| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226950559
Identifier: 226950559
GI number: 226950559
Start: 3570983
End: 3571573
Strand: Reverse
Name: 226950559
Synonym: CLM_3536
Alternate gene names: NA
Gene position: 3571573-3570983 (Counterclockwise)
Preceding gene: 226950560
Following gene: 226950557
Centisome position: 85.95
GC content: 25.72
Gene sequence:
>591_bases ATGAATATTATAACGGTTAAAATAAACGGTGTTGAATATAATTTAAAAGGAGAAGAACAAGAGGATTATCTTCACAAAGT GGCTAGATATGTGGATAAAAAGATAGCAGACATACTAGAAAACAATCCTAAATTAAGTACTTCTTCAGCTTCTATATTGA CAGCAATAAATGCTATAGATGAGGGACTAAAAAAAGAAGAACAAATAGAAAATTTACAATTAGAAATAGATAAACTAAAA AAAGTACAGCATCATCAAAATTTAAAAGTAGAAGAAATAAGAAATTTATTAGCAGAAGAAAAGGAAAAGAATAAAGATTT AGAAGCGCAGGACGTAGATGATTCTGCAAAAGAATATAAAGAAAAACTGGAGAAATTACAAGTACAAATGGAACTTATGG AGAAAACTGCAAAGAAATACATGGAAGAAAATAATAAAATTAAAATTCAAAATAAGGAACTAAAATTTCAATTACAATCT TCTAAATATAAAGTTTTAGATCTAGAAAAAAAATTAATGGACAGTCAATTAACTTTGGCTAAAGAAAAGAAAAAATTAAA TCCACTACAGGTAAAAGATATGAAAAAGTAA
Upstream 100 bases:
>100_bases ACTAATTATACTAAAATTTAAAGATAAAATAATAAATCCTATTTTCGTAAATAGTAGTTCAAATAACATTTATAATAGGA ATATCTAAGAGGGTGTATTC
Downstream 100 bases:
>100_bases ATAAAAAATAGCCGTACACACTTATGTTAATGTGTGTACGGTTATTTTTTTATAATAAGTGTTACTAAAATAAACGTACC ATTTAAAATTATTTGCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAIDEGLKKEEQIENLQLEIDKLK KVQHHQNLKVEEIRNLLAEEKEKNKDLEAQDVDDSAKEYKEKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQS SKYKVLDLEKKLMDSQLTLAKEKKKLNPLQVKDMKK
Sequences:
>Translated_196_residues MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAIDEGLKKEEQIENLQLEIDKLK KVQHHQNLKVEEIRNLLAEEKEKNKDLEAQDVDDSAKEYKEKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQS SKYKVLDLEKKLMDSQLTLAKEKKKLNPLQVKDMKK >Mature_196_residues MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAIDEGLKKEEQIENLQLEIDKLK KVQHHQNLKVEEIRNLLAEEKEKNKDLEAQDVDDSAKEYKEKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQS SKYKVLDLEKKLMDSQLTLAKEKKKLNPLQVKDMKK
Specific function: Unknown
COG id: COG3027
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22969; Mature: 22969
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAID CEEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EGLKKEEQIENLQLEIDKLKKVQHHQNLKVEEIRNLLAEEKEKNKDLEAQDVDDSAKEYK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH EKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQSSKYKVLDLEKKLMDSQLTLA HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHH KEKKKLNPLQVKDMKK HHHHCCCCCCCCCCCC >Mature Secondary Structure MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAID CEEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EGLKKEEQIENLQLEIDKLKKVQHHQNLKVEEIRNLLAEEKEKNKDLEAQDVDDSAKEYK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH EKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQSSKYKVLDLEKKLMDSQLTLA HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHH KEKKKLNPLQVKDMKK HHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA