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The map label for this gene is bioB [H]

Identifier: 226951035

GI number: 226951035

Start: 4093029

End: 4094075

Strand: Direct

Name: bioB [H]

Synonym: CLM_4074

Alternate gene names: 226951035

Gene position: 4093029-4094075 (Clockwise)

Preceding gene: 226951034

Following gene: 226951036

Centisome position: 98.5

GC content: 29.7

Gene sequence:

>1047_bases
ATGAAAAAAATTATTGATGAACTATATGAAAGAAACAATACCTCAAATGATAAACTTTTATATTTACTTAACAATATTGA
TAAAGAAAATAAAAAATATCTAATATATAAAGCTCATGAAACTAGTTTAAAGCACTATAATAACAAAGTTTATTTAAGGG
GATTAATAGAATTTACAAACTATTGTAAAAATGCTTGTCTATATTGTGGTATATCTTGTAATAATAACAATGCTGAAAGA
TATAGACTATCTGAAGAAGAAATACTTAACTGTTGCAAGAAAGGCTACTCTTTAGGCTATAGAACTTTTGTACTCCAAGG
TGGAGAAGACCCTTACTATACAGATAATAAAATTATTGACATTATAAAATCTATAAAAAAATTATTTCCAAACTGTGCTG
TAACATTATCTATTGGCGAAAAAAGCTACGAAACATATAAAAAATTTTATGACGCAGGGGCAGATAGATATTTACTAAGG
CATGAAACTGCTTCTAAAAATCTATACGAAAAACTTCATCCTGATATGAGTTTTGAAAATAGACGCTCATGCTTAAAAAA
CTTAAAAAAAATAGGCTATCAAGTTGGTGCTGGTTTCATGATAGGACTACCTAACCAAACAAATGAAGACTATGTAAATG
ACTTGATATTTTTAAAAGAATTAAAACCTCATATGGTTGGTATAGGTCCTTTTATTCCTCATAAAGACACTGTACTTAAA
AATCAATCTGCTGGTACATTAGAAGATACTACCACATTATTAGCTCTTATAAGGTTGCTTTTACCTGAGGTTTTACTACC
AGCAACTACAGCTCTAGGAACAATAAATCCTATGGGACGGGAAGCAGGTTTAAAAGCTGGGGCTAATGTGGTTATGCCAA
ATCTTTCTCCCACTAACGTTAGAGATAAATATATGCTATATGATAATAAGATTTGTACTGGTGATGAAGCTGCAGAGTGT
AGGAAGTGCATAGAAAATAGAATTAATAATTCTGGTTTTTCTCTAGATTTAACTAGAGGAGATAATATTTTATGGAGGCG
AATATAA

Upstream 100 bases:

>100_bases
TAACTGGAACTCTAGATGAAATTAATAGCCTTACAGGTAAATTAGGAAATCTAGAAAATGTATATGTAAAGACATCTGTA
TCAAAGAAAGAAATATAATT

Downstream 100 bases:

>100_bases
ATGTTTATAAATCATGATTATATAGAAAATTTATTAAAAGAGGCTGAAAATGCTACAAATGAAGATATAGAAAAGGTTTT
AGATAAAGCCTGTAGTAAGG

Product: biotin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKKIIDELYERNNTSNDKLLYLLNNIDKENKKYLIYKAHETSLKHYNNKVYLRGLIEFTNYCKNACLYCGISCNNNNAER
YRLSEEEILNCCKKGYSLGYRTFVLQGGEDPYYTDNKIIDIIKSIKKLFPNCAVTLSIGEKSYETYKKFYDAGADRYLLR
HETASKNLYEKLHPDMSFENRRSCLKNLKKIGYQVGAGFMIGLPNQTNEDYVNDLIFLKELKPHMVGIGPFIPHKDTVLK
NQSAGTLEDTTTLLALIRLLLPEVLLPATTALGTINPMGREAGLKAGANVVMPNLSPTNVRDKYMLYDNKICTGDEAAEC
RKCIENRINNSGFSLDLTRGDNILWRRI

Sequences:

>Translated_348_residues
MKKIIDELYERNNTSNDKLLYLLNNIDKENKKYLIYKAHETSLKHYNNKVYLRGLIEFTNYCKNACLYCGISCNNNNAER
YRLSEEEILNCCKKGYSLGYRTFVLQGGEDPYYTDNKIIDIIKSIKKLFPNCAVTLSIGEKSYETYKKFYDAGADRYLLR
HETASKNLYEKLHPDMSFENRRSCLKNLKKIGYQVGAGFMIGLPNQTNEDYVNDLIFLKELKPHMVGIGPFIPHKDTVLK
NQSAGTLEDTTTLLALIRLLLPEVLLPATTALGTINPMGREAGLKAGANVVMPNLSPTNVRDKYMLYDNKICTGDEAAEC
RKCIENRINNSGFSLDLTRGDNILWRRI
>Mature_348_residues
MKKIIDELYERNNTSNDKLLYLLNNIDKENKKYLIYKAHETSLKHYNNKVYLRGLIEFTNYCKNACLYCGISCNNNNAER
YRLSEEEILNCCKKGYSLGYRTFVLQGGEDPYYTDNKIIDIIKSIKKLFPNCAVTLSIGEKSYETYKKFYDAGADRYLLR
HETASKNLYEKLHPDMSFENRRSCLKNLKKIGYQVGAGFMIGLPNQTNEDYVNDLIFLKELKPHMVGIGPFIPHKDTVLK
NQSAGTLEDTTTLLALIRLLLPEVLLPATTALGTINPMGREAGLKAGANVVMPNLSPTNVRDKYMLYDNKICTGDEAAEC
RKCIENRINNSGFSLDLTRGDNILWRRI

Specific function: Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism [H]

COG id: COG0502

COG function: function code H; Biotin synthase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Biotin synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR010722
- InterPro:   IPR002684
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06968 BATS; PF04055 Radical_SAM [H]

EC number: =2.8.1.6 [H]

Molecular weight: Translated: 39813; Mature: 39813

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIDELYERNNTSNDKLLYLLNNIDKENKKYLIYKAHETSLKHYNNKVYLRGLIEFTN
CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHCCCEEEEHHHHHHHH
YCKNACLYCGISCNNNNAERYRLSEEEILNCCKKGYSLGYRTFVLQGGEDPYYTDNKIID
HHCCCCEEEEEEECCCCHHHEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHH
IIKSIKKLFPNCAVTLSIGEKSYETYKKFYDAGADRYLLRHETASKNLYEKLHPDMSFEN
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCHHH
RRSCLKNLKKIGYQVGAGFMIGLPNQTNEDYVNDLIFLKELKPHMVGIGPFIPHKDTVLK
HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCCHHCC
NQSAGTLEDTTTLLALIRLLLPEVLLPATTALGTINPMGREAGLKAGANVVMPNLSPTNV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEECCCCCCCC
RDKYMLYDNKICTGDEAAECRKCIENRINNSGFSLDLTRGDNILWRRI
CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEECC
>Mature Secondary Structure
MKKIIDELYERNNTSNDKLLYLLNNIDKENKKYLIYKAHETSLKHYNNKVYLRGLIEFTN
CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHCCCEEEEHHHHHHHH
YCKNACLYCGISCNNNNAERYRLSEEEILNCCKKGYSLGYRTFVLQGGEDPYYTDNKIID
HHCCCCEEEEEEECCCCHHHEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHH
IIKSIKKLFPNCAVTLSIGEKSYETYKKFYDAGADRYLLRHETASKNLYEKLHPDMSFEN
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCHHH
RRSCLKNLKKIGYQVGAGFMIGLPNQTNEDYVNDLIFLKELKPHMVGIGPFIPHKDTVLK
HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCCHHCC
NQSAGTLEDTTTLLALIRLLLPEVLLPATTALGTINPMGREAGLKAGANVVMPNLSPTNV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEECCCCCCCC
RDKYMLYDNKICTGDEAAECRKCIENRINNSGFSLDLTRGDNILWRRI
CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA