| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is ftsX [H]
Identifier: 227080384
GI number: 227080384
Start: 138813
End: 139805
Strand: Direct
Name: ftsX [H]
Synonym: VCM66_0149
Alternate gene names: 227080384
Gene position: 138813-139805 (Clockwise)
Preceding gene: 227080383
Following gene: 227080385
Centisome position: 4.8
GC content: 48.74
Gene sequence:
>993_bases ATGGCCGTTAAGCCGGGCAATCAAAAAATCAGCAAAACCACCAAAAGTACCAAAAGCAAACCGCGTGATGTGAAGCGAGC CAAAACCGACAGTTTTCTCGCCATTCATTTCAAACAGGCGAAAGCATCGTTTGCCGCCTTGTGGCGACGTCCACTGGGCA ACATTTTGACTTTGGCGGTAATTTCTATGGCGTTGGCGCTACCCGCCAGTTTGTACTTGCTGAGTAAAAATATCGCCTCG GTGGCTGAGCGAGTGGCTGAGCCTTCTCAGCTCAGTGTTTATCTGCACATCGATACACCAGAACCTCGGATCATCGTTTT GAAAGATGATTTGGAGCGGCGTGATGAAATTGCCAAAGTGAAATACATCTCACCGCAGCAAGGTTTGGATGATTTAAGCC AGTATGCTGGCTTTGAGCAAGCGATCAGCCTACTCGATAACGCCACCTTGCCCGCGGTATTAGTGGTGACGCCTAAAGTG GACAGTCGAGAGCAGATCCAAACGCTTGCCAAAGCCCTACAAGCAGAAGAGGGGGTGACCGATGTGCGCATGGATGAAGA TTGGTTTGCCCGTTTAGATGCGATTCGCCATTTGGCGACTATCGTGGTGATTAGCTTATCCAGCTTGATGTTGATGTCGG TTTTTTTGATTGTGGGCAATACGCTACGTTTTAACGTACAAGCCAACAAAGAAGAAATCCAAACCATGAAACTCATCGGT GCGACCGATGCGTATATTCTGCGTCCTTATCTCTATTCAGGGATGTGGTTTGGTTTACTCGGCGCCGTGGCAGCCTGGCT ATTAACGGCCTTGATGACGATTTTACTCAATGGTGCGGTGGAAGCGCTCGCTCAATTGTATGACAGCCGTTTCCGTTTGA TTGGCCTCGGCTGGGATGAATCATTACTGCTTTTAATGCTCGGCGTCTTTTTAGGCTGCGTGGCGGCGAAAGTGTCGGCG AAACGCCATCTAAAAGAAATTGAACCTGTTTAA
Upstream 100 bases:
>100_bases ACAATACTGCTGGCGACGCACGATATTCATTTGGTGAATTCGCGTCCGCAATATCGTCATCTAGAACTCAATCAGGGTTT TTTAAGTGAGGTAGCGGATT
Downstream 100 bases:
>100_bases GTGATGGTGGTCATAAATGGGTGGCTGATTCAAGGTTGAGGCAGTGCTTGACTTGAGTTGCCCTTTTGTTTATGCATAAT GACAAGTCAAACTTGAAACC
Product: cell division protein FtsX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MAVKPGNQKISKTTKSTKSKPRDVKRAKTDSFLAIHFKQAKASFAALWRRPLGNILTLAVISMALALPASLYLLSKNIAS VAERVAEPSQLSVYLHIDTPEPRIIVLKDDLERRDEIAKVKYISPQQGLDDLSQYAGFEQAISLLDNATLPAVLVVTPKV DSREQIQTLAKALQAEEGVTDVRMDEDWFARLDAIRHLATIVVISLSSLMLMSVFLIVGNTLRFNVQANKEEIQTMKLIG ATDAYILRPYLYSGMWFGLLGAVAAWLLTALMTILLNGAVEALAQLYDSRFRLIGLGWDESLLLLMLGVFLGCVAAKVSA KRHLKEIEPV
Sequences:
>Translated_330_residues MAVKPGNQKISKTTKSTKSKPRDVKRAKTDSFLAIHFKQAKASFAALWRRPLGNILTLAVISMALALPASLYLLSKNIAS VAERVAEPSQLSVYLHIDTPEPRIIVLKDDLERRDEIAKVKYISPQQGLDDLSQYAGFEQAISLLDNATLPAVLVVTPKV DSREQIQTLAKALQAEEGVTDVRMDEDWFARLDAIRHLATIVVISLSSLMLMSVFLIVGNTLRFNVQANKEEIQTMKLIG ATDAYILRPYLYSGMWFGLLGAVAAWLLTALMTILLNGAVEALAQLYDSRFRLIGLGWDESLLLLMLGVFLGCVAAKVSA KRHLKEIEPV >Mature_329_residues AVKPGNQKISKTTKSTKSKPRDVKRAKTDSFLAIHFKQAKASFAALWRRPLGNILTLAVISMALALPASLYLLSKNIASV AERVAEPSQLSVYLHIDTPEPRIIVLKDDLERRDEIAKVKYISPQQGLDDLSQYAGFEQAISLLDNATLPAVLVVTPKVD SREQIQTLAKALQAEEGVTDVRMDEDWFARLDAIRHLATIVVISLSSLMLMSVFLIVGNTLRFNVQANKEEIQTMKLIGA TDAYILRPYLYSGMWFGLLGAVAAWLLTALMTILLNGAVEALAQLYDSRFRLIGLGWDESLLLLMLGVFLGCVAAKVSAK RHLKEIEPV
Specific function: Not Known. Is Coded In An Operon Essential For Cell Division. [C]
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789872, Length=321, Percent_Identity=34.8909657320872, Blast_Score=191, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004513 - InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 36475; Mature: 36344
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKPGNQKISKTTKSTKSKPRDVKRAKTDSFLAIHFKQAKASFAALWRRPLGNILTLAV CCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH ISMALALPASLYLLSKNIASVAERVAEPSQLSVYLHIDTPEPRIIVLKDDLERRDEIAKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHH KYISPQQGLDDLSQYAGFEQAISLLDNATLPAVLVVTPKVDSREQIQTLAKALQAEEGVT EECCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC DVRMDEDWFARLDAIRHLATIVVISLSSLMLMSVFLIVGNTLRFNVQANKEEIQTMKLIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC ATDAYILRPYLYSGMWFGLLGAVAAWLLTALMTILLNGAVEALAQLYDSRFRLIGLGWDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH SLLLLMLGVFLGCVAAKVSAKRHLKEIEPV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AVKPGNQKISKTTKSTKSKPRDVKRAKTDSFLAIHFKQAKASFAALWRRPLGNILTLAV CCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH ISMALALPASLYLLSKNIASVAERVAEPSQLSVYLHIDTPEPRIIVLKDDLERRDEIAKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHH KYISPQQGLDDLSQYAGFEQAISLLDNATLPAVLVVTPKVDSREQIQTLAKALQAEEGVT EECCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC DVRMDEDWFARLDAIRHLATIVVISLSSLMLMSVFLIVGNTLRFNVQANKEEIQTMKLIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC ATDAYILRPYLYSGMWFGLLGAVAAWLLTALMTILLNGAVEALAQLYDSRFRLIGLGWDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH SLLLLMLGVFLGCVAAKVSAKRHLKEIEPV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]