Click here to switch to the map view.

The map label for this gene is 226950429

Identifier: 226950429

GI number: 226950429

Start: 3434990

End: 3435247

Strand: Reverse

Name: 226950429

Synonym: CLM_3401

Alternate gene names: NA

Gene position: 3435247-3434990 (Counterclockwise)

Preceding gene: 226950430

Following gene: 226950428

Centisome position: 82.67

GC content: 26.74

Gene sequence:

>258_bases
ATGAAAAGTCCAGATAAAAATAAAAGTTTATTAGGAGTTTTTATACTATTAGGGGCTATTTTAGGTAGCATTGCTGGTGA
AATATTAGGTTCTAGCTTTACTAAGTTATCCTTTTTAAAAACCGCATATAAAGTAGGAACTACTTCGCCACTGAATTTAG
ACCTAAAAGTTTTAAATTTAGCTATAGGTTTAAATTTTGATATTAATATTATGACTATAATGGGTATAGTATTGGCAATA
ATATTATACAGGAAATAA

Upstream 100 bases:

>100_bases
TTCAGATGCTTATTTTTTGCTTAAAAAATTTTTTAGAGACTTGTTTAAGTTTTTATTAAATGATAAACTATACTAGATAT
AATTTTAAGGTGGGGTTGTT

Downstream 100 bases:

>100_bases
TAGGAAGTGATATCAGTGAAAAATATTATATTAGCTTCTGCATCTGAAAGACGACAAGAGCTTTTAAAAAGAATATTGGA
AGATTTTCAGATTATAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKSPDKNKSLLGVFILLGAILGSIAGEILGSSFTKLSFLKTAYKVGTTSPLNLDLKVLNLAIGLNFDINIMTIMGIVLAI
ILYRK

Sequences:

>Translated_85_residues
MKSPDKNKSLLGVFILLGAILGSIAGEILGSSFTKLSFLKTAYKVGTTSPLNLDLKVLNLAIGLNFDINIMTIMGIVLAI
ILYRK
>Mature_85_residues
MKSPDKNKSLLGVFILLGAILGSIAGEILGSSFTKLSFLKTAYKVGTTSPLNLDLKVLNLAIGLNFDINIMTIMGIVLAI
ILYRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9126; Mature: 9126

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPDKNKSLLGVFILLGAILGSIAGEILGSSFTKLSFLKTAYKVGTTSPLNLDLKVLNL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEE
AIGLNFDINIMTIMGIVLAIILYRK
ECCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSPDKNKSLLGVFILLGAILGSIAGEILGSSFTKLSFLKTAYKVGTTSPLNLDLKVLNL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEE
AIGLNFDINIMTIMGIVLAIILYRK
ECCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA