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The map label for this gene is 226950447

Identifier: 226950447

GI number: 226950447

Start: 3451696

End: 3452703

Strand: Reverse

Name: 226950447

Synonym: CLM_3422

Alternate gene names: NA

Gene position: 3452703-3451696 (Counterclockwise)

Preceding gene: 226950448

Following gene: 226950446

Centisome position: 83.09

GC content: 24.7

Gene sequence:

>1008_bases
ATGGCTACATATTATCCTAAAAAGGATTATTTAGTTAGTTTAGTAGCAAATTATAAATTTAATGAAACAAGTGGTACAGT
ATGTTTAGATTCAAAAGGTACTTATAACGGAACATATATGGGTACTACTAACGTTACTGATATATCACAAGGAATAAGTA
ACACTTATAGAACTTTTAACGGAATAAATGATTATATTGCATTTAATAATCAAATAATACCCATAGGCAAGAAAAGTATT
AAGTTTAAAATAAAAACAACAACAACCTCATCATCATTTATTATAAATAATAGTGGGGGAGCTACTGCTAATTATGGATT
TTTATTAGGAATCAATAATTCAGAAGGTGATGGAAAAGTAGCTGTAAATATTAGTAAAAGTACATCAGGATCGTATAATT
TAATTCTTATTTCAAACAAGACAGTTTGTGATGGAAATTGGCATACGGTGTTATTTACTTGGGATGGTACTACGAGTACA
AATTCAGCAAAACTTTATATAGATGATTTAATAAATGAAGATGTTGCAGGAACACCATTAGTAACAGAAACGATAAATGC
AAGTTATAATTTGTTTGTTGGTAAAACAGGAAATCCAAGCTCTCCATATTACTTTTTTAACGGTTCTCTTGATGAAATAG
AAATATACAATGAAGTTATAGAATTTACAGCAAATAAATATATAATTCAAGATAAAAACAATAATTTATATACATTAAAT
AAAAGCAATAATTTATATACATTAAATAAAAGCAATTTAGTACAGGCTCCATTACAAACATTAGATGAAAGTAACTTTAT
AGATAATGGATTTACCGATATCAATCTAATAACTAAAAATTTATTATTAAGTAAATTTGAAAACTTAGAAGAAATTAAGT
TACTTGTATATACAGATGATTTAGAAAAAAATAAATGTGAAATGATTTATAATTGTGAATTCTTTAGACCAATAGATAAA
TTAAAGAAAAATAGTGATATTTGTAATATATTATTTAAGGAAGTATAA

Upstream 100 bases:

>100_bases
AAGATGTTAAAGGAACTGATAAGGGGAGTTTGGGTAATGGTAAGTTATTTGAAATACTCTTTAGTAATGATTTTTTAAGC
ATAGGTGAGGTGAAATAAAG

Downstream 100 bases:

>100_bases
GAGGTGATATGAGATGTCTACAATAGGACAACAATTACTCCAACCTGAAAGTGGATGGAAAAGGTATGATGATACCAATA
TTAATTTTGAATACAAAGGT

Product: cell adhesion domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MATYYPKKDYLVSLVANYKFNETSGTVCLDSKGTYNGTYMGTTNVTDISQGISNTYRTFNGINDYIAFNNQIIPIGKKSI
KFKIKTTTTSSSFIINNSGGATANYGFLLGINNSEGDGKVAVNISKSTSGSYNLILISNKTVCDGNWHTVLFTWDGTTST
NSAKLYIDDLINEDVAGTPLVTETINASYNLFVGKTGNPSSPYYFFNGSLDEIEIYNEVIEFTANKYIIQDKNNNLYTLN
KSNNLYTLNKSNLVQAPLQTLDESNFIDNGFTDINLITKNLLLSKFENLEEIKLLVYTDDLEKNKCEMIYNCEFFRPIDK
LKKNSDICNILFKEV

Sequences:

>Translated_335_residues
MATYYPKKDYLVSLVANYKFNETSGTVCLDSKGTYNGTYMGTTNVTDISQGISNTYRTFNGINDYIAFNNQIIPIGKKSI
KFKIKTTTTSSSFIINNSGGATANYGFLLGINNSEGDGKVAVNISKSTSGSYNLILISNKTVCDGNWHTVLFTWDGTTST
NSAKLYIDDLINEDVAGTPLVTETINASYNLFVGKTGNPSSPYYFFNGSLDEIEIYNEVIEFTANKYIIQDKNNNLYTLN
KSNNLYTLNKSNLVQAPLQTLDESNFIDNGFTDINLITKNLLLSKFENLEEIKLLVYTDDLEKNKCEMIYNCEFFRPIDK
LKKNSDICNILFKEV
>Mature_334_residues
ATYYPKKDYLVSLVANYKFNETSGTVCLDSKGTYNGTYMGTTNVTDISQGISNTYRTFNGINDYIAFNNQIIPIGKKSIK
FKIKTTTTSSSFIINNSGGATANYGFLLGINNSEGDGKVAVNISKSTSGSYNLILISNKTVCDGNWHTVLFTWDGTTSTN
SAKLYIDDLINEDVAGTPLVTETINASYNLFVGKTGNPSSPYYFFNGSLDEIEIYNEVIEFTANKYIIQDKNNNLYTLNK
SNNLYTLNKSNLVQAPLQTLDESNFIDNGFTDINLITKNLLLSKFENLEEIKLLVYTDDLEKNKCEMIYNCEFFRPIDKL
KKNSDICNILFKEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37512; Mature: 37381

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50025 LAM_G_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYYPKKDYLVSLVANYKFNETSGTVCLDSKGTYNGTYMGTTNVTDISQGISNTYRTFN
CCCCCCCHHHEEEEEECCEECCCCCEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHC
GINDYIAFNNQIIPIGKKSIKFKIKTTTTSSSFIINNSGGATANYGFLLGINNSEGDGKV
CCCCEEEECCEEEECCCCEEEEEEEEECCCCEEEEECCCCCEECCEEEEEECCCCCCCEE
AVNISKSTSGSYNLILISNKTVCDGNWHTVLFTWDGTTSTNSAKLYIDDLINEDVAGTPL
EEEEECCCCCCEEEEEEECCEEECCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCE
VTETINASYNLFVGKTGNPSSPYYFFNGSLDEIEIYNEVIEFTANKYIIQDKNNNLYTLN
EEEECCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEE
KSNNLYTLNKSNLVQAPLQTLDESNFIDNGFTDINLITKNLLLSKFENLEEIKLLVYTDD
CCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
LEKNKCEMIYNCEFFRPIDKLKKNSDICNILFKEV
CCCCCCCEEEECHHHCCHHHHHCCCCHHHHHECCC
>Mature Secondary Structure 
ATYYPKKDYLVSLVANYKFNETSGTVCLDSKGTYNGTYMGTTNVTDISQGISNTYRTFN
CCCCCCHHHEEEEEECCEECCCCCEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHC
GINDYIAFNNQIIPIGKKSIKFKIKTTTTSSSFIINNSGGATANYGFLLGINNSEGDGKV
CCCCEEEECCEEEECCCCEEEEEEEEECCCCEEEEECCCCCEECCEEEEEECCCCCCCEE
AVNISKSTSGSYNLILISNKTVCDGNWHTVLFTWDGTTSTNSAKLYIDDLINEDVAGTPL
EEEEECCCCCCEEEEEEECCEEECCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCE
VTETINASYNLFVGKTGNPSSPYYFFNGSLDEIEIYNEVIEFTANKYIIQDKNNNLYTLN
EEEECCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEE
KSNNLYTLNKSNLVQAPLQTLDESNFIDNGFTDINLITKNLLLSKFENLEEIKLLVYTDD
CCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
LEKNKCEMIYNCEFFRPIDKLKKNSDICNILFKEV
CCCCCCCEEEECHHHCCHHHHHCCCCHHHHHECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA