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The map label for this gene is ktrC [H]

Identifier: 226950563

GI number: 226950563

Start: 3576557

End: 3577219

Strand: Reverse

Name: ktrC [H]

Synonym: CLM_3540

Alternate gene names: 226950563

Gene position: 3577219-3576557 (Counterclockwise)

Preceding gene: 226950564

Following gene: 226950562

Centisome position: 86.09

GC content: 31.83

Gene sequence:

>663_bases
ATGGGAAAAAAGCAATTTGTTGTCATAGGCCTTGGAAGATTTGGTACTTCCGTTGCAAAAACTTTATATACTTTAGGAAA
TGATGTATTGGCTATCGATTCGAGTGATGATATAGTTCAGAGTATATCAGATAGTGTTACTCACTCAGTACAAATGAATG
CTACAGATGAAAATAGTTTAAGAGCTTTAGGAATAAGAAATTTTGATGTGGCTGTTATAACTATAGGATCAGATATACAG
GCTAGTACTATGGCTACCTTACTAGTAAAAGAAATGGGAGTAAAATATATAATAGCTAAGGCAAATACTGAGATACATGC
TAAAGTATTATATAAAATAGGAGCAGATAGAGTAGTATTCCCAGAACGAGATATGGGAGTTAGAGTTGCTCATAATTTAG
TTTCTACTAATATATTAGATTATATAGAATTGTCTCCGAATTATAGCATAGCAGAAATAGTAATTCCAAAGATATGGCAT
GGAAAAACTCTTAACGAATTGAATATAAGAGCTAATTATGGTATTAATGTAGTTGCTTTAAAAAGAGGAGAAGAAATTAA
TGTATCCCCAGTGGCAGAAGACACAATAGAGTCAGGAGATATAATAGTTGCTATAGGAAGTGAAGAAGATCTTACTAAGG
TAGAAATTTTGAATGTAGACTAA

Upstream 100 bases:

>100_bases
GTTGGGCCATTAACATTAGCTATAGCTTTTGCAAGAAAGCTAAAAAATAGTTCTATTAAATATCCAGAAGAAAAAATATT
AGTAGGTTAGAGGTGTTATT

Downstream 100 bases:

>100_bases
TAATTAATGCTGATTTTAAAAATATGAATTAATTTATTACTAAAGTTTAATTTATTAGTCTAAATTAAAATGAGGTGCAT
TATATAAGAAATGATTTCTA

Product: TrkA family potassium uptake protein

Products: NA

Alternate protein names: K(+)-uptake protein ktrC; ORF4 [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGKKQFVVIGLGRFGTSVAKTLYTLGNDVLAIDSSDDIVQSISDSVTHSVQMNATDENSLRALGIRNFDVAVITIGSDIQ
ASTMATLLVKEMGVKYIIAKANTEIHAKVLYKIGADRVVFPERDMGVRVAHNLVSTNILDYIELSPNYSIAEIVIPKIWH
GKTLNELNIRANYGINVVALKRGEEINVSPVAEDTIESGDIIVAIGSEEDLTKVEILNVD

Sequences:

>Translated_220_residues
MGKKQFVVIGLGRFGTSVAKTLYTLGNDVLAIDSSDDIVQSISDSVTHSVQMNATDENSLRALGIRNFDVAVITIGSDIQ
ASTMATLLVKEMGVKYIIAKANTEIHAKVLYKIGADRVVFPERDMGVRVAHNLVSTNILDYIELSPNYSIAEIVIPKIWH
GKTLNELNIRANYGINVVALKRGEEINVSPVAEDTIESGDIIVAIGSEEDLTKVEILNVD
>Mature_219_residues
GKKQFVVIGLGRFGTSVAKTLYTLGNDVLAIDSSDDIVQSISDSVTHSVQMNATDENSLRALGIRNFDVAVITIGSDIQA
STMATLLVKEMGVKYIIAKANTEIHAKVLYKIGADRVVFPERDMGVRVAHNLVSTNILDYIELSPNYSIAEIVIPKIWHG
KTLNELNIRANYGINVVALKRGEEINVSPVAEDTIESGDIIVAIGSEEDLTKVEILNVD

Specific function: Catalytic subunit of the KtrCD potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 23913; Mature: 23782

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKQFVVIGLGRFGTSVAKTLYTLGNDVLAIDSSDDIVQSISDSVTHSVQMNATDENSL
CCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHEEEEECCCCCCCE
RALGIRNFDVAVITIGSDIQASTMATLLVKEMGVKYIIAKANTEIHAKVLYKIGADRVVF
EEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCEEEC
PERDMGVRVAHNLVSTNILDYIELSPNYSIAEIVIPKIWHGKTLNELNIRANYGINVVAL
CCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEEECEECCCCCCEEEEEECCCEEEEEE
KRGEEINVSPVAEDTIESGDIIVAIGSEEDLTKVEILNVD
ECCCCCCCCCCCHHHCCCCCEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure 
GKKQFVVIGLGRFGTSVAKTLYTLGNDVLAIDSSDDIVQSISDSVTHSVQMNATDENSL
CCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHEEEEECCCCCCCE
RALGIRNFDVAVITIGSDIQASTMATLLVKEMGVKYIIAKANTEIHAKVLYKIGADRVVF
EEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCEEEC
PERDMGVRVAHNLVSTNILDYIELSPNYSIAEIVIPKIWHGKTLNELNIRANYGINVVAL
CCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEEECEECCCCCCEEEEEECCCEEEEEE
KRGEEINVSPVAEDTIESGDIIVAIGSEEDLTKVEILNVD
ECCCCCCCCCCCHHHCCCCCEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969500; 9384377 [H]