYRDLPTATARHVFSDSAQVHFAKAVFGDSSGI RGAAWL
Specific function: Catalyzes the phosphorylation of fructose to fructose-6- P. Has also low level glucokinase activity in vitro. Is not able to phosphorylate D-ribose, D-mannitol, D-sorbitol, inositol, and L-threonine [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=272, Percent_Identity=24.6323529411765, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI190014632, Length=272, Percent_Identity=24.6323529411765, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI298566325, Length=272, Percent_Identity=24.6323529411765, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4885285, Length=272, Percent_Identity=24.6323529411765, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87081733, Length=301, Percent_Identity=47.8405315614618, Blast_Score=290, Evalue=6e-80, Organism=Escherichia coli, GI1787363, Length=299, Percent_Identity=38.7959866220736, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1790522, Length=320, Percent_Identity=24.0625, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786891, Length=280, Percent_Identity=21.7857142857143, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 35290; Mature: 35290
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQDVSREHTINNGSSMADHDEHPIEQKEFYMLIGLDIGGTKIEICVLDKQGSMLYRQRI CCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHC ATPDNYSQFVDCVCSLIVDAEQATQPVDSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSS CCCCCHHHHHHHHHHHHHCCHHHHCCHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCH DLQYRLGREVKLANDANCFALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNA HHHHHCCCEEEECCCCCCEEHHHHHCCCCCCCEEEEEHHHHCCCCCEEEEECEEEECCCH ICGEWGHNPLPGYHLEQDGAARYCYCGRQNCIERFISGSGFQDSYQALTGECITASEIMK HCCCCCCCCCCCCEECCCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHH RYKQQEPEAIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDELYRDLPTATARHV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHH FSDSAQVHFAKAVFGDSSGIRGAAWL HCCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MQQDVSREHTINNGSSMADHDEHPIEQKEFYMLIGLDIGGTKIEICVLDKQGSMLYRQRI CCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHC ATPDNYSQFVDCVCSLIVDAEQATQPVDSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSS CCCCCHHHHHHHHHHHHHCCHHHHCCHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCH DLQYRLGREVKLANDANCFALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNA HHHHHCCCEEEECCCCCCEEHHHHHCCCCCCCEEEEEHHHHCCCCCEEEEECEEEECCCH ICGEWGHNPLPGYHLEQDGAARYCYCGRQNCIERFISGSGFQDSYQALTGECITASEIMK HCCCCCCCCCCCCEECCCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHH RYKQQEPEAIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDELYRDLPTATARHV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHH FSDSAQVHFAKAVFGDSSGIRGAAWL HCCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8807285; 9278503; 1744033 [H]